RNA–Protein interactions for RNA: ENSMUST00000033544.13

Brcc3-201, Transcript of Lys-63-specific deubiquitinase BRCC36, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Brcc3, Length 4,310 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Brcc3-201ENSMUST00000033544 Supt16hQ920B9 1047 aa13.67□□□□□ -0.22
Brcc3-201ENSMUST00000033544 Slc4a3P16283 1227 aa13.65□□□□□ -0.22
Brcc3-201ENSMUST00000033544 Eea1Q8BL66 1411 aa13.64□□□□□ -0.23
Brcc3-201ENSMUST00000033544 Top2aQ01320 1528 aaKnown RBP13.63□□□□□ -0.23
Brcc3-201ENSMUST00000033544 Chic2Q9D9G3 165 aa13.63□□□□□ -0.23
Brcc3-201ENSMUST00000033544 Wdr43Q6ZQL4 677 aaKnown RBP13.61□□□□□ -0.23
Brcc3-201ENSMUST00000033544 Mrs2Q5NCE8 434 aa13.6□□□□□ -0.23
Brcc3-201ENSMUST00000033544 Arap1Q4LDD4 1452 aa13.59□□□□□ -0.23
Brcc3-201ENSMUST00000033544 Cttnbp2B9EJA2 1648 aa13.59□□□□□ -0.23
Brcc3-201ENSMUST00000033544 Baz1bQ9Z277 1479 aa13.57□□□□□ -0.24
Brcc3-201ENSMUST00000033544 BicraF8VPZ9 1578 aa13.56□□□□□ -0.24
Brcc3-201ENSMUST00000033544 Pak3Q61036 559 aa13.55□□□□□ -0.24
Brcc3-201ENSMUST00000033544 Wwc2Q6NXJ0 1187 aa13.55□□□□□ -0.24
Brcc3-201ENSMUST00000033544 NrdcQ8BHG1 1161 aa13.55□□□□□ -0.24
Brcc3-201ENSMUST00000033544 PtprkP35822 1457 aa13.54□□□□□ -0.24
Brcc3-201ENSMUST00000033544 Gm13697A2AK42 830 aa13.5□□□□□ -0.25
Brcc3-201ENSMUST00000033544 Arhgap35Q91YM2 1499 aa13.5□□□□□ -0.25
Brcc3-201ENSMUST00000033544 Rtl5Q5DTT4 599 aa13.48□□□□□ -0.25
Brcc3-201ENSMUST00000033544 AqrQ8CFQ3 1481 aaKnown RBP13.45□□□□□ -0.26
Brcc3-201ENSMUST00000033544 Zbtb4Q5F293 982 aa13.45□□□□□ -0.26
Brcc3-201ENSMUST00000033544 Amer1Q7TS75 1132 aa13.45□□□□□ -0.26
Brcc3-201ENSMUST00000033544 Smarca4Q3TKT4 1613 aaKnown RBP13.44□□□□□ -0.26
Brcc3-201ENSMUST00000033544 Ccdc18Q640L5 1455 aa13.43□□□□□ -0.26
Brcc3-201ENSMUST00000033544 Smg6P61406 1418 aaKnown RBP13.42□□□□□ -0.26
Brcc3-201ENSMUST00000033544 Kcnh8P59111 1102 aa13.41□□□□□ -0.26
Brcc3-201ENSMUST00000033544 Exoc6Q8R313 802 aa13.41□□□□□ -0.26
Brcc3-201ENSMUST00000033544 Kif15Q6P9L6 1387 aa13.4□□□□□ -0.26
Brcc3-201ENSMUST00000033544 Arhgef5E9Q7D5 1581 aa13.4□□□□□ -0.27
Brcc3-201ENSMUST00000033544 Kdm5bQ80Y84 1544 aa13.39□□□□□ -0.27
Brcc3-201ENSMUST00000033544 Naip1Q9QWK5 1403 aa13.38□□□□□ -0.27
Brcc3-201ENSMUST00000033544 4933416C03RikQ3V063 378 aa13.36□□□□□ -0.27
Brcc3-201ENSMUST00000033544 Slc4a2P13808 1237 aaKnown RBP13.35□□□□□ -0.27
Brcc3-201ENSMUST00000033544 Hdac5Q9Z2V6 1113 aa13.34□□□□□ -0.27
Brcc3-201ENSMUST00000033544 Ccer2J3QPU5 274 aa13.32□□□□□ -0.28
Brcc3-201ENSMUST00000033544 DaxxO35613 739 aa13.32□□□□□ -0.28
Brcc3-201ENSMUST00000033544 Ofd1Q80Z25 1017 aa13.32□□□□□ -0.28
Brcc3-201ENSMUST00000033544 Liat1Q810M6 228 aa13.32□□□□□ -0.28
Brcc3-201ENSMUST00000033544 Zbtb7cQ8VCZ7 619 aa13.31□□□□□ -0.28
Brcc3-201ENSMUST00000033544 Washc2Q6PGL7 1334 aa13.31□□□□□ -0.28
Brcc3-201ENSMUST00000033544 Dhx29Q6PGC1 1365 aaKnown RBP13.3□□□□□ -0.28
Brcc3-201ENSMUST00000033544 Rad21Q61550 635 aaKnown RBP13.29□□□□□ -0.28
Brcc3-201ENSMUST00000033544 Tiam1Q60610 1591 aa13.29□□□□□ -0.28
Brcc3-201ENSMUST00000033544 Arhgap27A2AB59 869 aa13.28□□□□□ -0.28
Brcc3-201ENSMUST00000033544 Iqgap2Q3UQ44 1575 aa13.28□□□□□ -0.28
Brcc3-201ENSMUST00000033544 3425401B19RikD3Z1D3 1412 aa13.28□□□□□ -0.28
Brcc3-201ENSMUST00000033544 Eif4g1Q6NZJ6 1600 aaKnown RBP13.27□□□□□ -0.28
Brcc3-201ENSMUST00000033544 ChgaP26339 463 aaKnown RBP13.27□□□□□ -0.28
Brcc3-201ENSMUST00000033544 Npm1Q61937 292 aaKnown RBP13.27□□□□□ -0.28
Brcc3-201ENSMUST00000033544 Ccdc27Q3V036 639 aa13.27□□□□□ -0.29
Brcc3-201ENSMUST00000033544 Upf2A2AT37 1269 aaKnown RBP13.26□□□□□ -0.29
Brcc3-201ENSMUST00000033544 Rgl3Q3UYI5 709 aa13.26□□□□□ -0.29
Brcc3-201ENSMUST00000033544 Aebp1Q640N1 1128 aa13.25□□□□□ -0.29
Brcc3-201ENSMUST00000033544 UacaQ8CGB3 1411 aa13.24□□□□□ -0.29
Brcc3-201ENSMUST00000033544 Zfp644E9QA22 1323 aa13.24□□□□□ -0.29
Brcc3-201ENSMUST00000033544 Slx4Q6P1D7 1565 aa13.24□□□□□ -0.29
Brcc3-201ENSMUST00000033544 Egfem1Q8C088 590 aa13.24□□□□□ -0.29
Brcc3-201ENSMUST00000033544 Mia2Q91ZV0 1396 aa13.23□□□□□ -0.29
Brcc3-201ENSMUST00000033544 TchhA0A0B4J1F9 1599 aa13.23□□□□□ -0.29
Brcc3-201ENSMUST00000033544 Mphosph9A6H5Y1 991 aa13.23□□□□□ -0.29
Brcc3-201ENSMUST00000033544 NrkQ9R0G8 1455 aa13.21□□□□□ -0.29
Brcc3-201ENSMUST00000033544 Shroom4Q1W617 1475 aa13.21□□□□□ -0.3
Brcc3-201ENSMUST00000033544 ArxO35085 564 aa13.2□□□□□ -0.3
Brcc3-201ENSMUST00000033544 Grwd1Q810D6 446 aaKnown RBP13.2□□□□□ -0.3
Brcc3-201ENSMUST00000033544 Pkd2O35245 966 aa13.2□□□□□ -0.3
Brcc3-201ENSMUST00000033544 Fyco1Q8VDC1 1437 aa13.19□□□□□ -0.3
Brcc3-201ENSMUST00000033544 Pcf11G3X9Z4 1553 aa13.18□□□□□ -0.3
Brcc3-201ENSMUST00000033544 B4galnt3Q6L8S8 986 aa13.18□□□□□ -0.3
Brcc3-201ENSMUST00000033544 Cabp1Q9JLK7 227 aa13.18□□□□□ -0.3
Brcc3-201ENSMUST00000033544 Fhad1A6PWD2 1420 aa13.18□□□□□ -0.3
Brcc3-201ENSMUST00000033544 NeflP08551 543 aa13.18□□□□□ -0.3
Brcc3-201ENSMUST00000033544 Hsp90aa1P07901 733 aaKnown RBP13.17□□□□□ -0.3
Brcc3-201ENSMUST00000033544 Plcd4Q8K3R3 807 aa13.17□□□□□ -0.3
Brcc3-201ENSMUST00000033544 L3mbtl2P59178 703 aa13.17□□□□□ -0.3
Brcc3-201ENSMUST00000033544 Dbr1Q923B1 550 aa13.17□□□□□ -0.3
Brcc3-201ENSMUST00000033544 CntlnA2AM05 1397 aa13.16□□□□□ -0.3
Brcc3-201ENSMUST00000033544 Gm13695A2AK44 830 aa13.16□□□□□ -0.3
Brcc3-201ENSMUST00000033544 Ipo9Q91YE6 1041 aa13.15□□□□□ -0.3
Brcc3-201ENSMUST00000033544 Ankrd36D3Z4K0 1415 aa13.15□□□□□ -0.3
Brcc3-201ENSMUST00000033544 Tcerg1Q8CGF7 1100 aaKnown RBP13.14□□□□□ -0.31
Brcc3-201ENSMUST00000033544 Ccnb3Q810T2 1396 aa13.14□□□□□ -0.31
Brcc3-201ENSMUST00000033544 Gtf3c3Q3TMP1 882 aa13.14□□□□□ -0.31
Brcc3-201ENSMUST00000033544 Naip5Q9R016 1403 aa13.13□□□□□ -0.31
Brcc3-201ENSMUST00000033544 Ankrd26Q811D2 1581 aa13.13□□□□□ -0.31
Brcc3-201ENSMUST00000033544 Usp47Q8BY87 1376 aa13.12□□□□□ -0.31
Brcc3-201ENSMUST00000033544 Mroh2bQ7M6Y6 1581 aa13.12□□□□□ -0.31
Brcc3-201ENSMUST00000033544 Vps8Q0P5W1 1427 aa13.11□□□□□ -0.31
Brcc3-201ENSMUST00000033544 Apbb1Q9QXJ1 710 aa13.11□□□□□ -0.31
Brcc3-201ENSMUST00000033544 Rundc1Q0VDN7 615 aa13.1□□□□□ -0.31
Brcc3-201ENSMUST00000033544 Cux1P53564 1515 aa13.1□□□□□ -0.31
Brcc3-201ENSMUST00000033544 CanxP35564 591 aaKnown RBP13.09□□□□□ -0.31
Brcc3-201ENSMUST00000033544 Ubl4bQ9CQ84 188 aa13.09□□□□□ -0.31
Brcc3-201ENSMUST00000033544 PnisrA2AJT4 805 aaKnown RBP13.09□□□□□ -0.31
Brcc3-201ENSMUST00000033544 Irx3P81067 507 aa13.09□□□□□ -0.31
Brcc3-201ENSMUST00000033544 Naip2Q9QUK4 1447 aa13.09□□□□□ -0.31
Brcc3-201ENSMUST00000033544 Prdm10Q3UTQ7 1184 aa13.09□□□□□ -0.31
Brcc3-201ENSMUST00000033544 Gm7298A0A0N4SVU1 1476 aa13.08□□□□□ -0.32
Brcc3-201ENSMUST00000033544 Atad2bE9Q166 1460 aaKnown RBP13.08□□□□□ -0.32
Brcc3-201ENSMUST00000033544 A2mQ6GQT1 1474 aa13.08□□□□□ -0.32
Brcc3-201ENSMUST00000033544 Card11Q8CIS0 1159 aa13.07□□□□□ -0.32
Brcc3-201ENSMUST00000033544 Anp32bQ9EST5 272 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 129.3 ms