RNA–Protein interactions for RNA: ENSMUST00000042534.14

Ccdc85a-201, Transcript of Coiled-coil domain-containing protein 85A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc85a, Length 5,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85a-201ENSMUST00000042534 Eea1Q8BL66 1411 aa18.76■□□□□ 0.59
Ccdc85a-201ENSMUST00000042534 Gm13695A2AK44 830 aa18.73■□□□□ 0.59
Ccdc85a-201ENSMUST00000042534 Aebp2Q9Z248 504 aaKnown RBP18.7■□□□□ 0.58
Ccdc85a-201ENSMUST00000042534 Rad21Q61550 635 aaKnown RBP18.69■□□□□ 0.58
Ccdc85a-201ENSMUST00000042534 Kif15Q6P9L6 1387 aa18.68■□□□□ 0.58
Ccdc85a-201ENSMUST00000042534 Ccdc9Q8VC31 543 aaKnown RBP18.68■□□□□ 0.58
Ccdc85a-201ENSMUST00000042534 ArxO35085 564 aa18.67■□□□□ 0.58
Ccdc85a-201ENSMUST00000042534 Ccdc18Q640L5 1455 aa18.65■□□□□ 0.58
Ccdc85a-201ENSMUST00000042534 Kdm5dQ62240 1548 aa18.59■□□□□ 0.57
Ccdc85a-201ENSMUST00000042534 Rgl3Q3UYI5 709 aa18.58■□□□□ 0.56
Ccdc85a-201ENSMUST00000042534 Hsp90aa1P07901 733 aaKnown RBP18.57■□□□□ 0.56
Ccdc85a-201ENSMUST00000042534 Ercc6F8VPZ5 1481 aa18.57■□□□□ 0.56
Ccdc85a-201ENSMUST00000042534 1700123L14RikQ3V2K7 440 aa18.56■□□□□ 0.56
Ccdc85a-201ENSMUST00000042534 Mia2Q91ZV0 1396 aa18.56■□□□□ 0.56
Ccdc85a-201ENSMUST00000042534 Cwc22Q8C5N3 908 aaKnown RBP18.55■□□□□ 0.56
Ccdc85a-201ENSMUST00000042534 Ofd1Q80Z25 1017 aa18.53■□□□□ 0.56
Ccdc85a-201ENSMUST00000042534 Card11Q8CIS0 1159 aa18.45■□□□□ 0.54
Ccdc85a-201ENSMUST00000042534 Rangap1P46061 589 aaKnown RBP18.43■□□□□ 0.54
Ccdc85a-201ENSMUST00000042534 CanxP35564 591 aaKnown RBP18.43■□□□□ 0.54
Ccdc85a-201ENSMUST00000042534 Fam71e1A1L3C1 212 aa18.43■□□□□ 0.54
Ccdc85a-201ENSMUST00000042534 Mtus2Q3UHD3 1353 aa18.41■□□□□ 0.54
Ccdc85a-201ENSMUST00000042534 Hsp90ab1P11499 724 aaKnown RBP18.41■□□□□ 0.54
Ccdc85a-201ENSMUST00000042534 Fgd1P52734 960 aa18.4■□□□□ 0.54
Ccdc85a-201ENSMUST00000042534 Fmn1Q05860 1466 aa18.39■□□□□ 0.53
Ccdc85a-201ENSMUST00000042534 Trim30dE9PWL0 497 aa18.37■□□□□ 0.53
Ccdc85a-201ENSMUST00000042534 Cep162Q6ZQ06 1403 aa18.37■□□□□ 0.53
Ccdc85a-201ENSMUST00000042534 Grwd1Q810D6 446 aaKnown RBP18.36■□□□□ 0.53
Ccdc85a-201ENSMUST00000042534 IqubQ8CDK3 788 aa18.35■□□□□ 0.53
Ccdc85a-201ENSMUST00000042534 Ccdc88bQ4QRL3 1481 aa18.34■□□□□ 0.53
Ccdc85a-201ENSMUST00000042534 Mroh3A0A1D5RM54 893 aa18.34■□□□□ 0.53
Ccdc85a-201ENSMUST00000042534 DekQ7TNV0 380 aaKnown RBP18.34■□□□□ 0.53
Ccdc85a-201ENSMUST00000042534 Arhgap27A2AB59 869 aa18.34■□□□□ 0.53
Ccdc85a-201ENSMUST00000042534 P3h3Q8CG70 732 aa18.33■□□□□ 0.53
Ccdc85a-201ENSMUST00000042534 Srpk2O54781 681 aaKnown RBP18.32■□□□□ 0.52
Ccdc85a-201ENSMUST00000042534 Ccdc27Q3V036 639 aa18.31■□□□□ 0.52
Ccdc85a-201ENSMUST00000042534 Trim26Q99PN3 545 aa18.3■□□□□ 0.52
Ccdc85a-201ENSMUST00000042534 Htatsf1Q8BGC0 757 aa18.29■□□□□ 0.52
Ccdc85a-201ENSMUST00000042534 Kdm2aP59997 1161 aa18.28■□□□□ 0.52
Ccdc85a-201ENSMUST00000042534 Trim44Q9QXA7 346 aa18.28■□□□□ 0.52
Ccdc85a-201ENSMUST00000042534 Ppm1gQ61074 542 aa18.28■□□□□ 0.52
Ccdc85a-201ENSMUST00000042534 Gm20521D3Z5F7 333 aa18.27■□□□□ 0.51
Ccdc85a-201ENSMUST00000042534 Mbd3Q9Z2D8 285 aaKnown RBP18.25■□□□□ 0.51
Ccdc85a-201ENSMUST00000042534 Crybg2B7ZCC2 1516 aa18.25■□□□□ 0.51
Ccdc85a-201ENSMUST00000042534 Hspa5P20029 655 aaKnown RBP18.24■□□□□ 0.51
Ccdc85a-201ENSMUST00000042534 Rrp7aQ9D1C9 280 aaKnown RBP18.24■□□□□ 0.51
Ccdc85a-201ENSMUST00000042534 Pds5bQ4VA53 1446 aaKnown RBP18.23■□□□□ 0.51
Ccdc85a-201ENSMUST00000042534 Safb2Q80YR5 991 aaKnown RBP18.22■□□□□ 0.51
Ccdc85a-201ENSMUST00000042534 Chmp4bQ9D8B3 224 aaKnown RBP18.22■□□□□ 0.51
Ccdc85a-201ENSMUST00000042534 Fyco1Q8VDC1 1437 aa18.21■□□□□ 0.51
Ccdc85a-201ENSMUST00000042534 Mapk8ip3Q9ESN9 1337 aa18.2■□□□□ 0.5
Ccdc85a-201ENSMUST00000042534 Kif27Q7M6Z4 1394 aa18.19■□□□□ 0.5
Ccdc85a-201ENSMUST00000042534 Exosc9Q9JHI7 438 aaKnown RBP18.19■□□□□ 0.5
Ccdc85a-201ENSMUST00000042534 Plppr3Q7TPB0 716 aa18.19■□□□□ 0.5
Ccdc85a-201ENSMUST00000042534 Arhgap35Q91YM2 1499 aa18.16■□□□□ 0.5
Ccdc85a-201ENSMUST00000042534 Map7O88735 730 aa18.16■□□□□ 0.5
Ccdc85a-201ENSMUST00000042534 Neurod2Q62414 383 aa18.16■□□□□ 0.5
Ccdc85a-201ENSMUST00000042534 Apbb1Q9QXJ1 710 aa18.16■□□□□ 0.5
Ccdc85a-201ENSMUST00000042534 Vsig10D3YX43 558 aa18.15■□□□□ 0.5
Ccdc85a-201ENSMUST00000042534 CntlnA2AM05 1397 aa18.14■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 Pkd2O35245 966 aa18.14■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 CatipB9EKE5 520 aa18.13■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 NudcO35685 332 aaKnown RBP18.13■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 Sycp2Q9CUU3 1500 aa18.12■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 Baz1bQ9Z277 1479 aa18.12■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 Zfp777B9EKF4 885 aa18.12■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 Aebp1Q640N1 1128 aa18.12■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 Wwc2Q6NXJ0 1187 aa18.12■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 Tcerg1Q8CGF7 1100 aaKnown RBP18.11■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 SafbD3YXK2 937 aaKnown RBP18.1■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 PtmaP26350 111 aa18.1■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 Rwdd1Q9CQK7 243 aa18.1■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 Fhad1A6PWD2 1420 aa18.09■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 Plcb2A3KGF7 1181 aa18.09■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 Stag3O70576 1240 aa18.08■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 Map4P27546 1125 aaKnown RBP18.08■□□□□ 0.49
Ccdc85a-201ENSMUST00000042534 Rundc1Q0VDN7 615 aa18.08■□□□□ 0.48
Ccdc85a-201ENSMUST00000042534 Iqcf3Q9D498 203 aa18.08■□□□□ 0.48
Ccdc85a-201ENSMUST00000042534 CftrP26361 1476 aa18.07■□□□□ 0.48
Ccdc85a-201ENSMUST00000042534 Stk24Q99KH8 431 aa18.06■□□□□ 0.48
Ccdc85a-201ENSMUST00000042534 Arid4bA2CG63 1314 aaKnown RBP18.05■□□□□ 0.48
Ccdc85a-201ENSMUST00000042534 Mphosph9A6H5Y1 991 aa18.04■□□□□ 0.48
Ccdc85a-201ENSMUST00000042534 Dbr1Q923B1 550 aa18.02■□□□□ 0.48
Ccdc85a-201ENSMUST00000042534 Exoc6Q8R313 802 aa18.02■□□□□ 0.48
Ccdc85a-201ENSMUST00000042534 Smarca2Q6DIC0 1577 aa18.02■□□□□ 0.48
Ccdc85a-201ENSMUST00000042534 KnstrnQ9D9Z1 312 aaKnown RBP18.01■□□□□ 0.47
Ccdc85a-201ENSMUST00000042534 Gm6268A2A3U9 297 aa17.99■□□□□ 0.47
Ccdc85a-201ENSMUST00000042534 Zscan21Q07231 555 aa17.99■□□□□ 0.47
Ccdc85a-201ENSMUST00000042534 B4galnt3Q6L8S8 986 aa17.99■□□□□ 0.47
Ccdc85a-201ENSMUST00000042534 Tmf1B9EKI3 1091 aa17.99■□□□□ 0.47
Ccdc85a-201ENSMUST00000042534 Supt16hQ920B9 1047 aa17.98■□□□□ 0.47
Ccdc85a-201ENSMUST00000042534 Mak16Q8BGS0 296 aaKnown RBP17.97■□□□□ 0.47
Ccdc85a-201ENSMUST00000042534 Lmod3E9QA62 571 aa17.97■□□□□ 0.47
Ccdc85a-201ENSMUST00000042534 Sin3aQ60520 1274 aaKnown RBP17.96■□□□□ 0.47
Ccdc85a-201ENSMUST00000042534 Cabp1Q9JLK7 227 aa17.95■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Rpap1Q80TE0 1409 aa17.95■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Carmil1Q6EDY6 1374 aa17.95■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Dhx57Q6P5D3 1388 aaKnown RBP17.94■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Irx6Q9ER75 438 aa17.94■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Ythdc1E9Q5K9 736 aaKnown RBP17.93■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Chmp5Q9D7S9 219 aa17.93■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms