RNA–Protein interactions for RNA: ENSMUST00000046154.11

Lin54-201, Transcript of Protein lin-54 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lin54, Length 4,451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lin54-201ENSMUST00000046154 Ccer2J3QPU5 274 aa19■□□□□ 0.63
Lin54-201ENSMUST00000046154 Nolc1E9Q5C9 702 aaKnown RBP19■□□□□ 0.63
Lin54-201ENSMUST00000046154 Ofd1Q80Z25 1017 aa18.97■□□□□ 0.63
Lin54-201ENSMUST00000046154 BlmO88700 1416 aa18.94■□□□□ 0.62
Lin54-201ENSMUST00000046154 Ythdc1E9Q5K9 736 aaKnown RBP18.92■□□□□ 0.62
Lin54-201ENSMUST00000046154 Upf2A2AT37 1269 aaKnown RBP18.92■□□□□ 0.62
Lin54-201ENSMUST00000046154 Nlrp6Q91WS2 869 aa18.89■□□□□ 0.61
Lin54-201ENSMUST00000046154 Trim30dE9PWL0 497 aa18.86■□□□□ 0.61
Lin54-201ENSMUST00000046154 Vsig10D3YX43 558 aa18.86■□□□□ 0.61
Lin54-201ENSMUST00000046154 Rangap1P46061 589 aaKnown RBP18.85■□□□□ 0.61
Lin54-201ENSMUST00000046154 Lmod3E9QA62 571 aa18.84■□□□□ 0.61
Lin54-201ENSMUST00000046154 Wwc2Q6NXJ0 1187 aa18.84■□□□□ 0.61
Lin54-201ENSMUST00000046154 Hdac5Q9Z2V6 1113 aa18.8■□□□□ 0.6
Lin54-201ENSMUST00000046154 Setd5Q5XJV7 1441 aa18.8■□□□□ 0.6
Lin54-201ENSMUST00000046154 Hsp90ab1P11499 724 aaKnown RBP18.8■□□□□ 0.6
Lin54-201ENSMUST00000046154 Spryd3E9Q9B3 442 aa18.79■□□□□ 0.6
Lin54-201ENSMUST00000046154 Hspa5P20029 655 aaKnown RBP18.79■□□□□ 0.6
Lin54-201ENSMUST00000046154 Dbr1Q923B1 550 aa18.79■□□□□ 0.6
Lin54-201ENSMUST00000046154 DekQ7TNV0 380 aaKnown RBP18.78■□□□□ 0.6
Lin54-201ENSMUST00000046154 Gtf3c3Q3TMP1 882 aa18.78■□□□□ 0.6
Lin54-201ENSMUST00000046154 Npm1Q61937 292 aaKnown RBP18.77■□□□□ 0.6
Lin54-201ENSMUST00000046154 B4galnt3Q6L8S8 986 aa18.77■□□□□ 0.6
Lin54-201ENSMUST00000046154 Sin3aQ60520 1274 aaKnown RBP18.77■□□□□ 0.59
Lin54-201ENSMUST00000046154 Golga3P55937 1487 aa18.76■□□□□ 0.59
Lin54-201ENSMUST00000046154 Apbb1Q9QXJ1 710 aa18.74■□□□□ 0.59
Lin54-201ENSMUST00000046154 Trim44Q9QXA7 346 aa18.73■□□□□ 0.59
Lin54-201ENSMUST00000046154 Arid4bA2CG63 1314 aaKnown RBP18.73■□□□□ 0.59
Lin54-201ENSMUST00000046154 Tcerg1Q8CGF7 1100 aaKnown RBP18.73■□□□□ 0.59
Lin54-201ENSMUST00000046154 Ccdc88bQ4QRL3 1481 aa18.72■□□□□ 0.59
Lin54-201ENSMUST00000046154 Erich6D3Z6S9 713 aa18.72■□□□□ 0.59
Lin54-201ENSMUST00000046154 Gm13697A2AK42 830 aa18.71■□□□□ 0.59
Lin54-201ENSMUST00000046154 Rgl3Q3UYI5 709 aa18.68■□□□□ 0.58
Lin54-201ENSMUST00000046154 Ipo9Q91YE6 1041 aa18.68■□□□□ 0.58
Lin54-201ENSMUST00000046154 Taok2Q6ZQ29 1240 aa18.65■□□□□ 0.58
Lin54-201ENSMUST00000046154 ChgaP26339 463 aaKnown RBP18.62■□□□□ 0.57
Lin54-201ENSMUST00000046154 Ppm1gQ61074 542 aa18.62■□□□□ 0.57
Lin54-201ENSMUST00000046154 Trim26Q99PN3 545 aa18.61■□□□□ 0.57
Lin54-201ENSMUST00000046154 AU015836B2RUM3 263 aa18.61■□□□□ 0.57
Lin54-201ENSMUST00000046154 Htatsf1Q8BGC0 757 aa18.6■□□□□ 0.57
Lin54-201ENSMUST00000046154 Exoc6Q8R313 802 aa18.6■□□□□ 0.57
Lin54-201ENSMUST00000046154 Plcb2A3KGF7 1181 aa18.59■□□□□ 0.57
Lin54-201ENSMUST00000046154 Baz1aO88379 1555 aa18.59■□□□□ 0.57
Lin54-201ENSMUST00000046154 Eea1Q8BL66 1411 aa18.57■□□□□ 0.56
Lin54-201ENSMUST00000046154 Pknox2Q8BG99 474 aa18.57■□□□□ 0.56
Lin54-201ENSMUST00000046154 Plcd4Q8K3R3 807 aa18.56■□□□□ 0.56
Lin54-201ENSMUST00000046154 Grwd1Q810D6 446 aaKnown RBP18.56■□□□□ 0.56
Lin54-201ENSMUST00000046154 Dnttip2Q8R2M2 758 aaKnown RBP18.55■□□□□ 0.56
Lin54-201ENSMUST00000046154 Fkbp15Q6P9Q6 1216 aaKnown RBP18.51■□□□□ 0.55
Lin54-201ENSMUST00000046154 Dnai1Q8C0M8 701 aa18.51■□□□□ 0.55
Lin54-201ENSMUST00000046154 Neurod2Q62414 383 aa18.5■□□□□ 0.55
Lin54-201ENSMUST00000046154 Znf710Q3U288 666 aa18.49■□□□□ 0.55
Lin54-201ENSMUST00000046154 Armcx1Q9CX83 456 aa18.49■□□□□ 0.55
Lin54-201ENSMUST00000046154 Chmp5Q9D7S9 219 aa18.48■□□□□ 0.55
Lin54-201ENSMUST00000046154 Card11Q8CIS0 1159 aa18.45■□□□□ 0.54
Lin54-201ENSMUST00000046154 Pak3Q61036 559 aa18.45■□□□□ 0.54
Lin54-201ENSMUST00000046154 PtmaP26350 111 aa18.43■□□□□ 0.54
Lin54-201ENSMUST00000046154 CatipB9EKE5 520 aa18.43■□□□□ 0.54
Lin54-201ENSMUST00000046154 Cep162Q6ZQ06 1403 aa18.42■□□□□ 0.54
Lin54-201ENSMUST00000046154 Cwc22Q8C5N3 908 aaKnown RBP18.38■□□□□ 0.53
Lin54-201ENSMUST00000046154 Atp1b4Q99ME6 356 aa18.37■□□□□ 0.53
Lin54-201ENSMUST00000046154 Rtn4Q99P72 1162 aaKnown RBP18.37■□□□□ 0.53
Lin54-201ENSMUST00000046154 EspnQ9ET47 871 aa18.32■□□□□ 0.52
Lin54-201ENSMUST00000046154 Smg6P61406 1418 aaKnown RBP18.32■□□□□ 0.52
Lin54-201ENSMUST00000046154 Rwdd1Q9CQK7 243 aa18.31■□□□□ 0.52
Lin54-201ENSMUST00000046154 Gm13695A2AK44 830 aa18.31■□□□□ 0.52
Lin54-201ENSMUST00000046154 Mia2Q91ZV0 1396 aa18.29■□□□□ 0.52
Lin54-201ENSMUST00000046154 Baz1bQ9Z277 1479 aa18.28■□□□□ 0.52
Lin54-201ENSMUST00000046154 Erich6bQ9D4S6 220 aa18.27■□□□□ 0.52
Lin54-201ENSMUST00000046154 Sart3Q9JLI8 962 aaKnown RBP18.27■□□□□ 0.52
Lin54-201ENSMUST00000046154 Gm6268A2A3U9 297 aa18.24■□□□□ 0.51
Lin54-201ENSMUST00000046154 Pkd2O35245 966 aa18.24■□□□□ 0.51
Lin54-201ENSMUST00000046154 Kdm2aP59997 1161 aa18.24■□□□□ 0.51
Lin54-201ENSMUST00000046154 Rundc1Q0VDN7 615 aa18.23■□□□□ 0.51
Lin54-201ENSMUST00000046154 Zscan21Q07231 555 aa18.23■□□□□ 0.51
Lin54-201ENSMUST00000046154 Tnnt2P50752 301 aa18.22■□□□□ 0.51
Lin54-201ENSMUST00000046154 Mbd3Q9Z2D8 285 aaKnown RBP18.21■□□□□ 0.51
Lin54-201ENSMUST00000046154 Mak16Q8BGS0 296 aaKnown RBP18.21■□□□□ 0.51
Lin54-201ENSMUST00000046154 Ipo8Q7TMY7 1010 aa18.21■□□□□ 0.51
Lin54-201ENSMUST00000046154 NacadQ5SWP3 1504 aa18.2■□□□□ 0.5
Lin54-201ENSMUST00000046154 IbspQ61711 324 aa18.19■□□□□ 0.5
Lin54-201ENSMUST00000046154 SlkO54988 1233 aa18.17■□□□□ 0.5
Lin54-201ENSMUST00000046154 Speer4f1Q9D5Q6 258 aa18.16■□□□□ 0.5
Lin54-201ENSMUST00000046154 Fgd1P52734 960 aa18.15■□□□□ 0.5
Lin54-201ENSMUST00000046154 CntlnA2AM05 1397 aa18.15■□□□□ 0.5
Lin54-201ENSMUST00000046154 Rrp12Q6P5B0 1295 aaKnown RBP18.14■□□□□ 0.49
Lin54-201ENSMUST00000046154 Mphosph9A6H5Y1 991 aa18.13■□□□□ 0.49
Lin54-201ENSMUST00000046154 Clstn2Q9ER65 966 aa18.13■□□□□ 0.49
Lin54-201ENSMUST00000046154 CrbnQ8C7D2 445 aa18.12■□□□□ 0.49
Lin54-201ENSMUST00000046154 Cluap1Q8R3P7 413 aa18.12■□□□□ 0.49
Lin54-201ENSMUST00000046154 Rapgef2Q8CHG7 1496 aa18.11■□□□□ 0.49
Lin54-201ENSMUST00000046154 Eif2s2Q99L45 331 aaKnown RBP18.1■□□□□ 0.49
Lin54-201ENSMUST00000046154 Mfap1aC0HKD8 439 aaKnown RBP18.09■□□□□ 0.49
Lin54-201ENSMUST00000046154 Mfap1bC0HKD9 439 aaKnown RBP18.09■□□□□ 0.49
Lin54-201ENSMUST00000046154 Map7O88735 730 aa18.09■□□□□ 0.49
Lin54-201ENSMUST00000046154 Mre11Q61216 706 aa18.09■□□□□ 0.49
Lin54-201ENSMUST00000046154 Ubl4bQ9CQ84 188 aa18.09■□□□□ 0.49
Lin54-201ENSMUST00000046154 Kif15Q6P9L6 1387 aa18.08■□□□□ 0.49
Lin54-201ENSMUST00000046154 Ipo4Q8VI75 1082 aa18.08■□□□□ 0.49
Lin54-201ENSMUST00000046154 Mroh3A0A1D5RM54 893 aa18.08■□□□□ 0.48
Lin54-201ENSMUST00000046154 Kcnh8P59111 1102 aa18.07■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms