RNA–Protein interactions for RNA: ENSMUST00000026269.3

Limd1-201, Transcript of LIM domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Limd1, Length 4,848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limd1-201ENSMUST00000026269 Chic2Q9D9G3 165 aa15.2■□□□□ 0.02
Limd1-201ENSMUST00000026269 Calr4Q3TQS0 420 aa15.19■□□□□ 0.02
Limd1-201ENSMUST00000026269 Fam71e1A1L3C1 212 aa15.18■□□□□ 0.02
Limd1-201ENSMUST00000026269 Gm13697A2AK42 830 aa15.15■□□□□ 0.02
Limd1-201ENSMUST00000026269 Top2aQ01320 1528 aaKnown RBP15.14■□□□□ 0.01
Limd1-201ENSMUST00000026269 Ttbk1Q6PCN3 1308 aa15.14■□□□□ 0.01
Limd1-201ENSMUST00000026269 Hdac5Q9Z2V6 1113 aa15.13■□□□□ 0.01
Limd1-201ENSMUST00000026269 Rtl5Q5DTT4 599 aa15.13■□□□□ 0.01
Limd1-201ENSMUST00000026269 Top2bQ64511 1612 aa15.12■□□□□ 0.01
Limd1-201ENSMUST00000026269 Erich6D3Z6S9 713 aa15.12■□□□□ 0.01
Limd1-201ENSMUST00000026269 Hspa5P20029 655 aaKnown RBP15.1■□□□□ 0.01
Limd1-201ENSMUST00000026269 Baz1bQ9Z277 1479 aa15.07■□□□□ 0
Limd1-201ENSMUST00000026269 Mrs2Q5NCE8 434 aa15.06■□□□□ 0
Limd1-201ENSMUST00000026269 BicraF8VPZ9 1578 aa15.06■□□□□ 0
Limd1-201ENSMUST00000026269 Ppp4r2Q0VGB7 417 aa15.05■□□□□ -0
Limd1-201ENSMUST00000026269 DiexfQ8BTT6 772 aaKnown RBP15.03■□□□□ -0
Limd1-201ENSMUST00000026269 NeflP08551 543 aa15.03■□□□□ -0
Limd1-201ENSMUST00000026269 Ncapd3Q6ZQK0 1506 aa15.01□□□□□ -0.01
Limd1-201ENSMUST00000026269 Iqgap2Q3UQ44 1575 aa15.01□□□□□ -0.01
Limd1-201ENSMUST00000026269 Atad2bE9Q166 1460 aaKnown RBP15□□□□□ -0.01
Limd1-201ENSMUST00000026269 Zbtb4Q5F293 982 aa15□□□□□ -0.01
Limd1-201ENSMUST00000026269 Mia2Q91ZV0 1396 aa15□□□□□ -0.01
Limd1-201ENSMUST00000026269 Atp1b4Q99ME6 356 aa14.99□□□□□ -0.01
Limd1-201ENSMUST00000026269 Arhgap27A2AB59 869 aa14.99□□□□□ -0.01
Limd1-201ENSMUST00000026269 Clstn2Q9ER65 966 aa14.99□□□□□ -0.01
Limd1-201ENSMUST00000026269 Wdr43Q6ZQL4 677 aaKnown RBP14.98□□□□□ -0.01
Limd1-201ENSMUST00000026269 Sin3aQ60520 1274 aaKnown RBP14.95□□□□□ -0.02
Limd1-201ENSMUST00000026269 Arhgap35Q91YM2 1499 aa14.95□□□□□ -0.02
Limd1-201ENSMUST00000026269 Arap1Q4LDD4 1452 aa14.92□□□□□ -0.02
Limd1-201ENSMUST00000026269 P3h3Q8CG70 732 aa14.92□□□□□ -0.02
Limd1-201ENSMUST00000026269 Phldb1Q6PDH0 1371 aaKnown RBP14.92□□□□□ -0.02
Limd1-201ENSMUST00000026269 Fyco1Q8VDC1 1437 aa14.9□□□□□ -0.02
Limd1-201ENSMUST00000026269 CntlnA2AM05 1397 aa14.9□□□□□ -0.02
Limd1-201ENSMUST00000026269 Gm13695A2AK44 830 aa14.9□□□□□ -0.02
Limd1-201ENSMUST00000026269 Aebp1Q640N1 1128 aa14.89□□□□□ -0.03
Limd1-201ENSMUST00000026269 Amer1Q7TS75 1132 aa14.89□□□□□ -0.03
Limd1-201ENSMUST00000026269 Cux2P70298 1426 aa14.88□□□□□ -0.03
Limd1-201ENSMUST00000026269 Plppr3Q7TPB0 716 aa14.87□□□□□ -0.03
Limd1-201ENSMUST00000026269 PtprkP35822 1457 aa14.86□□□□□ -0.03
Limd1-201ENSMUST00000026269 4933416C03RikQ3V063 378 aa14.85□□□□□ -0.03
Limd1-201ENSMUST00000026269 Shroom4Q1W617 1475 aa14.84□□□□□ -0.03
Limd1-201ENSMUST00000026269 Rgl3Q3UYI5 709 aa14.83□□□□□ -0.03
Limd1-201ENSMUST00000026269 Nlrp6Q91WS2 869 aa14.82□□□□□ -0.04
Limd1-201ENSMUST00000026269 Arhgef5E9Q7D5 1581 aa14.82□□□□□ -0.04
Limd1-201ENSMUST00000026269 Carmil1Q6EDY6 1374 aa14.82□□□□□ -0.04
Limd1-201ENSMUST00000026269 Wwc2Q6NXJ0 1187 aa14.81□□□□□ -0.04
Limd1-201ENSMUST00000026269 Naip1Q9QWK5 1403 aa14.81□□□□□ -0.04
Limd1-201ENSMUST00000026269 Prdm10Q3UTQ7 1184 aa14.79□□□□□ -0.04
Limd1-201ENSMUST00000026269 Ofd1Q80Z25 1017 aa14.77□□□□□ -0.05
Limd1-201ENSMUST00000026269 Znf710Q3U288 666 aa14.77□□□□□ -0.05
Limd1-201ENSMUST00000026269 Mphosph9A6H5Y1 991 aa14.76□□□□□ -0.05
Limd1-201ENSMUST00000026269 Kif27Q7M6Z4 1394 aa14.75□□□□□ -0.05
Limd1-201ENSMUST00000026269 Pkd2O35245 966 aa14.75□□□□□ -0.05
Limd1-201ENSMUST00000026269 Nolc1E9Q5C9 702 aaKnown RBP14.75□□□□□ -0.05
Limd1-201ENSMUST00000026269 NrkQ9R0G8 1455 aa14.74□□□□□ -0.05
Limd1-201ENSMUST00000026269 Smg6P61406 1418 aaKnown RBP14.74□□□□□ -0.05
Limd1-201ENSMUST00000026269 Mtus2Q3UHD3 1353 aa14.73□□□□□ -0.05
Limd1-201ENSMUST00000026269 Rad21Q61550 635 aaKnown RBP14.73□□□□□ -0.05
Limd1-201ENSMUST00000026269 Exoc6Q8R313 802 aa14.73□□□□□ -0.05
Limd1-201ENSMUST00000026269 Tiam1Q60610 1591 aa14.72□□□□□ -0.05
Limd1-201ENSMUST00000026269 Map3k1P53349 1493 aa14.72□□□□□ -0.05
Limd1-201ENSMUST00000026269 Safb2Q80YR5 991 aaKnown RBP14.72□□□□□ -0.05
Limd1-201ENSMUST00000026269 Grwd1Q810D6 446 aaKnown RBP14.72□□□□□ -0.05
Limd1-201ENSMUST00000026269 Cabp1Q9JLK7 227 aa14.71□□□□□ -0.05
Limd1-201ENSMUST00000026269 Fhad1A6PWD2 1420 aa14.71□□□□□ -0.05
Limd1-201ENSMUST00000026269 Supt16hQ920B9 1047 aa14.71□□□□□ -0.05
Limd1-201ENSMUST00000026269 Ccnb3Q810T2 1396 aa14.71□□□□□ -0.05
Limd1-201ENSMUST00000026269 Ankrd36D3Z4K0 1415 aa14.7□□□□□ -0.06
Limd1-201ENSMUST00000026269 Card11Q8CIS0 1159 aa14.69□□□□□ -0.06
Limd1-201ENSMUST00000026269 Rrp7aQ9D1C9 280 aaKnown RBP14.69□□□□□ -0.06
Limd1-201ENSMUST00000026269 Bcl11aQ9QYE3 773 aa14.69□□□□□ -0.06
Limd1-201ENSMUST00000026269 LrpprcQ6PB66 1392 aaKnown RBP14.68□□□□□ -0.06
Limd1-201ENSMUST00000026269 DaxxO35613 739 aa14.68□□□□□ -0.06
Limd1-201ENSMUST00000026269 Cwc22Q8C5N3 908 aaKnown RBP14.68□□□□□ -0.06
Limd1-201ENSMUST00000026269 Rpap1Q80TE0 1409 aa14.68□□□□□ -0.06
Limd1-201ENSMUST00000026269 Slc4a3P16283 1227 aa14.67□□□□□ -0.06
Limd1-201ENSMUST00000026269 Mroh2bQ7M6Y6 1581 aa14.66□□□□□ -0.06
Limd1-201ENSMUST00000026269 Frmpd1A2AKB4 1549 aa14.65□□□□□ -0.06
Limd1-201ENSMUST00000026269 Grin2bQ01097 1482 aa14.65□□□□□ -0.06
Limd1-201ENSMUST00000026269 Vps8Q0P5W1 1427 aa14.64□□□□□ -0.07
Limd1-201ENSMUST00000026269 Upf2A2AT37 1269 aaKnown RBP14.64□□□□□ -0.07
Limd1-201ENSMUST00000026269 AknaQ80VW7 1404 aa14.64□□□□□ -0.07
Limd1-201ENSMUST00000026269 UacaQ8CGB3 1411 aa14.64□□□□□ -0.07
Limd1-201ENSMUST00000026269 AqrQ8CFQ3 1481 aaKnown RBP14.62□□□□□ -0.07
Limd1-201ENSMUST00000026269 Rundc1Q0VDN7 615 aa14.61□□□□□ -0.07
Limd1-201ENSMUST00000026269 Dhx29Q6PGC1 1365 aaKnown RBP14.6□□□□□ -0.07
Limd1-201ENSMUST00000026269 Efcab5A0JP43 1406 aa14.6□□□□□ -0.07
Limd1-201ENSMUST00000026269 Mroh3A0A1D5RM54 893 aa14.59□□□□□ -0.07
Limd1-201ENSMUST00000026269 Usp47Q8BY87 1376 aa14.59□□□□□ -0.07
Limd1-201ENSMUST00000026269 Camsap1A2AHC3 1581 aa14.58□□□□□ -0.07
Limd1-201ENSMUST00000026269 Pcf11G3X9Z4 1553 aa14.57□□□□□ -0.08
Limd1-201ENSMUST00000026269 Polr3glQ8R0C0 218 aa14.57□□□□□ -0.08
Limd1-201ENSMUST00000026269 Cux1P53564 1515 aa14.56□□□□□ -0.08
Limd1-201ENSMUST00000026269 Kdm2aP59997 1161 aa14.55□□□□□ -0.08
Limd1-201ENSMUST00000026269 Trak1Q6PD31 939 aa14.55□□□□□ -0.08
Limd1-201ENSMUST00000026269 Lamc3Q9R0B6 1581 aa14.54□□□□□ -0.08
Limd1-201ENSMUST00000026269 Plekhh2Q8C115 1491 aa14.53□□□□□ -0.08
Limd1-201ENSMUST00000026269 Wdr62Q3U3T8 1523 aa14.53□□□□□ -0.08
Limd1-201ENSMUST00000026269 Srpk2O54781 681 aaKnown RBP14.53□□□□□ -0.08
Limd1-201ENSMUST00000026269 TchhA0A0B4J1F9 1599 aa14.52□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms