RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	PRB2	P02812	416 aa	Predicted RBP	0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	NMB	P08949	121 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	GNGT1	P63211	74 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	DEFB103A	P81534	67 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	KRTAP1-1	Q07627	177 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	C6orf201	Q7Z4U5	140 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	C5orf56	Q8N8D9	126 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	SPACA4	Q8TDM5	124 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	CCL19	Q99731	98 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	MGAM	O43451	1857 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	MALRD1	Q5VYJ5	2156 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	RAPGEF6	Q8TEU7	1601 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	ZNF407	Q9C0G0	2248 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	SCN8A	Q9UQD0	1980 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	TOPAZ1	Q8N9V7	1692 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	CCDC88C	Q9P219	2028 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	PHLPP1	O60346	1717 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	BCORL1	Q5H9F3	1711 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	SHANK3	Q9BYB0	1731 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	ANKRD26	Q9UPS8	1709 aa		0.81	□□□□□ -2.28
MECP2-222	ENST00000637533	POLA1	P09884	1462 aa	Predicted RBP	0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	ERVK-7	P63135	1459 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	COL11A1	P12107	1806 aa	Predicted RBP	0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	MYO9B	Q13459	2157 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	URB2	Q14146	1524 aa	Known RBP	0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	DUOX2	Q9NRD8	1548 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	MYO5A	Q9Y4I1	1855 aa	Known RBP	0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	HELZ	P42694	1942 aa	Known RBP	0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	CFAP74	Q9C0B2	1584 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	AKAP11	Q9UKA4	1901 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	BRWD1	Q9NSI6	2320 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533		A0A087WWC5	75 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	MRPL33	O75394	65 aa	Known RBP	0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	ARMS2	P0C7Q2	107 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	SERF2	P84101	59 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	DEFA5	Q01523	94 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	NMS	Q5H8A3	153 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	CFAP126	Q5VTH2	177 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	C18orf32	Q8TCD1	76 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	PLAC4	Q8WY50	150 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	USMG5	Q96IX5	58 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	UBE2D4	Q9Y2X8	147 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	CROCC	Q5TZA2	2017 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	LRRC37A2	A6NM11	1700 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	SUPT6H	Q7KZ85	1726 aa	Known RBP	0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	PLXNB1	O43157	2135 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	STRC	Q7RTU9	1775 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	PRRC2A	P48634	2157 aa	Known RBP	0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	RTTN	Q86VV8	2226 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	ANKRD50	Q9ULJ7	1429 aa		0.8	□□□□□ -2.28
MECP2-222	ENST00000637533	MYH1	P12882	1939 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	ATG2A	Q2TAZ0	1938 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	MYH13	Q9UKX3	1938 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	LRP5	O75197	1615 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	KIAA2026	Q5HYC2	2103 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	MED12L	Q86YW9	2145 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	KDM5A	P29375	1690 aa	Known RBP	0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	MYOM1	P52179	1685 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	ALPK2	Q86TB3	2170 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	WDR90	Q96KV7	1748 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533		A0A087WXM4	84 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533		A0A096LNT2	108 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	C7orf77	A4D0Y5	90 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	IGLC2	P0DOY2	106 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	IGLC3	P0DOY3	106 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	IFI27	P40305	119 aa	Predicted RBP	0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	KRTAP12-2	P59991	146 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	SPINK9	Q5DT21	86 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	DEFB121	Q5J5C9	76 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	OBSCN-AS1	Q96MR7	158 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	KRTAP4-11	Q9BYQ6	195 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	KRTAP4-9	Q9BYQ8	210 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	KRTAP4-2	Q9BYR5	136 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	KRTAP2-2	Q9BYT5	123 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	FOCAD	Q5VW36	1801 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	SBF2	Q86WG5	1849 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	KIF13A	Q9H1H9	1805 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	CPAMD8	Q8IZJ3	1885 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	SETBP1	Q9Y6X0	1596 aa		0.79	□□□□□ -2.28
MECP2-222	ENST00000637533	KIF14	Q15058	1648 aa		0.78	□□□□□ -2.28
MECP2-222	ENST00000637533	NCKAP5	O14513	1909 aa		0.78	□□□□□ -2.28
MECP2-222	ENST00000637533	TANC2	Q9HCD6	1990 aa		0.78	□□□□□ -2.28
MECP2-222	ENST00000637533	HEATR5B	Q9P2D3	2071 aa		0.78	□□□□□ -2.28
MECP2-222	ENST00000637533	NBDY	A0A0U1RRE5	68 aa		0.78	□□□□□ -2.28
MECP2-222	ENST00000637533		H0Y9P7	68 aa		0.78	□□□□□ -2.28
MECP2-222	ENST00000637533	COX8A	P10176	69 aa		0.78	□□□□□ -2.28
MECP2-222	ENST00000637533	PIGY	Q3MUY2	71 aa		0.78	□□□□□ -2.28
MECP2-222	ENST00000637533	BVES-AS1	Q5T3Y7	98 aa		0.78	□□□□□ -2.28
MECP2-222	ENST00000637533		Q6JHZ5	121 aa		0.78	□□□□□ -2.28
MECP2-222	ENST00000637533		Q6ZRN7	208 aa	Predicted RBP	0.78	□□□□□ -2.28
MECP2-222	ENST00000637533	UBE2DNL	Q8IWF7	75 aa		0.78	□□□□□ -2.28
MECP2-222	ENST00000637533	FAM223A	Q8IWN6	122 aa		0.78	□□□□□ -2.28
MECP2-222	ENST00000637533	ZCCHC13	Q8WW36	166 aa	Known RBP	0.78	□□□□□ -2.28
MECP2-222	ENST00000637533	C20orf78	Q9BR46	151 aa		0.78	□□□□□ -2.28
MECP2-222	ENST00000637533	MUC4	Q99102	2169 aa		0.78	□□□□□ -2.28
MECP2-222	ENST00000637533	MRC1	P22897	1456 aa		0.78	□□□□□ -2.28
MECP2-222	ENST00000637533	MYO3A	Q8NEV4	1616 aa		0.78	□□□□□ -2.29
MECP2-222	ENST00000637533	ADAMTS7	Q9UKP4	1686 aa		0.78	□□□□□ -2.29
MECP2-222	ENST00000637533	PRDM2	Q13029	1718 aa		0.78	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms