RNA–Protein interactions for RNA: ENSMUST00000086198.4

Ncapd3-202, Transcript of Condensin-2 complex subunit D3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ncapd3, Length 4,675 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncapd3-202ENSMUST00000086198 Ercc6F8VPZ5 1481 aa13.34□□□□□ -0.27
Ncapd3-202ENSMUST00000086198 Clstn2Q9ER65 966 aa13.31□□□□□ -0.28
Ncapd3-202ENSMUST00000086198 Calr4Q3TQS0 420 aa13.29□□□□□ -0.28
Ncapd3-202ENSMUST00000086198 Ccdc18Q640L5 1455 aa13.28□□□□□ -0.28
Ncapd3-202ENSMUST00000086198 Atp1b4Q99ME6 356 aa13.26□□□□□ -0.29
Ncapd3-202ENSMUST00000086198 Ppp4r2Q0VGB7 417 aa13.25□□□□□ -0.29
Ncapd3-202ENSMUST00000086198 Gtf3c3Q3TMP1 882 aa13.25□□□□□ -0.29
Ncapd3-202ENSMUST00000086198 Chic2Q9D9G3 165 aa13.24□□□□□ -0.29
Ncapd3-202ENSMUST00000086198 Zbtb4Q5F293 982 aa13.23□□□□□ -0.29
Ncapd3-202ENSMUST00000086198 Nlrp6Q91WS2 869 aa13.22□□□□□ -0.29
Ncapd3-202ENSMUST00000086198 Eea1Q8BL66 1411 aa13.21□□□□□ -0.29
Ncapd3-202ENSMUST00000086198 Pds5bQ4VA53 1446 aaKnown RBP13.21□□□□□ -0.3
Ncapd3-202ENSMUST00000086198 Gm13695A2AK44 830 aa13.21□□□□□ -0.3
Ncapd3-202ENSMUST00000086198 Wdr43Q6ZQL4 677 aaKnown RBP13.2□□□□□ -0.3
Ncapd3-202ENSMUST00000086198 Upf2A2AT37 1269 aaKnown RBP13.2□□□□□ -0.3
Ncapd3-202ENSMUST00000086198 Crybg2B7ZCC2 1516 aa13.12□□□□□ -0.31
Ncapd3-202ENSMUST00000086198 BccipQ9CWI3 316 aa13.11□□□□□ -0.31
Ncapd3-202ENSMUST00000086198 SafbD3YXK2 937 aaKnown RBP13.1□□□□□ -0.31
Ncapd3-202ENSMUST00000086198 Sycp2Q9CUU3 1500 aa13.1□□□□□ -0.31
Ncapd3-202ENSMUST00000086198 Taok2Q6ZQ29 1240 aa13.09□□□□□ -0.31
Ncapd3-202ENSMUST00000086198 Prdm10Q3UTQ7 1184 aa13.08□□□□□ -0.32
Ncapd3-202ENSMUST00000086198 CatipB9EKE5 520 aa13.06□□□□□ -0.32
Ncapd3-202ENSMUST00000086198 AU015836B2RUM3 263 aa13.05□□□□□ -0.32
Ncapd3-202ENSMUST00000086198 Arhgap27A2AB59 869 aa13.05□□□□□ -0.32
Ncapd3-202ENSMUST00000086198 Fmn1Q05860 1466 aa13.05□□□□□ -0.32
Ncapd3-202ENSMUST00000086198 Znf316Q6PGE4 1016 aa13.03□□□□□ -0.32
Ncapd3-202ENSMUST00000086198 Mrs2Q5NCE8 434 aa13.02□□□□□ -0.32
Ncapd3-202ENSMUST00000086198 Lmod3E9QA62 571 aa13.01□□□□□ -0.33
Ncapd3-202ENSMUST00000086198 Plcd4Q8K3R3 807 aa13□□□□□ -0.33
Ncapd3-202ENSMUST00000086198 Polr3glQ8R0C0 218 aa13□□□□□ -0.33
Ncapd3-202ENSMUST00000086198 Tnnt2P50752 301 aa12.99□□□□□ -0.33
Ncapd3-202ENSMUST00000086198 Plppr3Q7TPB0 716 aa12.99□□□□□ -0.33
Ncapd3-202ENSMUST00000086198 Rgl3Q3UYI5 709 aa12.98□□□□□ -0.33
Ncapd3-202ENSMUST00000086198 Mia2Q91ZV0 1396 aa12.98□□□□□ -0.33
Ncapd3-202ENSMUST00000086198 Ccdc88bQ4QRL3 1481 aa12.97□□□□□ -0.33
Ncapd3-202ENSMUST00000086198 Mtus2Q3UHD3 1353 aa12.96□□□□□ -0.33
Ncapd3-202ENSMUST00000086198 Safb2Q80YR5 991 aaKnown RBP12.96□□□□□ -0.33
Ncapd3-202ENSMUST00000086198 CftrP26361 1476 aa12.95□□□□□ -0.34
Ncapd3-202ENSMUST00000086198 Cep162Q6ZQ06 1403 aa12.95□□□□□ -0.34
Ncapd3-202ENSMUST00000086198 Aebp2Q9Z248 504 aaKnown RBP12.95□□□□□ -0.34
Ncapd3-202ENSMUST00000086198 Gtf3c5Q8R2T8 520 aa12.94□□□□□ -0.34
Ncapd3-202ENSMUST00000086198 Fgd1P52734 960 aa12.93□□□□□ -0.34
Ncapd3-202ENSMUST00000086198 Trim44Q9QXA7 346 aa12.92□□□□□ -0.34
Ncapd3-202ENSMUST00000086198 Znf326O88291 580 aa12.92□□□□□ -0.34
Ncapd3-202ENSMUST00000086198 Supt16hQ920B9 1047 aa12.92□□□□□ -0.34
Ncapd3-202ENSMUST00000086198 Cwc22Q8C5N3 908 aaKnown RBP12.91□□□□□ -0.34
Ncapd3-202ENSMUST00000086198 Rtn4Q99P72 1162 aaKnown RBP12.91□□□□□ -0.34
Ncapd3-202ENSMUST00000086198 Kif27Q7M6Z4 1394 aa12.9□□□□□ -0.34
Ncapd3-202ENSMUST00000086198 Atad2bE9Q166 1460 aaKnown RBP12.89□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 Mroh3A0A1D5RM54 893 aa12.89□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 Rrp7aQ9D1C9 280 aaKnown RBP12.89□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 CanxP35564 591 aaKnown RBP12.87□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 Phldb1Q6PDH0 1371 aaKnown RBP12.87□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 Rad21Q61550 635 aaKnown RBP12.86□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 IqubQ8CDK3 788 aa12.86□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 Dnttip2Q8R2M2 758 aaKnown RBP12.86□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 Smarca2Q6DIC0 1577 aa12.85□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 Card11Q8CIS0 1159 aa12.85□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 Cux2P70298 1426 aa12.85□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 Aebp1Q640N1 1128 aa12.85□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 Srpk2O54781 681 aaKnown RBP12.85□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 Ipo4Q8VI75 1082 aa12.85□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 Grwd1Q810D6 446 aaKnown RBP12.84□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 P3h3Q8CG70 732 aa12.84□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 Cecr2E9Q2Z1 1453 aa12.84□□□□□ -0.35
Ncapd3-202ENSMUST00000086198 Kdm2aP59997 1161 aa12.82□□□□□ -0.36
Ncapd3-202ENSMUST00000086198 CntlnA2AM05 1397 aa12.81□□□□□ -0.36
Ncapd3-202ENSMUST00000086198 Pdcl3Q8BVF2 240 aa12.8□□□□□ -0.36
Ncapd3-202ENSMUST00000086198 Fyco1Q8VDC1 1437 aa12.8□□□□□ -0.36
Ncapd3-202ENSMUST00000086198 Gm20521D3Z5F7 333 aa12.8□□□□□ -0.36
Ncapd3-202ENSMUST00000086198 ScribQ80U72 1612 aa12.8□□□□□ -0.36
Ncapd3-202ENSMUST00000086198 ArxO35085 564 aa12.77□□□□□ -0.36
Ncapd3-202ENSMUST00000086198 Carmil1Q6EDY6 1374 aa12.77□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Baz1bQ9Z277 1479 aa12.76□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Ipo9Q91YE6 1041 aa12.76□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Htatsf1Q8BGC0 757 aa12.76□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Map4P27546 1125 aaKnown RBP12.75□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 4933402E13RikQ9D4D2 429 aa12.74□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Exosc9Q9JHI7 438 aaKnown RBP12.74□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Ofd1Q80Z25 1017 aa12.74□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Smarca4Q3TKT4 1613 aaKnown RBP12.74□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Rpap1Q80TE0 1409 aa12.74□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 AknaQ80VW7 1404 aa12.73□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Nolc1E9Q5C9 702 aaKnown RBP12.72□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Pkd2O35245 966 aa12.72□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Hspa5P20029 655 aaKnown RBP12.72□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Synj1Q8CHC4 1574 aa12.72□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Dhx57Q6P5D3 1388 aaKnown RBP12.72□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Zfp777B9EKF4 885 aa12.72□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 LrpprcQ6PB66 1392 aaKnown RBP12.72□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Rangap1P46061 589 aaKnown RBP12.71□□□□□ -0.37
Ncapd3-202ENSMUST00000086198 Rrp12Q6P5B0 1295 aaKnown RBP12.7□□□□□ -0.38
Ncapd3-202ENSMUST00000086198 Stk24Q99KH8 431 aa12.7□□□□□ -0.38
Ncapd3-202ENSMUST00000086198 Arhgap35Q91YM2 1499 aa12.69□□□□□ -0.38
Ncapd3-202ENSMUST00000086198 Cabp1Q9JLK7 227 aa12.68□□□□□ -0.38
Ncapd3-202ENSMUST00000086198 Lemd3Q9WU40 921 aa12.68□□□□□ -0.38
Ncapd3-202ENSMUST00000086198 Stag3O70576 1240 aa12.66□□□□□ -0.38
Ncapd3-202ENSMUST00000086198 Ppm1gQ61074 542 aa12.66□□□□□ -0.38
Ncapd3-202ENSMUST00000086198 Podxl2Q8CAE9 603 aa12.66□□□□□ -0.38
Ncapd3-202ENSMUST00000086198 Rrp9Q91WM3 475 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms