RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Kdm5dQ62240 1548 aa25.34■■□□□ 1.65
Upf1-201ENSMUST00000075666 ArxO35085 564 aa25.29■■□□□ 1.64
Upf1-201ENSMUST00000075666 Gm13697A2AK42 830 aa25.26■■□□□ 1.63
Upf1-201ENSMUST00000075666 Rad21Q61550 635 aaKnown RBP25.26■■□□□ 1.63
Upf1-201ENSMUST00000075666 Ofd1Q80Z25 1017 aa25.25■■□□□ 1.63
Upf1-201ENSMUST00000075666 Supt16hQ920B9 1047 aa25.25■■□□□ 1.63
Upf1-201ENSMUST00000075666 Cep162Q6ZQ06 1403 aa25.23■■□□□ 1.63
Upf1-201ENSMUST00000075666 CanxP35564 591 aaKnown RBP25.18■■□□□ 1.62
Upf1-201ENSMUST00000075666 Hspa5P20029 655 aaKnown RBP25.17■■□□□ 1.62
Upf1-201ENSMUST00000075666 Nlrp6Q91WS2 869 aa25.15■■□□□ 1.62
Upf1-201ENSMUST00000075666 Nolc1E9Q5C9 702 aaKnown RBP25.1■■□□□ 1.61
Upf1-201ENSMUST00000075666 Slc4a3P16283 1227 aa25.08■■□□□ 1.61
Upf1-201ENSMUST00000075666 Polr3glQ8R0C0 218 aa25.07■■□□□ 1.6
Upf1-201ENSMUST00000075666 Irx3P81067 507 aa25.07■■□□□ 1.6
Upf1-201ENSMUST00000075666 Wwc2Q6NXJ0 1187 aa25.05■■□□□ 1.6
Upf1-201ENSMUST00000075666 Prdm10Q3UTQ7 1184 aa25■■□□□ 1.59
Upf1-201ENSMUST00000075666 Sin3aQ60520 1274 aaKnown RBP25■■□□□ 1.59
Upf1-201ENSMUST00000075666 Rgl3Q3UYI5 709 aa24.98■■□□□ 1.59
Upf1-201ENSMUST00000075666 Mia2Q91ZV0 1396 aa24.97■■□□□ 1.59
Upf1-201ENSMUST00000075666 Tcerg1Q8CGF7 1100 aaKnown RBP24.96■■□□□ 1.59
Upf1-201ENSMUST00000075666 Erich6D3Z6S9 713 aa24.92■■□□□ 1.58
Upf1-201ENSMUST00000075666 Fmn1Q05860 1466 aa24.9■■□□□ 1.58
Upf1-201ENSMUST00000075666 Trim30dE9PWL0 497 aa24.9■■□□□ 1.58
Upf1-201ENSMUST00000075666 Smarca2Q6DIC0 1577 aa24.9■■□□□ 1.58
Upf1-201ENSMUST00000075666 Baz1bQ9Z277 1479 aa24.88■■□□□ 1.57
Upf1-201ENSMUST00000075666 Crybg2B7ZCC2 1516 aa24.87■■□□□ 1.57
Upf1-201ENSMUST00000075666 Cwc22Q8C5N3 908 aaKnown RBP24.87■■□□□ 1.57
Upf1-201ENSMUST00000075666 Hsp90ab1P11499 724 aaKnown RBP24.86■■□□□ 1.57
Upf1-201ENSMUST00000075666 Ipo9Q91YE6 1041 aa24.84■■□□□ 1.57
Upf1-201ENSMUST00000075666 Exoc6Q8R313 802 aa24.83■■□□□ 1.57
Upf1-201ENSMUST00000075666 Kif15Q6P9L6 1387 aa24.81■■□□□ 1.56
Upf1-201ENSMUST00000075666 Ppm1gQ61074 542 aa24.79■■□□□ 1.56
Upf1-201ENSMUST00000075666 PrkcshO08795 521 aa24.79■■□□□ 1.56
Upf1-201ENSMUST00000075666 Rapgef2Q8CHG7 1496 aa24.79■■□□□ 1.56
Upf1-201ENSMUST00000075666 Card11Q8CIS0 1159 aa24.79■■□□□ 1.56
Upf1-201ENSMUST00000075666 Grwd1Q810D6 446 aaKnown RBP24.77■■□□□ 1.56
Upf1-201ENSMUST00000075666 Znf710Q3U288 666 aa24.75■■□□□ 1.55
Upf1-201ENSMUST00000075666 Ccdc18Q640L5 1455 aa24.75■■□□□ 1.55
Upf1-201ENSMUST00000075666 Hdac5Q9Z2V6 1113 aa24.75■■□□□ 1.55
Upf1-201ENSMUST00000075666 Fkbp15Q6P9Q6 1216 aaKnown RBP24.74■■□□□ 1.55
Upf1-201ENSMUST00000075666 B4galnt3Q6L8S8 986 aa24.73■■□□□ 1.55
Upf1-201ENSMUST00000075666 Dbr1Q923B1 550 aa24.73■■□□□ 1.55
Upf1-201ENSMUST00000075666 Ubl4bQ9CQ84 188 aa24.73■■□□□ 1.55
Upf1-201ENSMUST00000075666 Cecr2E9Q2Z1 1453 aa24.73■■□□□ 1.55
Upf1-201ENSMUST00000075666 Htatsf1Q8BGC0 757 aa24.72■■□□□ 1.55
Upf1-201ENSMUST00000075666 CftrP26361 1476 aa24.72■■□□□ 1.55
Upf1-201ENSMUST00000075666 Apbb1Q9QXJ1 710 aa24.7■■□□□ 1.54
Upf1-201ENSMUST00000075666 Gm13695A2AK44 830 aa24.69■■□□□ 1.54
Upf1-201ENSMUST00000075666 Smg6P61406 1418 aaKnown RBP24.69■■□□□ 1.54
Upf1-201ENSMUST00000075666 Rangap1P46061 589 aaKnown RBP24.66■■□□□ 1.54
Upf1-201ENSMUST00000075666 Ifnlr1Q8CGK5 535 aa24.65■■□□□ 1.54
Upf1-201ENSMUST00000075666 Trim44Q9QXA7 346 aa24.65■■□□□ 1.54
Upf1-201ENSMUST00000075666 Clstn2Q9ER65 966 aa24.64■■□□□ 1.54
Upf1-201ENSMUST00000075666 DekQ7TNV0 380 aaKnown RBP24.64■■□□□ 1.53
Upf1-201ENSMUST00000075666 Gtf3c3Q3TMP1 882 aa24.63■■□□□ 1.53
Upf1-201ENSMUST00000075666 Pkd2O35245 966 aa24.6■■□□□ 1.53
Upf1-201ENSMUST00000075666 Synj1Q8CHC4 1574 aa24.6■■□□□ 1.53
Upf1-201ENSMUST00000075666 Arhgap35Q91YM2 1499 aa24.58■■□□□ 1.53
Upf1-201ENSMUST00000075666 Vsig10D3YX43 558 aa24.56■■□□□ 1.52
Upf1-201ENSMUST00000075666 Dnai1Q8C0M8 701 aa24.56■■□□□ 1.52
Upf1-201ENSMUST00000075666 Fyco1Q8VDC1 1437 aa24.54■■□□□ 1.52
Upf1-201ENSMUST00000075666 Chmp5Q9D7S9 219 aa24.54■■□□□ 1.52
Upf1-201ENSMUST00000075666 AU015836B2RUM3 263 aa24.54■■□□□ 1.52
Upf1-201ENSMUST00000075666 Mbd3Q9Z2D8 285 aaKnown RBP24.54■■□□□ 1.52
Upf1-201ENSMUST00000075666 Sycp2Q9CUU3 1500 aa24.53■■□□□ 1.52
Upf1-201ENSMUST00000075666 Trim26Q99PN3 545 aa24.53■■□□□ 1.52
Upf1-201ENSMUST00000075666 Mphosph9A6H5Y1 991 aa24.52■■□□□ 1.52
Upf1-201ENSMUST00000075666 Neurod2Q62414 383 aa24.52■■□□□ 1.52
Upf1-201ENSMUST00000075666 Spryd3E9Q9B3 442 aa24.51■■□□□ 1.51
Upf1-201ENSMUST00000075666 ChgaP26339 463 aaKnown RBP24.51■■□□□ 1.51
Upf1-201ENSMUST00000075666 Rundc1Q0VDN7 615 aa24.5■■□□□ 1.51
Upf1-201ENSMUST00000075666 ScribQ80U72 1612 aa24.49■■□□□ 1.51
Upf1-201ENSMUST00000075666 Rwdd1Q9CQK7 243 aa24.48■■□□□ 1.51
Upf1-201ENSMUST00000075666 Plcb2A3KGF7 1181 aa24.47■■□□□ 1.51
Upf1-201ENSMUST00000075666 CntlnA2AM05 1397 aa24.46■■□□□ 1.51
Upf1-201ENSMUST00000075666 Zscan21Q07231 555 aa24.46■■□□□ 1.51
Upf1-201ENSMUST00000075666 Aebp1Q640N1 1128 aa24.46■■□□□ 1.51
Upf1-201ENSMUST00000075666 Arid4bA2CG63 1314 aaKnown RBP24.45■■□□□ 1.51
Upf1-201ENSMUST00000075666 Mtus2Q3UHD3 1353 aa24.45■■□□□ 1.5
Upf1-201ENSMUST00000075666 Atp1b4Q99ME6 356 aa24.44■■□□□ 1.5
Upf1-201ENSMUST00000075666 EspnQ9ET47 871 aa24.44■■□□□ 1.5
Upf1-201ENSMUST00000075666 Mak16Q8BGS0 296 aaKnown RBP24.44■■□□□ 1.5
Upf1-201ENSMUST00000075666 Dnttip2Q8R2M2 758 aaKnown RBP24.39■■□□□ 1.49
Upf1-201ENSMUST00000075666 Pak3Q61036 559 aa24.36■■□□□ 1.49
Upf1-201ENSMUST00000075666 Ythdc1E9Q5K9 736 aaKnown RBP24.35■■□□□ 1.49
Upf1-201ENSMUST00000075666 Kdm2aP59997 1161 aa24.35■■□□□ 1.49
Upf1-201ENSMUST00000075666 Cabp1Q9JLK7 227 aa24.35■■□□□ 1.49
Upf1-201ENSMUST00000075666 Armcx1Q9CX83 456 aa24.34■■□□□ 1.49
Upf1-201ENSMUST00000075666 Ncapd3Q6ZQK0 1506 aa24.34■■□□□ 1.49
Upf1-201ENSMUST00000075666 Lmod3E9QA62 571 aa24.34■■□□□ 1.49
Upf1-201ENSMUST00000075666 Mroh3A0A1D5RM54 893 aa24.31■■□□□ 1.48
Upf1-201ENSMUST00000075666 Washc2Q6PGL7 1334 aa24.28■■□□□ 1.48
Upf1-201ENSMUST00000075666 Kif27Q7M6Z4 1394 aa24.27■■□□□ 1.48
Upf1-201ENSMUST00000075666 PtmaP26350 111 aa24.27■■□□□ 1.48
Upf1-201ENSMUST00000075666 Fhad1A6PWD2 1420 aa24.26■■□□□ 1.47
Upf1-201ENSMUST00000075666 Ipo8Q7TMY7 1010 aa24.25■■□□□ 1.47
Upf1-201ENSMUST00000075666 Speer4f1Q9D5Q6 258 aa24.23■■□□□ 1.47
Upf1-201ENSMUST00000075666 Trak1Q6PD31 939 aa24.23■■□□□ 1.47
Upf1-201ENSMUST00000075666 Ankrd36D3Z4K0 1415 aa24.21■■□□□ 1.47
Upf1-201ENSMUST00000075666 Plcd4Q8K3R3 807 aa24.19■■□□□ 1.46
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms