RNA–Protein interactions for RNA: ENSMUST00000060397.12

Rfx4-202, Transcript of Transcription factor RFX4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rfx4, Length 3,534 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4-202ENSMUST00000060397 Ythdc1E9Q5K9 736 aaKnown RBP8.53□□□□□ -1.04
Rfx4-202ENSMUST00000060397 AampJ3QN89 436 aa8.53□□□□□ -1.04
Rfx4-202ENSMUST00000060397 Rsf1E9PWW9 1441 aaKnown RBP8.52□□□□□ -1.05
Rfx4-202ENSMUST00000060397 Supt16hQ920B9 1047 aa8.51□□□□□ -1.05
Rfx4-202ENSMUST00000060397 Myt1lP97500 1187 aa8.51□□□□□ -1.05
Rfx4-202ENSMUST00000060397 Scaf1Q5U4C3 1256 aaKnown RBP8.5□□□□□ -1.05
Rfx4-202ENSMUST00000060397 Stra8P70278 393 aa8.5□□□□□ -1.05
Rfx4-202ENSMUST00000060397 Cc2d2aQ8CFW7 1633 aa8.5□□□□□ -1.05
Rfx4-202ENSMUST00000060397 Ccdc88bQ4QRL3 1481 aa8.49□□□□□ -1.05
Rfx4-202ENSMUST00000060397 Nolc1E9Q5C9 702 aaKnown RBP8.49□□□□□ -1.05
Rfx4-202ENSMUST00000060397 Dnttip2Q8R2M2 758 aaKnown RBP8.49□□□□□ -1.05
Rfx4-202ENSMUST00000060397 Cep164Q5DU05 1446 aa8.48□□□□□ -1.05
Rfx4-202ENSMUST00000060397 DaxxO35613 739 aa8.47□□□□□ -1.05
Rfx4-202ENSMUST00000060397 Esf1Q3V1V3 845 aaKnown RBP8.47□□□□□ -1.05
Rfx4-202ENSMUST00000060397 Fam135aQ6NS59 1506 aa8.47□□□□□ -1.05
Rfx4-202ENSMUST00000060397 Golga3P55937 1487 aa8.47□□□□□ -1.05
Rfx4-202ENSMUST00000060397 UbtfP25976 765 aaKnown RBP8.47□□□□□ -1.05
Rfx4-202ENSMUST00000060397 Smarca4Q3TKT4 1613 aaKnown RBP8.46□□□□□ -1.06
Rfx4-202ENSMUST00000060397 Ubl4bQ9CQ84 188 aa8.46□□□□□ -1.06
Rfx4-202ENSMUST00000060397 Calr4Q3TQS0 420 aa8.45□□□□□ -1.06
Rfx4-202ENSMUST00000060397 Rbm10Q99KG3 930 aaKnown RBP8.45□□□□□ -1.06
Rfx4-202ENSMUST00000060397 Kcna4Q61423 654 aa8.45□□□□□ -1.06
Rfx4-202ENSMUST00000060397 Pdcl3Q8BVF2 240 aa8.44□□□□□ -1.06
Rfx4-202ENSMUST00000060397 Cttnbp2B9EJA2 1648 aa8.43□□□□□ -1.06
Rfx4-202ENSMUST00000060397 Top2bQ64511 1612 aa8.43□□□□□ -1.06
Rfx4-202ENSMUST00000060397 Iqgap2Q3UQ44 1575 aa8.42□□□□□ -1.06
Rfx4-202ENSMUST00000060397 Ap3b1Q9Z1T1 1105 aa8.42□□□□□ -1.06
Rfx4-202ENSMUST00000060397 Vgll3P85442 326 aa8.41□□□□□ -1.06
Rfx4-202ENSMUST00000060397 DmtnQ9WV69 405 aa8.41□□□□□ -1.06
Rfx4-202ENSMUST00000060397 Ppp4r2Q0VGB7 417 aa8.39□□□□□ -1.07
Rfx4-202ENSMUST00000060397 Slc4a1apE9PX68 744 aa8.38□□□□□ -1.07
Rfx4-202ENSMUST00000060397 Wdr43Q6ZQL4 677 aaKnown RBP8.38□□□□□ -1.07
Rfx4-202ENSMUST00000060397 Gtf2a1Q99PM3 378 aa8.38□□□□□ -1.07
Rfx4-202ENSMUST00000060397 NgefQ8CHT1 710 aa8.36□□□□□ -1.07
Rfx4-202ENSMUST00000060397 Frmpd1A2AKB4 1549 aa8.36□□□□□ -1.07
Rfx4-202ENSMUST00000060397 Phldb1Q6PDH0 1371 aaKnown RBP8.35□□□□□ -1.07
Rfx4-202ENSMUST00000060397 Arid3aQ62431 601 aa8.35□□□□□ -1.07
Rfx4-202ENSMUST00000060397 Gab3Q8BSM5 595 aa8.35□□□□□ -1.07
Rfx4-202ENSMUST00000060397 Armcx1Q9CX83 456 aa8.35□□□□□ -1.07
Rfx4-202ENSMUST00000060397 Zbtb4Q5F293 982 aa8.34□□□□□ -1.07
Rfx4-202ENSMUST00000060397 Znf326O88291 580 aa8.34□□□□□ -1.07
Rfx4-202ENSMUST00000060397 Rsph4aQ8BYM7 716 aa8.34□□□□□ -1.07
Rfx4-202ENSMUST00000060397 Rrp9Q91WM3 475 aaKnown RBP8.34□□□□□ -1.07
Rfx4-202ENSMUST00000060397 TonslQ6NZL6 1363 aa8.33□□□□□ -1.08
Rfx4-202ENSMUST00000060397 AU015836B2RUM3 263 aa8.32□□□□□ -1.08
Rfx4-202ENSMUST00000060397 Znf692Q3U381 531 aa8.32□□□□□ -1.08
Rfx4-202ENSMUST00000060397 Q8BT18 775 aa8.32□□□□□ -1.08
Rfx4-202ENSMUST00000060397 Wdr62Q3U3T8 1523 aa8.31□□□□□ -1.08
Rfx4-202ENSMUST00000060397 4930567H17RikQ3V0K5 233 aa8.31□□□□□ -1.08
Rfx4-202ENSMUST00000060397 Kcnn1Q9EQR3 537 aa8.31□□□□□ -1.08
Rfx4-202ENSMUST00000060397 DekQ7TNV0 380 aaKnown RBP8.3□□□□□ -1.08
Rfx4-202ENSMUST00000060397 Tshz2Q68FE9 1030 aa8.28□□□□□ -1.08
Rfx4-202ENSMUST00000060397 Chrna2Q91X60 512 aa8.28□□□□□ -1.08
Rfx4-202ENSMUST00000060397 Shroom2A2ALU4 1481 aa8.28□□□□□ -1.08
Rfx4-202ENSMUST00000060397 Mrc2Q64449 1479 aa8.28□□□□□ -1.08
Rfx4-202ENSMUST00000060397 Fam43aQ8BUP8 424 aa8.28□□□□□ -1.08
Rfx4-202ENSMUST00000060397 Ipo9Q91YE6 1041 aa8.28□□□□□ -1.08
Rfx4-202ENSMUST00000060397 Prdm16A2A935 1275 aa8.26□□□□□ -1.09
Rfx4-202ENSMUST00000060397 4933402E13RikQ9D4D2 429 aa8.26□□□□□ -1.09
Rfx4-202ENSMUST00000060397 Ccer2J3QPU5 274 aa8.25□□□□□ -1.09
Rfx4-202ENSMUST00000060397 Stard8Q8K031 1019 aa8.25□□□□□ -1.09
Rfx4-202ENSMUST00000060397 Fmn1Q05860 1466 aa8.24□□□□□ -1.09
Rfx4-202ENSMUST00000060397 Pak3Q61036 559 aa8.24□□□□□ -1.09
Rfx4-202ENSMUST00000060397 Fbxo3Q9DC63 480 aa8.24□□□□□ -1.09
Rfx4-202ENSMUST00000060397 Top2aQ01320 1528 aaKnown RBP8.23□□□□□ -1.09
Rfx4-202ENSMUST00000060397 IbspQ61711 324 aa8.23□□□□□ -1.09
Rfx4-202ENSMUST00000060397 Ncbp3Q8BZR9 615 aaKnown RBP8.23□□□□□ -1.09
Rfx4-202ENSMUST00000060397 Podxl2Q8CAE9 603 aa8.22□□□□□ -1.09
Rfx4-202ENSMUST00000060397 Zfp91Q62511 572 aa8.21□□□□□ -1.09
Rfx4-202ENSMUST00000060397 Tnnt2P50752 301 aa8.21□□□□□ -1.1
Rfx4-202ENSMUST00000060397 Npm1Q61937 292 aaKnown RBP8.21□□□□□ -1.1
Rfx4-202ENSMUST00000060397 Kif15Q6P9L6 1387 aa8.21□□□□□ -1.1
Rfx4-202ENSMUST00000060397 Rapgef2Q8CHG7 1496 aa8.2□□□□□ -1.1
Rfx4-202ENSMUST00000060397 Znf710Q3U288 666 aa8.2□□□□□ -1.1
Rfx4-202ENSMUST00000060397 TnnQ80Z71 1560 aa8.19□□□□□ -1.1
Rfx4-202ENSMUST00000060397 NclP09405 707 aaKnown RBP8.19□□□□□ -1.1
Rfx4-202ENSMUST00000060397 Ube2q2Q8K2Z8 378 aa8.19□□□□□ -1.1
Rfx4-202ENSMUST00000060397 Unc13aQ4KUS2 1712 aa8.19□□□□□ -1.1
Rfx4-202ENSMUST00000060397 AcrbpQ3V140 540 aa8.18□□□□□ -1.1
Rfx4-202ENSMUST00000060397 Slc24a1Q91WD8 1130 aa8.18□□□□□ -1.1
Rfx4-202ENSMUST00000060397 Col17a1Q07563 1470 aa8.18□□□□□ -1.1
Rfx4-202ENSMUST00000060397 Trim26Q99PN3 545 aa8.17□□□□□ -1.1
Rfx4-202ENSMUST00000060397 Cux2P70298 1426 aa8.16□□□□□ -1.1
Rfx4-202ENSMUST00000060397 Iqcf3Q9D498 203 aa8.16□□□□□ -1.1
Rfx4-202ENSMUST00000060397 ChgaP26339 463 aaKnown RBP8.14□□□□□ -1.11
Rfx4-202ENSMUST00000060397 Chmp4bQ9D8B3 224 aaKnown RBP8.14□□□□□ -1.11
Rfx4-202ENSMUST00000060397 Lamc3Q9R0B6 1581 aa8.13□□□□□ -1.11
Rfx4-202ENSMUST00000060397 Cep162Q6ZQ06 1403 aa8.13□□□□□ -1.11
Rfx4-202ENSMUST00000060397 PtprkP35822 1457 aa8.13□□□□□ -1.11
Rfx4-202ENSMUST00000060397 Dusp27Q148W8 1138 aa8.13□□□□□ -1.11
Rfx4-202ENSMUST00000060397 Eif4g1Q6NZJ6 1600 aaKnown RBP8.13□□□□□ -1.11
Rfx4-202ENSMUST00000060397 BbxQ8VBW5 907 aa8.12□□□□□ -1.11
Rfx4-202ENSMUST00000060397 Samd1D3YXK1 519 aa8.12□□□□□ -1.11
Rfx4-202ENSMUST00000060397 Pabpn1Q8CCS6 302 aaKnown RBP8.1□□□□□ -1.11
Rfx4-202ENSMUST00000060397 Washc2Q6PGL7 1334 aa8.1□□□□□ -1.11
Rfx4-202ENSMUST00000060397 Zbtb7cQ8VCZ7 619 aa8.09□□□□□ -1.11
Rfx4-202ENSMUST00000060397 Liat1Q810M6 228 aa8.09□□□□□ -1.11
Rfx4-202ENSMUST00000060397 Zcchc11B2RX14 1644 aaKnown RBP8.09□□□□□ -1.12
Rfx4-202ENSMUST00000060397 Egfem1Q8C088 590 aa8.08□□□□□ -1.12
Rfx4-202ENSMUST00000060397 Plcd3Q8K2J0 785 aa8.07□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms