RNA–Protein interactions for RNA: ENSMUST00000067284.9

Cpsf3-201, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf3, Length 2,499 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-201ENSMUST00000067284 Ubl4bQ9CQ84 188 aa14.11□□□□□ -0.15
Cpsf3-201ENSMUST00000067284 Ankrd26Q811D2 1581 aa14.09□□□□□ -0.15
Cpsf3-201ENSMUST00000067284 TonslQ6NZL6 1363 aa14.08□□□□□ -0.16
Cpsf3-201ENSMUST00000067284 Tiam1Q60610 1591 aa14.06□□□□□ -0.16
Cpsf3-201ENSMUST00000067284 Npm1Q61937 292 aaKnown RBP14.05□□□□□ -0.16
Cpsf3-201ENSMUST00000067284 Erich3F6QRE9 1637 aa14.05□□□□□ -0.16
Cpsf3-201ENSMUST00000067284 Eid3Q3V124 375 aa14.04□□□□□ -0.16
Cpsf3-201ENSMUST00000067284 Kdm5bQ80Y84 1544 aa14.04□□□□□ -0.16
Cpsf3-201ENSMUST00000067284 Naip1Q9QWK5 1403 aa14.04□□□□□ -0.16
Cpsf3-201ENSMUST00000067284 Pcf11G3X9Z4 1553 aa14.03□□□□□ -0.16
Cpsf3-201ENSMUST00000067284 Slx4Q6P1D7 1565 aa14.02□□□□□ -0.16
Cpsf3-201ENSMUST00000067284 BlmO88700 1416 aa14.02□□□□□ -0.17
Cpsf3-201ENSMUST00000067284 Cux1P53564 1515 aa14.02□□□□□ -0.17
Cpsf3-201ENSMUST00000067284 LrpprcQ6PB66 1392 aaKnown RBP14.01□□□□□ -0.17
Cpsf3-201ENSMUST00000067284 Duox2A2AQ99 1517 aa14□□□□□ -0.17
Cpsf3-201ENSMUST00000067284 ClspnQ80YR7 1315 aa13.99□□□□□ -0.17
Cpsf3-201ENSMUST00000067284 Lmod2Q3UHZ5 550 aa13.99□□□□□ -0.17
Cpsf3-201ENSMUST00000067284 Efcab5A0JP43 1406 aa13.98□□□□□ -0.17
Cpsf3-201ENSMUST00000067284 PogzQ8BZH4 1409 aaKnown RBP13.98□□□□□ -0.17
Cpsf3-201ENSMUST00000067284 Lmo7E9PYF4 1699 aaKnown RBP13.98□□□□□ -0.17
Cpsf3-201ENSMUST00000067284 Fam135aQ6NS59 1506 aa13.97□□□□□ -0.17
Cpsf3-201ENSMUST00000067284 Samd9lQ69Z37 1561 aa13.95□□□□□ -0.18
Cpsf3-201ENSMUST00000067284 Carmil1Q6EDY6 1374 aa13.94□□□□□ -0.18
Cpsf3-201ENSMUST00000067284 Rad54l2Q99NG0 1466 aa13.91□□□□□ -0.18
Cpsf3-201ENSMUST00000067284 TchhA0A0B4J1F9 1599 aa13.9□□□□□ -0.18
Cpsf3-201ENSMUST00000067284 Urb2E9Q7L1 1524 aaKnown RBP13.9□□□□□ -0.18
Cpsf3-201ENSMUST00000067284 Dhx29Q6PGC1 1365 aaKnown RBP13.9□□□□□ -0.18
Cpsf3-201ENSMUST00000067284 3425401B19RikD3Z1D3 1412 aa13.89□□□□□ -0.19
Cpsf3-201ENSMUST00000067284 Fam50aQ9WV03 339 aaKnown RBP13.89□□□□□ -0.19
Cpsf3-201ENSMUST00000067284 SynmQ70IV5 1561 aa13.88□□□□□ -0.19
Cpsf3-201ENSMUST00000067284 CntlnA2AM05 1397 aa13.86□□□□□ -0.19
Cpsf3-201ENSMUST00000067284 Aebp1Q640N1 1128 aa13.84□□□□□ -0.19
Cpsf3-201ENSMUST00000067284 Nop58Q6DFW4 536 aaKnown RBP13.84□□□□□ -0.19
Cpsf3-201ENSMUST00000067284 Kif21aQ9QXL2 1672 aa13.82□□□□□ -0.2
Cpsf3-201ENSMUST00000067284 Cdk11bP24788 784 aaKnown RBP13.82□□□□□ -0.2
Cpsf3-201ENSMUST00000067284 Fyco1Q8VDC1 1437 aa13.82□□□□□ -0.2
Cpsf3-201ENSMUST00000067284 Amer1Q7TS75 1132 aa13.82□□□□□ -0.2
Cpsf3-201ENSMUST00000067284 Dnajc5bQ9CQ94 199 aa13.81□□□□□ -0.2
Cpsf3-201ENSMUST00000067284 Gm1043A0A140LJC2 1431 aa13.81□□□□□ -0.2
Cpsf3-201ENSMUST00000067284 Crocc2F6XLV1 1638 aa13.79□□□□□ -0.2
Cpsf3-201ENSMUST00000067284 Peg3Q3URU2 1571 aa13.79□□□□□ -0.2
Cpsf3-201ENSMUST00000067284 Gm7298A0A0N4SVU1 1476 aa13.76□□□□□ -0.21
Cpsf3-201ENSMUST00000067284 Pla2r1Q62028 1487 aa13.76□□□□□ -0.21
Cpsf3-201ENSMUST00000067284 EprsQ8CGC7 1512 aaKnown RBP13.75□□□□□ -0.21
Cpsf3-201ENSMUST00000067284 Polr1aO35134 1717 aaKnown RBP13.75□□□□□ -0.21
Cpsf3-201ENSMUST00000067284 Mapk8ip2Q9ERE9 830 aa13.74□□□□□ -0.21
Cpsf3-201ENSMUST00000067284 Magi3Q9EQJ9 1476 aa13.72□□□□□ -0.21
Cpsf3-201ENSMUST00000067284 Rtl5Q5DTT4 599 aa13.72□□□□□ -0.21
Cpsf3-201ENSMUST00000067284 Hspa5P20029 655 aaKnown RBP13.71□□□□□ -0.21
Cpsf3-201ENSMUST00000067284 Mrc2Q64449 1479 aa13.71□□□□□ -0.21
Cpsf3-201ENSMUST00000067284 Gpatch8A2A6A1 1505 aa13.7□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 CadpsQ80TJ1 1355 aa13.7□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 Naip2Q9QUK4 1447 aa13.7□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 A2mQ6GQT1 1474 aa13.7□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 Setd1bQ8CFT2 1985 aa13.7□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 Fhad1A6PWD2 1420 aa13.69□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 Plb1Q3TTY0 1478 aa13.69□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 Chic2Q9D9G3 165 aa13.69□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 Rpap1Q80TE0 1409 aa13.68□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 Ccnb3Q810T2 1396 aa13.68□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 Abca5Q8K448 1642 aa13.67□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 WizO88286 1684 aaKnown RBP13.67□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 Grin2aP35436 1464 aa13.67□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 Dennd4bQ3U1Y4 1499 aa13.66□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 Vps8Q0P5W1 1427 aa13.66□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 Mia2Q91ZV0 1396 aa13.65□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 Disp1Q3TDN0 1521 aa13.65□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 PrkcshO08795 521 aa13.65□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 NclP09405 707 aaKnown RBP13.65□□□□□ -0.22
Cpsf3-201ENSMUST00000067284 Kif27Q7M6Z4 1394 aa13.63□□□□□ -0.23
Cpsf3-201ENSMUST00000067284 PxdnQ3UQ28 1475 aa13.62□□□□□ -0.23
Cpsf3-201ENSMUST00000067284 BC005561E9Q5E2 1589 aa13.62□□□□□ -0.23
Cpsf3-201ENSMUST00000067284 Lmtk2Q3TYD6 1471 aa13.62□□□□□ -0.23
Cpsf3-201ENSMUST00000067284 Adamts12Q811B3 1600 aa13.61□□□□□ -0.23
Cpsf3-201ENSMUST00000067284 NexmifQ5DTT1 1515 aa13.6□□□□□ -0.23
Cpsf3-201ENSMUST00000067284 Ankrd36D3Z4K0 1415 aa13.6□□□□□ -0.23
Cpsf3-201ENSMUST00000067284 Ube2uB1AUC4 352 aa13.59□□□□□ -0.23
Cpsf3-201ENSMUST00000067284 Tnnt3Q9QZ47 272 aa13.59□□□□□ -0.23
Cpsf3-201ENSMUST00000067284 Fam71e1A1L3C1 212 aa13.58□□□□□ -0.23
Cpsf3-201ENSMUST00000067284 UacaQ8CGB3 1411 aa13.58□□□□□ -0.23
Cpsf3-201ENSMUST00000067284 Ccer2J3QPU5 274 aa13.57□□□□□ -0.24
Cpsf3-201ENSMUST00000067284 Abca16E9PWJ7 1678 aa13.56□□□□□ -0.24
Cpsf3-201ENSMUST00000067284 Gcc2Q8CHG3 1679 aa13.55□□□□□ -0.24
Cpsf3-201ENSMUST00000067284 Soga1E1U8D0 1418 aa13.55□□□□□ -0.24
Cpsf3-201ENSMUST00000067284 WrnO09053 1401 aa13.54□□□□□ -0.24
Cpsf3-201ENSMUST00000067284 Sin3aQ60520 1274 aaKnown RBP13.53□□□□□ -0.24
Cpsf3-201ENSMUST00000067284 Ncoa3O09000 1398 aa13.52□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Gm38655A0A286YDK6 273 aa13.52□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Cul7Q8VE73 1689 aa13.52□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Cabp1Q9JLK7 227 aa13.51□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Zfp644E9QA22 1323 aa13.51□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Arhgap27A2AB59 869 aa13.5□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Naip5Q9R016 1403 aa13.5□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Ncoa2Q61026 1462 aa13.5□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Kdm6bQ5NCY0 1641 aa13.49□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Arhgef40Q3UPH7 1517 aa13.49□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Mug1P28665 1476 aa13.49□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Nup160Q9Z0W3 1402 aaKnown RBP13.48□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Gm13697A2AK42 830 aa13.48□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Mphosph9A6H5Y1 991 aa13.48□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms