RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Carmil1Q6EDY6 1374 aa30.25■■■□□ 2.43
Ctdsp1-201ENSMUST00000027367 Kif21aQ9QXL2 1672 aa30.25■■■□□ 2.43
Ctdsp1-201ENSMUST00000027367 Myt1Q8CFC2 1127 aa30.21■■■□□ 2.43
Ctdsp1-201ENSMUST00000027367 SynmQ70IV5 1561 aa30.2■■■□□ 2.43
Ctdsp1-201ENSMUST00000027367 Crocc2F6XLV1 1638 aa30.18■■■□□ 2.42
Ctdsp1-201ENSMUST00000027367 Tiam1Q60610 1591 aa30.17■■■□□ 2.42
Ctdsp1-201ENSMUST00000027367 Cux1P53564 1515 aa30.17■■■□□ 2.42
Ctdsp1-201ENSMUST00000027367 Ncapd3Q6ZQK0 1506 aa30.15■■■□□ 2.42
Ctdsp1-201ENSMUST00000027367 Pcf11G3X9Z4 1553 aa30.14■■■□□ 2.42
Ctdsp1-201ENSMUST00000027367 Rad54l2Q99NG0 1466 aa30.1■■■□□ 2.41
Ctdsp1-201ENSMUST00000027367 1700123L14RikQ3V2K7 440 aa30.1■■■□□ 2.41
Ctdsp1-201ENSMUST00000027367 Lmo7E9PYF4 1699 aaKnown RBP30.09■■■□□ 2.41
Ctdsp1-201ENSMUST00000027367 Naip1Q9QWK5 1403 aa30.08■■■□□ 2.41
Ctdsp1-201ENSMUST00000027367 CenpbP27790 599 aa30.03■■■□□ 2.4
Ctdsp1-201ENSMUST00000027367 Slx4Q6P1D7 1565 aa30.02■■■□□ 2.4
Ctdsp1-201ENSMUST00000027367 Urb2E9Q7L1 1524 aaKnown RBP30.01■■■□□ 2.4
Ctdsp1-201ENSMUST00000027367 BlmO88700 1416 aa29.99■■■□□ 2.39
Ctdsp1-201ENSMUST00000027367 Polr1aO35134 1717 aaKnown RBP29.97■■■□□ 2.39
Ctdsp1-201ENSMUST00000027367 Fyco1Q8VDC1 1437 aa29.97■■■□□ 2.39
Ctdsp1-201ENSMUST00000027367 CntlnA2AM05 1397 aa29.92■■■□□ 2.38
Ctdsp1-201ENSMUST00000027367 Plb1Q3TTY0 1478 aa29.9■■■□□ 2.38
Ctdsp1-201ENSMUST00000027367 Pla2r1Q62028 1487 aa29.9■■■□□ 2.38
Ctdsp1-201ENSMUST00000027367 Magi3Q9EQJ9 1476 aa29.87■■■□□ 2.37
Ctdsp1-201ENSMUST00000027367 Rpap1Q80TE0 1409 aa29.86■■■□□ 2.37
Ctdsp1-201ENSMUST00000027367 EprsQ8CGC7 1512 aaKnown RBP29.84■■■□□ 2.37
Ctdsp1-201ENSMUST00000027367 Peg3Q3URU2 1571 aa29.83■■■□□ 2.37
Ctdsp1-201ENSMUST00000027367 Lmod2Q3UHZ5 550 aa29.81■■■□□ 2.36
Ctdsp1-201ENSMUST00000027367 Aebp1Q640N1 1128 aa29.8■■■□□ 2.36
Ctdsp1-201ENSMUST00000027367 Grin2aP35436 1464 aa29.79■■■□□ 2.36
Ctdsp1-201ENSMUST00000027367 Disp1Q3TDN0 1521 aa29.77■■■□□ 2.36
Ctdsp1-201ENSMUST00000027367 Anks4bQ8K3X6 423 aa29.75■■■□□ 2.35
Ctdsp1-201ENSMUST00000027367 Kdm5bQ80Y84 1544 aa29.74■■■□□ 2.35
Ctdsp1-201ENSMUST00000027367 TchhA0A0B4J1F9 1599 aa29.73■■■□□ 2.35
Ctdsp1-201ENSMUST00000027367 Setd1bQ8CFT2 1985 aa29.7■■■□□ 2.35
Ctdsp1-201ENSMUST00000027367 CadpsQ80TJ1 1355 aa29.69■■■□□ 2.34
Ctdsp1-201ENSMUST00000027367 Abca5Q8K448 1642 aa29.69■■■□□ 2.34
Ctdsp1-201ENSMUST00000027367 Csrnp3P59055 597 aa29.68■■■□□ 2.34
Ctdsp1-201ENSMUST00000027367 Gm1043A0A140LJC2 1431 aa29.67■■■□□ 2.34
Ctdsp1-201ENSMUST00000027367 WizO88286 1684 aaKnown RBP29.65■■■□□ 2.34
Ctdsp1-201ENSMUST00000027367 Gm7298A0A0N4SVU1 1476 aa29.65■■■□□ 2.34
Ctdsp1-201ENSMUST00000027367 TonslQ6NZL6 1363 aa29.63■■■□□ 2.33
Ctdsp1-201ENSMUST00000027367 Adamts12Q811B3 1600 aa29.63■■■□□ 2.33
Ctdsp1-201ENSMUST00000027367 Ift140E9PY46 1464 aa29.61■■■□□ 2.33
Ctdsp1-201ENSMUST00000027367 Gpatch8A2A6A1 1505 aa29.6■■■□□ 2.33
Ctdsp1-201ENSMUST00000027367 3425401B19RikD3Z1D3 1412 aa29.59■■■□□ 2.33
Ctdsp1-201ENSMUST00000027367 DiexfQ8BTT6 772 aaKnown RBP29.59■■■□□ 2.33
Ctdsp1-201ENSMUST00000027367 Sall2Q9QX96 1004 aa29.58■■■□□ 2.33
Ctdsp1-201ENSMUST00000027367 Lrriq1Q0P5X1 1673 aa29.56■■■□□ 2.32
Ctdsp1-201ENSMUST00000027367 Pbrm1Q8BSQ9 1634 aaKnown RBP29.55■■■□□ 2.32
Ctdsp1-201ENSMUST00000027367 Nup160Q9Z0W3 1402 aaKnown RBP29.54■■■□□ 2.32
Ctdsp1-201ENSMUST00000027367 PxdnQ3UQ28 1475 aa29.51■■■□□ 2.32
Ctdsp1-201ENSMUST00000027367 Fam50aQ9WV03 339 aaKnown RBP29.51■■■□□ 2.31
Ctdsp1-201ENSMUST00000027367 Aebp2Q9Z248 504 aaKnown RBP29.5■■■□□ 2.31
Ctdsp1-201ENSMUST00000027367 Soga1E1U8D0 1418 aa29.49■■■□□ 2.31
Ctdsp1-201ENSMUST00000027367 Abca16E9PWJ7 1678 aa29.49■■■□□ 2.31
Ctdsp1-201ENSMUST00000027367 Kif27Q7M6Z4 1394 aa29.46■■■□□ 2.31
Ctdsp1-201ENSMUST00000027367 Aplp2Q06335 707 aa29.45■■■□□ 2.3
Ctdsp1-201ENSMUST00000027367 Wdr66E9Q743 1299 aa29.44■■■□□ 2.3
Ctdsp1-201ENSMUST00000027367 Eid3Q3V124 375 aa29.44■■■□□ 2.3
Ctdsp1-201ENSMUST00000027367 Lmtk2Q3TYD6 1471 aa29.37■■■□□ 2.29
Ctdsp1-201ENSMUST00000027367 Ccnb3Q810T2 1396 aa29.36■■■□□ 2.29
Ctdsp1-201ENSMUST00000027367 Cc2d2bA0A286YDU8 1405 aa29.33■■■□□ 2.29
Ctdsp1-201ENSMUST00000027367 Fhad1A6PWD2 1420 aa29.32■■■□□ 2.28
Ctdsp1-201ENSMUST00000027367 WrnO09053 1401 aa29.32■■■□□ 2.28
Ctdsp1-201ENSMUST00000027367 BC005561E9Q5E2 1589 aa29.32■■■□□ 2.28
Ctdsp1-201ENSMUST00000027367 Mia2Q91ZV0 1396 aa29.32■■■□□ 2.28
Ctdsp1-201ENSMUST00000027367 Naip2Q9QUK4 1447 aa29.31■■■□□ 2.28
Ctdsp1-201ENSMUST00000027367 A2mQ6GQT1 1474 aa29.3■■■□□ 2.28
Ctdsp1-201ENSMUST00000027367 NexmifQ5DTT1 1515 aa29.3■■■□□ 2.28
Ctdsp1-201ENSMUST00000027367 Abcc2Q8VI47 1543 aa29.27■■■□□ 2.28
Ctdsp1-201ENSMUST00000027367 Arhgap27A2AB59 869 aa29.27■■■□□ 2.28
Ctdsp1-201ENSMUST00000027367 Gcc2Q8CHG3 1679 aa29.26■■■□□ 2.28
Ctdsp1-201ENSMUST00000027367 ClspnQ80YR7 1315 aa29.25■■■□□ 2.27
Ctdsp1-201ENSMUST00000027367 Vps8Q0P5W1 1427 aa29.25■■■□□ 2.27
Ctdsp1-201ENSMUST00000027367 Shroom2A2ALU4 1481 aa29.2■■■□□ 2.26
Ctdsp1-201ENSMUST00000027367 Rapgef6Q5NCJ1 1609 aa29.19■■■□□ 2.26
Ctdsp1-201ENSMUST00000027367 Bcl11aQ9QYE3 773 aa29.17■■■□□ 2.26
Ctdsp1-201ENSMUST00000027367 Rusc2Q80U22 1514 aa29.17■■■□□ 2.26
Ctdsp1-201ENSMUST00000027367 Mug1P28665 1476 aa29.15■■■□□ 2.26
Ctdsp1-201ENSMUST00000027367 Ncoa3O09000 1398 aa29.13■■■□□ 2.25
Ctdsp1-201ENSMUST00000027367 Ccer2J3QPU5 274 aa29.13■■■□□ 2.25
Ctdsp1-201ENSMUST00000027367 Chic2Q9D9G3 165 aa29.12■■■□□ 2.25
Ctdsp1-201ENSMUST00000027367 Ppargc1bQ8VHJ7 1014 aa29.11■■■□□ 2.25
Ctdsp1-201ENSMUST00000027367 Ankrd36D3Z4K0 1415 aa29.07■■■□□ 2.24
Ctdsp1-201ENSMUST00000027367 Arhgef11Q68FM7 1552 aa29.07■■■□□ 2.24
Ctdsp1-201ENSMUST00000027367 Eif4g3Q80XI3 1579 aaKnown RBP29.06■■■□□ 2.24
Ctdsp1-201ENSMUST00000027367 Dennd4bQ3U1Y4 1499 aa29.05■■■□□ 2.24
Ctdsp1-201ENSMUST00000027367 UacaQ8CGB3 1411 aa29.04■■■□□ 2.24
Ctdsp1-201ENSMUST00000027367 Cdc42bpaQ3UU96 1719 aa29.02■■■□□ 2.24
Ctdsp1-201ENSMUST00000027367 Arhgap31A6X8Z5 1425 aa29.01■■■□□ 2.24
Ctdsp1-201ENSMUST00000027367 Map3k4O08648 1597 aa29.01■■■□□ 2.23
Ctdsp1-201ENSMUST00000027367 Dnmt1P13864 1620 aaKnown RBP28.96■■■□□ 2.23
Ctdsp1-201ENSMUST00000027367 Arhgef40Q3UPH7 1517 aa28.96■■■□□ 2.23
Ctdsp1-201ENSMUST00000027367 Ube2uB1AUC4 352 aa28.95■■■□□ 2.23
Ctdsp1-201ENSMUST00000027367 Kiaa1551Q5DTW7 1521 aa28.94■■■□□ 2.22
Ctdsp1-201ENSMUST00000027367 Zcchc11B2RX14 1644 aaKnown RBP28.94■■■□□ 2.22
Ctdsp1-201ENSMUST00000027367 Hspa5P20029 655 aaKnown RBP28.93■■■□□ 2.22
Ctdsp1-201ENSMUST00000027367 Ncoa2Q61026 1462 aa28.92■■■□□ 2.22
Ctdsp1-201ENSMUST00000027367 Abcc5Q9R1X5 1436 aa28.91■■■□□ 2.22
Ctdsp1-201ENSMUST00000027367 Ccdc141E9Q8Q6 1531 aa28.91■■■□□ 2.22
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms