RNA–Protein interactions for RNA: ENSMUST00000006053.12

Smpd4-201, Transcript of Sphingomyelin phosphodiesterase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smpd4, Length 4,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd4-201ENSMUST00000006053 Mtus2Q3UHD3 1353 aa11.72□□□□□ -0.53
Smpd4-201ENSMUST00000006053 Dhx29Q6PGC1 1365 aaKnown RBP11.72□□□□□ -0.53
Smpd4-201ENSMUST00000006053 Smarca4Q3TKT4 1613 aaKnown RBP11.72□□□□□ -0.53
Smpd4-201ENSMUST00000006053 Fmn1Q05860 1466 aa11.71□□□□□ -0.53
Smpd4-201ENSMUST00000006053 ScribQ80U72 1612 aa11.71□□□□□ -0.53
Smpd4-201ENSMUST00000006053 Cecr2E9Q2Z1 1453 aa11.71□□□□□ -0.53
Smpd4-201ENSMUST00000006053 CftrP26361 1476 aa11.7□□□□□ -0.54
Smpd4-201ENSMUST00000006053 Mier1Q5UAK0 511 aa11.69□□□□□ -0.54
Smpd4-201ENSMUST00000006053 Rpap1Q80TE0 1409 aa11.68□□□□□ -0.54
Smpd4-201ENSMUST00000006053 Arid4bA2CG63 1314 aaKnown RBP11.68□□□□□ -0.54
Smpd4-201ENSMUST00000006053 Srpk2O54781 681 aaKnown RBP11.67□□□□□ -0.54
Smpd4-201ENSMUST00000006053 Dhx57Q6P5D3 1388 aaKnown RBP11.66□□□□□ -0.54
Smpd4-201ENSMUST00000006053 Mroh3A0A1D5RM54 893 aa11.66□□□□□ -0.54
Smpd4-201ENSMUST00000006053 Soga1E1U8D0 1418 aa11.65□□□□□ -0.54
Smpd4-201ENSMUST00000006053 Baz1bQ9Z277 1479 aa11.65□□□□□ -0.54
Smpd4-201ENSMUST00000006053 HdgfP51859 237 aaKnown RBP11.64□□□□□ -0.55
Smpd4-201ENSMUST00000006053 Zfp777B9EKF4 885 aa11.64□□□□□ -0.55
Smpd4-201ENSMUST00000006053 Eid3Q3V124 375 aa11.61□□□□□ -0.55
Smpd4-201ENSMUST00000006053 Stk24Q99KH8 431 aa11.61□□□□□ -0.55
Smpd4-201ENSMUST00000006053 Mrc2Q64449 1479 aa11.6□□□□□ -0.55
Smpd4-201ENSMUST00000006053 Aebp1Q640N1 1128 aa11.59□□□□□ -0.55
Smpd4-201ENSMUST00000006053 Gm20521D3Z5F7 333 aa11.59□□□□□ -0.55
Smpd4-201ENSMUST00000006053 Iqgap2Q3UQ44 1575 aa11.59□□□□□ -0.55
Smpd4-201ENSMUST00000006053 Kdm2aP59997 1161 aa11.58□□□□□ -0.56
Smpd4-201ENSMUST00000006053 Exosc9Q9JHI7 438 aaKnown RBP11.58□□□□□ -0.56
Smpd4-201ENSMUST00000006053 Txndc2Q6P902 515 aa11.57□□□□□ -0.56
Smpd4-201ENSMUST00000006053 Smarca2Q6DIC0 1577 aa11.57□□□□□ -0.56
Smpd4-201ENSMUST00000006053 Jph4Q80WT0 628 aa11.56□□□□□ -0.56
Smpd4-201ENSMUST00000006053 Carmil1Q6EDY6 1374 aa11.56□□□□□ -0.56
Smpd4-201ENSMUST00000006053 Psme1P97371 249 aa11.56□□□□□ -0.56
Smpd4-201ENSMUST00000006053 Rgl3Q3UYI5 709 aa11.55□□□□□ -0.56
Smpd4-201ENSMUST00000006053 NgefQ8CHT1 710 aa11.54□□□□□ -0.56
Smpd4-201ENSMUST00000006053 Urb2E9Q7L1 1524 aaKnown RBP11.53□□□□□ -0.56
Smpd4-201ENSMUST00000006053 Cyb5rlB1AS42 316 aa11.52□□□□□ -0.56
Smpd4-201ENSMUST00000006053 Eif5bQ05D44 1216 aaKnown RBP11.52□□□□□ -0.57
Smpd4-201ENSMUST00000006053 Fgd6Q69ZL1 1399 aa11.51□□□□□ -0.57
Smpd4-201ENSMUST00000006053 Kif3bQ61771 747 aa11.51□□□□□ -0.57
Smpd4-201ENSMUST00000006053 Map4P27546 1125 aaKnown RBP11.5□□□□□ -0.57
Smpd4-201ENSMUST00000006053 Stag3O70576 1240 aa11.5□□□□□ -0.57
Smpd4-201ENSMUST00000006053 Polr3glQ8R0C0 218 aa11.48□□□□□ -0.57
Smpd4-201ENSMUST00000006053 WrnO09053 1401 aa11.48□□□□□ -0.57
Smpd4-201ENSMUST00000006053 Ppargc1bQ8VHJ7 1014 aa11.47□□□□□ -0.57
Smpd4-201ENSMUST00000006053 Sart1Q9Z315 806 aaKnown RBP11.46□□□□□ -0.57
Smpd4-201ENSMUST00000006053 Bcl11bQ99PV8 884 aa11.45□□□□□ -0.58
Smpd4-201ENSMUST00000006053 Cttnbp2B9EJA2 1648 aa11.44□□□□□ -0.58
Smpd4-201ENSMUST00000006053 Mia2Q91ZV0 1396 aa11.44□□□□□ -0.58
Smpd4-201ENSMUST00000006053 CntlnA2AM05 1397 aa11.44□□□□□ -0.58
Smpd4-201ENSMUST00000006053 Grwd1Q810D6 446 aaKnown RBP11.44□□□□□ -0.58
Smpd4-201ENSMUST00000006053 Tnnt3Q9QZ47 272 aa11.44□□□□□ -0.58
Smpd4-201ENSMUST00000006053 Efcab5A0JP43 1406 aa11.43□□□□□ -0.58
Smpd4-201ENSMUST00000006053 CadpsQ80TJ1 1355 aa11.42□□□□□ -0.58
Smpd4-201ENSMUST00000006053 Synj1Q8CHC4 1574 aa11.41□□□□□ -0.58
Smpd4-201ENSMUST00000006053 Ccnb3Q810T2 1396 aa11.41□□□□□ -0.58
Smpd4-201ENSMUST00000006053 Iqcf3Q9D498 203 aa11.4□□□□□ -0.58
Smpd4-201ENSMUST00000006053 Fbln2P37889 1221 aa11.4□□□□□ -0.58
Smpd4-201ENSMUST00000006053 Cep162Q6ZQ06 1403 aa11.4□□□□□ -0.58
Smpd4-201ENSMUST00000006053 Cc2d2bA0A286YDU8 1405 aa11.39□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Aplp2Q06335 707 aa11.39□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Nop58Q6DFW4 536 aaKnown RBP11.39□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Ncoa2Q61026 1462 aa11.38□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Dnajc5bQ9CQ94 199 aa11.38□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Fyco1Q8VDC1 1437 aa11.38□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Shroom4Q1W617 1475 aa11.37□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Ift140E9PY46 1464 aa11.37□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Pip4k2bQ80XI4 416 aa11.36□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Eif4g2Q62448 906 aaKnown RBP11.36□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Ccdc88bQ4QRL3 1481 aa11.35□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Card11Q8CIS0 1159 aa11.35□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Stk26Q99JT2 416 aa11.35□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Ecm2Q5FW85 670 aa11.34□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Cabp1Q9JLK7 227 aa11.34□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Cwc22Q8C5N3 908 aaKnown RBP11.34□□□□□ -0.59
Smpd4-201ENSMUST00000006053 Gm14025A2AP89 1413 aa11.33□□□□□ -0.6
Smpd4-201ENSMUST00000006053 Ap3b2Q9JME5 1082 aa11.33□□□□□ -0.6
Smpd4-201ENSMUST00000006053 Frmpd1A2AKB4 1549 aa11.32□□□□□ -0.6
Smpd4-201ENSMUST00000006053 Irx6Q9ER75 438 aa11.32□□□□□ -0.6
Smpd4-201ENSMUST00000006053 Fgd1P52734 960 aa11.31□□□□□ -0.6
Smpd4-201ENSMUST00000006053 Gtf2e1Q9D0D5 440 aa11.3□□□□□ -0.6
Smpd4-201ENSMUST00000006053 Sox12Q04890 314 aa11.3□□□□□ -0.6
Smpd4-201ENSMUST00000006053 CenpbP27790 599 aa11.3□□□□□ -0.6
Smpd4-201ENSMUST00000006053 ClspnQ80YR7 1315 aa11.29□□□□□ -0.6
Smpd4-201ENSMUST00000006053 Mapk8ip3Q9ESN9 1337 aa11.29□□□□□ -0.6
Smpd4-201ENSMUST00000006053 Trak1Q6PD31 939 aa11.29□□□□□ -0.6
Smpd4-201ENSMUST00000006053 Cc2d2aQ8CFW7 1633 aa11.28□□□□□ -0.6
Smpd4-201ENSMUST00000006053 Duox2A2AQ99 1517 aa11.28□□□□□ -0.6
Smpd4-201ENSMUST00000006053 Utp14aQ640M1 767 aaKnown RBP11.28□□□□□ -0.6
Smpd4-201ENSMUST00000006053 Plekhh2Q8C115 1491 aa11.28□□□□□ -0.6
Smpd4-201ENSMUST00000006053 Spag9Q58A65 1321 aaKnown RBP11.27□□□□□ -0.6
Smpd4-201ENSMUST00000006053 Nup155Q99P88 1391 aaKnown RBP11.27□□□□□ -0.6
Smpd4-201ENSMUST00000006053 Upf2A2AT37 1269 aaKnown RBP11.27□□□□□ -0.61
Smpd4-201ENSMUST00000006053 Atf3Q60765 181 aa11.27□□□□□ -0.61
Smpd4-201ENSMUST00000006053 Igf1rQ60751 1373 aa11.27□□□□□ -0.61
Smpd4-201ENSMUST00000006053 Ppm1fQ8CGA0 452 aa11.26□□□□□ -0.61
Smpd4-201ENSMUST00000006053 PogzQ8BZH4 1409 aaKnown RBP11.26□□□□□ -0.61
Smpd4-201ENSMUST00000006053 Q8BT18 775 aa11.26□□□□□ -0.61
Smpd4-201ENSMUST00000006053 Stard8Q8K031 1019 aa11.26□□□□□ -0.61
Smpd4-201ENSMUST00000006053 Pkd2O35245 966 aa11.25□□□□□ -0.61
Smpd4-201ENSMUST00000006053 Rangap1P46061 589 aaKnown RBP11.25□□□□□ -0.61
Smpd4-201ENSMUST00000006053 Plb1Q3TTY0 1478 aa11.25□□□□□ -0.61
Smpd4-201ENSMUST00000006053 Prdm16A2A935 1275 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 97.1 ms