RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 Map3k1P53349 1493 aa21.02■□□□□ 0.96
Msx3-201ENSMUST00000055353 BlmO88700 1416 aa21.01■□□□□ 0.95
Msx3-201ENSMUST00000055353 Mapk8ip2Q9ERE9 830 aa21.01■□□□□ 0.95
Msx3-201ENSMUST00000055353 Naip1Q9QWK5 1403 aa21■□□□□ 0.95
Msx3-201ENSMUST00000055353 Aplp2Q06335 707 aa20.99■□□□□ 0.95
Msx3-201ENSMUST00000055353 Grin2bQ01097 1482 aa20.98■□□□□ 0.95
Msx3-201ENSMUST00000055353 Mroh2bQ7M6Y6 1581 aa20.97■□□□□ 0.95
Msx3-201ENSMUST00000055353 Ankrd26Q811D2 1581 aa20.97■□□□□ 0.95
Msx3-201ENSMUST00000055353 Baz1bQ9Z277 1479 aa20.97■□□□□ 0.95
Msx3-201ENSMUST00000055353 Lmod2Q3UHZ5 550 aa20.96■□□□□ 0.95
Msx3-201ENSMUST00000055353 Slx4Q6P1D7 1565 aa20.94■□□□□ 0.94
Msx3-201ENSMUST00000055353 Fam50aQ9WV03 339 aaKnown RBP20.94■□□□□ 0.94
Msx3-201ENSMUST00000055353 Ercc6F8VPZ5 1481 aa20.92■□□□□ 0.94
Msx3-201ENSMUST00000055353 Pcf11G3X9Z4 1553 aa20.92■□□□□ 0.94
Msx3-201ENSMUST00000055353 Erich3F6QRE9 1637 aa20.9■□□□□ 0.94
Msx3-201ENSMUST00000055353 TchhA0A0B4J1F9 1599 aa20.9■□□□□ 0.94
Msx3-201ENSMUST00000055353 Hnrnpul2Q00PI9 745 aaKnown RBP20.83■□□□□ 0.93
Msx3-201ENSMUST00000055353 3425401B19RikD3Z1D3 1412 aa20.81■□□□□ 0.92
Msx3-201ENSMUST00000055353 Cux1P53564 1515 aa20.81■□□□□ 0.92
Msx3-201ENSMUST00000055353 NclP09405 707 aaKnown RBP20.78■□□□□ 0.92
Msx3-201ENSMUST00000055353 Lmo7E9PYF4 1699 aaKnown RBP20.78■□□□□ 0.92
Msx3-201ENSMUST00000055353 Rpap1Q80TE0 1409 aa20.77■□□□□ 0.92
Msx3-201ENSMUST00000055353 SafbD3YXK2 937 aaKnown RBP20.77■□□□□ 0.91
Msx3-201ENSMUST00000055353 Cux2P70298 1426 aa20.75■□□□□ 0.91
Msx3-201ENSMUST00000055353 Hspa5P20029 655 aaKnown RBP20.74■□□□□ 0.91
Msx3-201ENSMUST00000055353 CntlnA2AM05 1397 aa20.7■□□□□ 0.9
Msx3-201ENSMUST00000055353 Npm1Q61937 292 aaKnown RBP20.7■□□□□ 0.9
Msx3-201ENSMUST00000055353 Carmil1Q6EDY6 1374 aa20.7■□□□□ 0.9
Msx3-201ENSMUST00000055353 Ubl4bQ9CQ84 188 aa20.66■□□□□ 0.9
Msx3-201ENSMUST00000055353 Efcab5A0JP43 1406 aa20.64■□□□□ 0.89
Msx3-201ENSMUST00000055353 Urb2E9Q7L1 1524 aaKnown RBP20.64■□□□□ 0.89
Msx3-201ENSMUST00000055353 Dhx29Q6PGC1 1365 aaKnown RBP20.63■□□□□ 0.89
Msx3-201ENSMUST00000055353 Duox2A2AQ99 1517 aa20.62■□□□□ 0.89
Msx3-201ENSMUST00000055353 LrpprcQ6PB66 1392 aaKnown RBP20.62■□□□□ 0.89
Msx3-201ENSMUST00000055353 Phldb1Q6PDH0 1371 aaKnown RBP20.62■□□□□ 0.89
Msx3-201ENSMUST00000055353 Aebp1Q640N1 1128 aa20.62■□□□□ 0.89
Msx3-201ENSMUST00000055353 Fyco1Q8VDC1 1437 aa20.61■□□□□ 0.89
Msx3-201ENSMUST00000055353 Fhad1A6PWD2 1420 aa20.6■□□□□ 0.89
Msx3-201ENSMUST00000055353 PogzQ8BZH4 1409 aaKnown RBP20.59■□□□□ 0.89
Msx3-201ENSMUST00000055353 UacaQ8CGB3 1411 aa20.59■□□□□ 0.89
Msx3-201ENSMUST00000055353 Gm1043A0A140LJC2 1431 aa20.58■□□□□ 0.89
Msx3-201ENSMUST00000055353 Gm7298A0A0N4SVU1 1476 aa20.57■□□□□ 0.88
Msx3-201ENSMUST00000055353 Znf710Q3U288 666 aa20.57■□□□□ 0.88
Msx3-201ENSMUST00000055353 Tnnt3Q9QZ47 272 aa20.55■□□□□ 0.88
Msx3-201ENSMUST00000055353 Naip2Q9QUK4 1447 aa20.55■□□□□ 0.88
Msx3-201ENSMUST00000055353 Sin3aQ60520 1274 aaKnown RBP20.54■□□□□ 0.88
Msx3-201ENSMUST00000055353 Chic2Q9D9G3 165 aa20.54■□□□□ 0.88
Msx3-201ENSMUST00000055353 Mia2Q91ZV0 1396 aa20.54■□□□□ 0.88
Msx3-201ENSMUST00000055353 Peg3Q3URU2 1571 aa20.54■□□□□ 0.88
Msx3-201ENSMUST00000055353 Vps8Q0P5W1 1427 aa20.53■□□□□ 0.88
Msx3-201ENSMUST00000055353 Samd9lQ69Z37 1561 aa20.53■□□□□ 0.88
Msx3-201ENSMUST00000055353 Ankrd36D3Z4K0 1415 aa20.53■□□□□ 0.88
Msx3-201ENSMUST00000055353 Rad54l2Q99NG0 1466 aa20.52■□□□□ 0.88
Msx3-201ENSMUST00000055353 Ube2uB1AUC4 352 aa20.52■□□□□ 0.88
Msx3-201ENSMUST00000055353 Gm13697A2AK42 830 aa20.51■□□□□ 0.87
Msx3-201ENSMUST00000055353 A2mQ6GQT1 1474 aa20.5■□□□□ 0.87
Msx3-201ENSMUST00000055353 SynmQ70IV5 1561 aa20.5■□□□□ 0.87
Msx3-201ENSMUST00000055353 Ccer2J3QPU5 274 aa20.48■□□□□ 0.87
Msx3-201ENSMUST00000055353 PrkcshO08795 521 aa20.47■□□□□ 0.87
Msx3-201ENSMUST00000055353 Fam71e1A1L3C1 212 aa20.46■□□□□ 0.87
Msx3-201ENSMUST00000055353 Dennd4bQ3U1Y4 1499 aa20.46■□□□□ 0.87
Msx3-201ENSMUST00000055353 Thoc2B1AZI6 1594 aaKnown RBP20.46■□□□□ 0.87
Msx3-201ENSMUST00000055353 CatipB9EKE5 520 aa20.45■□□□□ 0.86
Msx3-201ENSMUST00000055353 Crocc2F6XLV1 1638 aa20.45■□□□□ 0.86
Msx3-201ENSMUST00000055353 Ccnb3Q810T2 1396 aa20.43■□□□□ 0.86
Msx3-201ENSMUST00000055353 Slc24a1Q91WD8 1130 aa20.39■□□□□ 0.85
Msx3-201ENSMUST00000055353 Naip5Q9R016 1403 aa20.39■□□□□ 0.85
Msx3-201ENSMUST00000055353 Polr1aO35134 1717 aaKnown RBP20.35■□□□□ 0.85
Msx3-201ENSMUST00000055353 Stra8P70278 393 aa20.35■□□□□ 0.85
Msx3-201ENSMUST00000055353 EprsQ8CGC7 1512 aaKnown RBP20.32■□□□□ 0.84
Msx3-201ENSMUST00000055353 Gpatch8A2A6A1 1505 aa20.31■□□□□ 0.84
Msx3-201ENSMUST00000055353 Smg6P61406 1418 aaKnown RBP20.31■□□□□ 0.84
Msx3-201ENSMUST00000055353 Ncoa2Q61026 1462 aa20.3■□□□□ 0.84
Msx3-201ENSMUST00000055353 Cul7Q8VE73 1689 aa20.29■□□□□ 0.84
Msx3-201ENSMUST00000055353 Lmtk2Q3TYD6 1471 aa20.29■□□□□ 0.84
Msx3-201ENSMUST00000055353 Pla2r1Q62028 1487 aa20.28■□□□□ 0.84
Msx3-201ENSMUST00000055353 Fam135aQ6NS59 1506 aa20.28■□□□□ 0.84
Msx3-201ENSMUST00000055353 CadpsQ80TJ1 1355 aa20.28■□□□□ 0.84
Msx3-201ENSMUST00000055353 Camsap2Q8C1B1 1461 aa20.27■□□□□ 0.84
Msx3-201ENSMUST00000055353 Mphosph9A6H5Y1 991 aa20.27■□□□□ 0.84
Msx3-201ENSMUST00000055353 Kif27Q7M6Z4 1394 aa20.26■□□□□ 0.83
Msx3-201ENSMUST00000055353 Zfp644E9QA22 1323 aa20.25■□□□□ 0.83
Msx3-201ENSMUST00000055353 NexmifQ5DTT1 1515 aa20.24■□□□□ 0.83
Msx3-201ENSMUST00000055353 BC005561E9Q5E2 1589 aa20.24■□□□□ 0.83
Msx3-201ENSMUST00000055353 Calr4Q3TQS0 420 aa20.23■□□□□ 0.83
Msx3-201ENSMUST00000055353 Cabp1Q9JLK7 227 aa20.21■□□□□ 0.83
Msx3-201ENSMUST00000055353 Abca5Q8K448 1642 aa20.21■□□□□ 0.83
Msx3-201ENSMUST00000055353 Magi3Q9EQJ9 1476 aa20.19■□□□□ 0.82
Msx3-201ENSMUST00000055353 Nolc1E9Q5C9 702 aaKnown RBP20.19■□□□□ 0.82
Msx3-201ENSMUST00000055353 Kif21aQ9QXL2 1672 aa20.18■□□□□ 0.82
Msx3-201ENSMUST00000055353 Fhod3Q76LL6 1578 aa20.17■□□□□ 0.82
Msx3-201ENSMUST00000055353 Anp32aO35381 247 aa20.16■□□□□ 0.82
Msx3-201ENSMUST00000055353 WizO88286 1684 aaKnown RBP20.15■□□□□ 0.82
Msx3-201ENSMUST00000055353 Pprc1Q6NZN1 1644 aa20.15■□□□□ 0.82
Msx3-201ENSMUST00000055353 Gcc2Q8CHG3 1679 aa20.15■□□□□ 0.82
Msx3-201ENSMUST00000055353 Eif5bQ05D44 1216 aaKnown RBP20.13■□□□□ 0.81
Msx3-201ENSMUST00000055353 Pkd2O35245 966 aa20.13■□□□□ 0.81
Msx3-201ENSMUST00000055353 Usp47Q8BY87 1376 aa20.13■□□□□ 0.81
Msx3-201ENSMUST00000055353 Grin2aP35436 1464 aa20.13■□□□□ 0.81
Msx3-201ENSMUST00000055353 Mug1P28665 1476 aa20.12■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms