RNA–Protein interactions for RNA: ENSMUST00000020163.6

Nedd1-201, Transcript of Protein NEDD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nedd1, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1-201ENSMUST00000020163 Wdr62Q3U3T8 1523 aa14.03□□□□□ -0.16
Nedd1-201ENSMUST00000020163 Eid3Q3V124 375 aa14.02□□□□□ -0.16
Nedd1-201ENSMUST00000020163 Calr4Q3TQS0 420 aa14.02□□□□□ -0.17
Nedd1-201ENSMUST00000020163 Arap1Q4LDD4 1452 aa14.01□□□□□ -0.17
Nedd1-201ENSMUST00000020163 Phldb1Q6PDH0 1371 aaKnown RBP14.01□□□□□ -0.17
Nedd1-201ENSMUST00000020163 Npm2Q80W85 207 aa14.01□□□□□ -0.17
Nedd1-201ENSMUST00000020163 Frmpd1A2AKB4 1549 aa14□□□□□ -0.17
Nedd1-201ENSMUST00000020163 Arhgef5E9Q7D5 1581 aa14□□□□□ -0.17
Nedd1-201ENSMUST00000020163 UacaQ8CGB3 1411 aa13.99□□□□□ -0.17
Nedd1-201ENSMUST00000020163 Eea1Q8BL66 1411 aa13.98□□□□□ -0.17
Nedd1-201ENSMUST00000020163 Arhgap35Q91YM2 1499 aa13.97□□□□□ -0.17
Nedd1-201ENSMUST00000020163 Supt16hQ920B9 1047 aa13.97□□□□□ -0.17
Nedd1-201ENSMUST00000020163 Washc2Q6PGL7 1334 aa13.93□□□□□ -0.18
Nedd1-201ENSMUST00000020163 Gm13697A2AK42 830 aa13.91□□□□□ -0.18
Nedd1-201ENSMUST00000020163 Tiam1Q60610 1591 aa13.91□□□□□ -0.18
Nedd1-201ENSMUST00000020163 NrkQ9R0G8 1455 aa13.9□□□□□ -0.18
Nedd1-201ENSMUST00000020163 TnnQ80Z71 1560 aa13.89□□□□□ -0.19
Nedd1-201ENSMUST00000020163 Camsap2Q8C1B1 1461 aa13.87□□□□□ -0.19
Nedd1-201ENSMUST00000020163 NclP09405 707 aaKnown RBP13.87□□□□□ -0.19
Nedd1-201ENSMUST00000020163 Ubl4bQ9CQ84 188 aa13.86□□□□□ -0.19
Nedd1-201ENSMUST00000020163 Ankrd36D3Z4K0 1415 aa13.86□□□□□ -0.19
Nedd1-201ENSMUST00000020163 Smg6P61406 1418 aaKnown RBP13.84□□□□□ -0.19
Nedd1-201ENSMUST00000020163 Setd5Q5XJV7 1441 aa13.83□□□□□ -0.2
Nedd1-201ENSMUST00000020163 Map3k1P53349 1493 aa13.83□□□□□ -0.2
Nedd1-201ENSMUST00000020163 Wdr43Q6ZQL4 677 aaKnown RBP13.82□□□□□ -0.2
Nedd1-201ENSMUST00000020163 Ncoa2Q61026 1462 aa13.81□□□□□ -0.2
Nedd1-201ENSMUST00000020163 Erich3F6QRE9 1637 aa13.81□□□□□ -0.2
Nedd1-201ENSMUST00000020163 Naip1Q9QWK5 1403 aa13.8□□□□□ -0.2
Nedd1-201ENSMUST00000020163 PtprkP35822 1457 aa13.79□□□□□ -0.2
Nedd1-201ENSMUST00000020163 Ppp4r2Q0VGB7 417 aa13.78□□□□□ -0.2
Nedd1-201ENSMUST00000020163 Ccer2J3QPU5 274 aa13.77□□□□□ -0.21
Nedd1-201ENSMUST00000020163 Hdac5Q9Z2V6 1113 aa13.76□□□□□ -0.21
Nedd1-201ENSMUST00000020163 Mrc2Q64449 1479 aa13.76□□□□□ -0.21
Nedd1-201ENSMUST00000020163 Fhad1A6PWD2 1420 aa13.76□□□□□ -0.21
Nedd1-201ENSMUST00000020163 Upf2A2AT37 1269 aaKnown RBP13.73□□□□□ -0.21
Nedd1-201ENSMUST00000020163 Liat1Q810M6 228 aa13.73□□□□□ -0.21
Nedd1-201ENSMUST00000020163 Ccdc27Q3V036 639 aa13.73□□□□□ -0.21
Nedd1-201ENSMUST00000020163 Dhx29Q6PGC1 1365 aaKnown RBP13.72□□□□□ -0.21
Nedd1-201ENSMUST00000020163 BlmO88700 1416 aa13.72□□□□□ -0.21
Nedd1-201ENSMUST00000020163 Shroom4Q1W617 1475 aa13.72□□□□□ -0.21
Nedd1-201ENSMUST00000020163 AqrQ8CFQ3 1481 aaKnown RBP13.72□□□□□ -0.21
Nedd1-201ENSMUST00000020163 Slx4Q6P1D7 1565 aa13.72□□□□□ -0.21
Nedd1-201ENSMUST00000020163 Unc13aQ4KUS2 1712 aa13.71□□□□□ -0.21
Nedd1-201ENSMUST00000020163 Mia2Q91ZV0 1396 aa13.71□□□□□ -0.21
Nedd1-201ENSMUST00000020163 Hspa5P20029 655 aaKnown RBP13.71□□□□□ -0.21
Nedd1-201ENSMUST00000020163 Ccdc9Q8VC31 543 aaKnown RBP13.71□□□□□ -0.21
Nedd1-201ENSMUST00000020163 Ankrd26Q811D2 1581 aa13.7□□□□□ -0.22
Nedd1-201ENSMUST00000020163 Vps8Q0P5W1 1427 aa13.7□□□□□ -0.22
Nedd1-201ENSMUST00000020163 Amer1Q7TS75 1132 aa13.7□□□□□ -0.22
Nedd1-201ENSMUST00000020163 Pak3Q61036 559 aa13.7□□□□□ -0.22
Nedd1-201ENSMUST00000020163 Egfem1Q8C088 590 aa13.69□□□□□ -0.22
Nedd1-201ENSMUST00000020163 Pcf11G3X9Z4 1553 aa13.68□□□□□ -0.22
Nedd1-201ENSMUST00000020163 Crocc2F6XLV1 1638 aa13.68□□□□□ -0.22
Nedd1-201ENSMUST00000020163 3425401B19RikD3Z1D3 1412 aa13.67□□□□□ -0.22
Nedd1-201ENSMUST00000020163 Naip5Q9R016 1403 aa13.67□□□□□ -0.22
Nedd1-201ENSMUST00000020163 Pprc1Q6NZN1 1644 aa13.66□□□□□ -0.22
Nedd1-201ENSMUST00000020163 Cul7Q8VE73 1689 aa13.66□□□□□ -0.22
Nedd1-201ENSMUST00000020163 Fam50aQ9WV03 339 aaKnown RBP13.65□□□□□ -0.22
Nedd1-201ENSMUST00000020163 Lmo7E9PYF4 1699 aaKnown RBP13.65□□□□□ -0.22
Nedd1-201ENSMUST00000020163 Efcab5A0JP43 1406 aa13.65□□□□□ -0.22
Nedd1-201ENSMUST00000020163 Fyco1Q8VDC1 1437 aa13.65□□□□□ -0.22
Nedd1-201ENSMUST00000020163 Camsap1A2AHC3 1581 aa13.63□□□□□ -0.23
Nedd1-201ENSMUST00000020163 Peg3Q3URU2 1571 aa13.62□□□□□ -0.23
Nedd1-201ENSMUST00000020163 Mroh2bQ7M6Y6 1581 aa13.62□□□□□ -0.23
Nedd1-201ENSMUST00000020163 Slc24a1Q91WD8 1130 aa13.61□□□□□ -0.23
Nedd1-201ENSMUST00000020163 Sin3aQ60520 1274 aaKnown RBP13.61□□□□□ -0.23
Nedd1-201ENSMUST00000020163 Ipo9Q91YE6 1041 aa13.6□□□□□ -0.23
Nedd1-201ENSMUST00000020163 CntlnA2AM05 1397 aa13.6□□□□□ -0.23
Nedd1-201ENSMUST00000020163 Naip2Q9QUK4 1447 aa13.6□□□□□ -0.23
Nedd1-201ENSMUST00000020163 Lamc3Q9R0B6 1581 aa13.6□□□□□ -0.23
Nedd1-201ENSMUST00000020163 Gtf3c3Q3TMP1 882 aa13.59□□□□□ -0.23
Nedd1-201ENSMUST00000020163 Eif5bQ05D44 1216 aaKnown RBP13.58□□□□□ -0.24
Nedd1-201ENSMUST00000020163 Fhod3Q76LL6 1578 aa13.58□□□□□ -0.24
Nedd1-201ENSMUST00000020163 Slc4a2P13808 1237 aaKnown RBP13.56□□□□□ -0.24
Nedd1-201ENSMUST00000020163 Gm13695A2AK44 830 aa13.55□□□□□ -0.24
Nedd1-201ENSMUST00000020163 Ncoa1P70365 1447 aa13.54□□□□□ -0.24
Nedd1-201ENSMUST00000020163 Mrs2Q5NCE8 434 aa13.54□□□□□ -0.24
Nedd1-201ENSMUST00000020163 Irx3P81067 507 aa13.53□□□□□ -0.24
Nedd1-201ENSMUST00000020163 Hsp90aa1P07901 733 aaKnown RBP13.53□□□□□ -0.24
Nedd1-201ENSMUST00000020163 Fgd1P52734 960 aa13.53□□□□□ -0.24
Nedd1-201ENSMUST00000020163 Ttbk1Q6PCN3 1308 aa13.53□□□□□ -0.24
Nedd1-201ENSMUST00000020163 Dennd4bQ3U1Y4 1499 aa13.52□□□□□ -0.25
Nedd1-201ENSMUST00000020163 Cux2P70298 1426 aa13.51□□□□□ -0.25
Nedd1-201ENSMUST00000020163 Il27Q8K3I6 234 aa13.51□□□□□ -0.25
Nedd1-201ENSMUST00000020163 Kif15Q6P9L6 1387 aa13.5□□□□□ -0.25
Nedd1-201ENSMUST00000020163 Cux1P53564 1515 aa13.5□□□□□ -0.25
Nedd1-201ENSMUST00000020163 Tcerg1Q8CGF7 1100 aaKnown RBP13.5□□□□□ -0.25
Nedd1-201ENSMUST00000020163 Grin2bQ01097 1482 aa13.5□□□□□ -0.25
Nedd1-201ENSMUST00000020163 Gm7298A0A0N4SVU1 1476 aa13.48□□□□□ -0.25
Nedd1-201ENSMUST00000020163 PnisrA2AJT4 805 aaKnown RBP13.48□□□□□ -0.25
Nedd1-201ENSMUST00000020163 P3h3Q8CG70 732 aa13.48□□□□□ -0.25
Nedd1-201ENSMUST00000020163 EprsQ8CGC7 1512 aaKnown RBP13.48□□□□□ -0.25
Nedd1-201ENSMUST00000020163 NrdcQ8BHG1 1161 aa13.47□□□□□ -0.25
Nedd1-201ENSMUST00000020163 Setbp1Q9Z180 1582 aa13.47□□□□□ -0.25
Nedd1-201ENSMUST00000020163 A2mQ6GQT1 1474 aa13.46□□□□□ -0.25
Nedd1-201ENSMUST00000020163 Lmod2Q3UHZ5 550 aa13.44□□□□□ -0.26
Nedd1-201ENSMUST00000020163 Exoc6Q8R313 802 aa13.44□□□□□ -0.26
Nedd1-201ENSMUST00000020163 Disp1Q3TDN0 1521 aa13.44□□□□□ -0.26
Nedd1-201ENSMUST00000020163 Gm1043A0A140LJC2 1431 aa13.44□□□□□ -0.26
Nedd1-201ENSMUST00000020163 Wwc2Q6NXJ0 1187 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms