RNA–Protein interactions for RNA: ENSMUST00000022474.13

Pbrm1-202, Transcript of Protein polybromo-1, mousemouse

TSL 5 BASIC

Gene Pbrm1, Length 4,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pbrm1-202ENSMUST00000022474 Col17a1Q07563 1470 aa8.49□□□□□ -1.05
Pbrm1-202ENSMUST00000022474 Ppp4r2Q0VGB7 417 aa8.49□□□□□ -1.05
Pbrm1-202ENSMUST00000022474 Ap3b1Q9Z1T1 1105 aa8.45□□□□□ -1.06
Pbrm1-202ENSMUST00000022474 Wdr43Q6ZQL4 677 aaKnown RBP8.45□□□□□ -1.06
Pbrm1-202ENSMUST00000022474 Ccdc27Q3V036 639 aa8.43□□□□□ -1.06
Pbrm1-202ENSMUST00000022474 Fam50aQ9WV03 339 aaKnown RBP8.42□□□□□ -1.06
Pbrm1-202ENSMUST00000022474 Irx3P81067 507 aa8.42□□□□□ -1.06
Pbrm1-202ENSMUST00000022474 PrkcshO08795 521 aa8.39□□□□□ -1.07
Pbrm1-202ENSMUST00000022474 Pabpn1Q8CCS6 302 aaKnown RBP8.38□□□□□ -1.07
Pbrm1-202ENSMUST00000022474 Brd4Q9ESU6 1400 aaKnown RBP8.37□□□□□ -1.07
Pbrm1-202ENSMUST00000022474 Arhgef5E9Q7D5 1581 aa8.36□□□□□ -1.07
Pbrm1-202ENSMUST00000022474 Cep164Q5DU05 1446 aa8.35□□□□□ -1.07
Pbrm1-202ENSMUST00000022474 SafbD3YXK2 937 aaKnown RBP8.35□□□□□ -1.07
Pbrm1-202ENSMUST00000022474 Aebp2Q9Z248 504 aaKnown RBP8.34□□□□□ -1.07
Pbrm1-202ENSMUST00000022474 Cecr2E9Q2Z1 1453 aa8.34□□□□□ -1.07
Pbrm1-202ENSMUST00000022474 Kif21aQ9QXL2 1672 aa8.33□□□□□ -1.08
Pbrm1-202ENSMUST00000022474 Hnrnpul2Q00PI9 745 aaKnown RBP8.32□□□□□ -1.08
Pbrm1-202ENSMUST00000022474 Pbrm1Q8BSQ9 1634 aaKnown RBP8.32□□□□□ -1.08
Pbrm1-202ENSMUST00000022474 CftrP26361 1476 aa8.31□□□□□ -1.08
Pbrm1-202ENSMUST00000022474 Pknox2Q8BG99 474 aa8.31□□□□□ -1.08
Pbrm1-202ENSMUST00000022474 Ift140E9PY46 1464 aa8.31□□□□□ -1.08
Pbrm1-202ENSMUST00000022474 Lamc3Q9R0B6 1581 aa8.31□□□□□ -1.08
Pbrm1-202ENSMUST00000022474 Cux2P70298 1426 aa8.31□□□□□ -1.08
Pbrm1-202ENSMUST00000022474 Eid3Q3V124 375 aa8.29□□□□□ -1.08
Pbrm1-202ENSMUST00000022474 ArxO35085 564 aa8.29□□□□□ -1.08
Pbrm1-202ENSMUST00000022474 Upf2A2AT37 1269 aaKnown RBP8.28□□□□□ -1.08
Pbrm1-202ENSMUST00000022474 Rusc2Q80U22 1514 aa8.28□□□□□ -1.08
Pbrm1-202ENSMUST00000022474 Lmod3E9QA62 571 aa8.28□□□□□ -1.08
Pbrm1-202ENSMUST00000022474 Gtf3c3Q3TMP1 882 aa8.26□□□□□ -1.09
Pbrm1-202ENSMUST00000022474 CanxP35564 591 aaKnown RBP8.25□□□□□ -1.09
Pbrm1-202ENSMUST00000022474 Hdac5Q9Z2V6 1113 aa8.24□□□□□ -1.09
Pbrm1-202ENSMUST00000022474 Plekhg3Q4VAC9 1341 aa8.24□□□□□ -1.09
Pbrm1-202ENSMUST00000022474 Trim44Q9QXA7 346 aa8.24□□□□□ -1.09
Pbrm1-202ENSMUST00000022474 Ccdc18Q640L5 1455 aa8.22□□□□□ -1.09
Pbrm1-202ENSMUST00000022474 AU015836B2RUM3 263 aa8.22□□□□□ -1.09
Pbrm1-202ENSMUST00000022474 Npm1Q61937 292 aaKnown RBP8.22□□□□□ -1.09
Pbrm1-202ENSMUST00000022474 Plb1Q3TTY0 1478 aa8.22□□□□□ -1.09
Pbrm1-202ENSMUST00000022474 Kif15Q6P9L6 1387 aa8.21□□□□□ -1.09
Pbrm1-202ENSMUST00000022474 Adgrl3Q80TS3 1537 aa8.2□□□□□ -1.1
Pbrm1-202ENSMUST00000022474 Mrs2Q5NCE8 434 aa8.19□□□□□ -1.1
Pbrm1-202ENSMUST00000022474 Supt16hQ920B9 1047 aa8.19□□□□□ -1.1
Pbrm1-202ENSMUST00000022474 Crocc2F6XLV1 1638 aa8.19□□□□□ -1.1
Pbrm1-202ENSMUST00000022474 CatipB9EKE5 520 aa8.19□□□□□ -1.1
Pbrm1-202ENSMUST00000022474 Taok2Q6ZQ29 1240 aa8.18□□□□□ -1.1
Pbrm1-202ENSMUST00000022474 Synj1Q8CHC4 1574 aa8.18□□□□□ -1.1
Pbrm1-202ENSMUST00000022474 Urb2E9Q7L1 1524 aaKnown RBP8.18□□□□□ -1.1
Pbrm1-202ENSMUST00000022474 Cc2d2bA0A286YDU8 1405 aa8.17□□□□□ -1.1
Pbrm1-202ENSMUST00000022474 Gpatch8A2A6A1 1505 aa8.16□□□□□ -1.1
Pbrm1-202ENSMUST00000022474 Tnnt2P50752 301 aa8.15□□□□□ -1.1
Pbrm1-202ENSMUST00000022474 Ifnlr1Q8CGK5 535 aa8.15□□□□□ -1.1
Pbrm1-202ENSMUST00000022474 Zbtb7cQ8VCZ7 619 aa8.15□□□□□ -1.1
Pbrm1-202ENSMUST00000022474 Htatsf1Q8BGC0 757 aa8.15□□□□□ -1.1
Pbrm1-202ENSMUST00000022474 P3h3Q8CG70 732 aa8.13□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 DekQ7TNV0 380 aaKnown RBP8.13□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 Golga3P55937 1487 aa8.12□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 Il27Q8K3I6 234 aa8.12□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 Arhgef11Q68FM7 1552 aa8.12□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 PtprkP35822 1457 aa8.12□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 Hsp90ab1P11499 724 aaKnown RBP8.11□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 TnnQ80Z71 1560 aa8.11□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 Dhx29Q6PGC1 1365 aaKnown RBP8.11□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 Ppm1gQ61074 542 aa8.1□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 Ipo9Q91YE6 1041 aa8.1□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 Plcd4Q8K3R3 807 aa8.1□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 Trim30dE9PWL0 497 aa8.09□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 Vsig10D3YX43 558 aa8.09□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 Os9Q8K2C7 672 aa8.09□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 Cep170Q6A065 1588 aa8.09□□□□□ -1.11
Pbrm1-202ENSMUST00000022474 Nolc1E9Q5C9 702 aaKnown RBP8.09□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 LrpprcQ6PB66 1392 aaKnown RBP8.09□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Dnttip2Q8R2M2 758 aaKnown RBP8.09□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 PtprtQ99M80 1454 aa8.08□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Chic1Q8CBW7 227 aa8.08□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Ccer2J3QPU5 274 aa8.08□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Tcerg1Q8CGF7 1100 aaKnown RBP8.08□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Lmod2Q3UHZ5 550 aa8.07□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Clip1Q922J3 1391 aa8.07□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Rad21Q61550 635 aaKnown RBP8.06□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Polr3glQ8R0C0 218 aa8.06□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Ofd1Q80Z25 1017 aa8.06□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Slc4a3P16283 1227 aa8.06□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Fgd6Q69ZL1 1399 aa8.06□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Spryd3E9Q9B3 442 aa8.05□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Rtn4Q99P72 1162 aaKnown RBP8.05□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Plcb2A3KGF7 1181 aa8.04□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 PogzQ8BZH4 1409 aaKnown RBP8.04□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 PtmaP26350 111 aa8.04□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 AqrQ8CFQ3 1481 aaKnown RBP8.04□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Gapvd1Q6PAR5 1458 aa8.04□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Nup160Q9Z0W3 1402 aaKnown RBP8.03□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Nlrp6Q91WS2 869 aa8.03□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Zbtb4Q5F293 982 aa8.03□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 EprsQ8CGC7 1512 aaKnown RBP8.03□□□□□ -1.12
Pbrm1-202ENSMUST00000022474 Camsap1A2AHC3 1581 aa8.02□□□□□ -1.13
Pbrm1-202ENSMUST00000022474 Rrp12Q6P5B0 1295 aaKnown RBP8.02□□□□□ -1.13
Pbrm1-202ENSMUST00000022474 Neo1P97798 1493 aa8.02□□□□□ -1.13
Pbrm1-202ENSMUST00000022474 CadpsQ80TJ1 1355 aa8.01□□□□□ -1.13
Pbrm1-202ENSMUST00000022474 AdgbG3UZ78 1657 aa8□□□□□ -1.13
Pbrm1-202ENSMUST00000022474 Dnai1Q8C0M8 701 aa8□□□□□ -1.13
Pbrm1-202ENSMUST00000022474 Pdcl3Q8BVF2 240 aa7.99□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 311.3 ms