RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 RNF185Q96GF1 192 aa8.58□□□□□ -1.04
CLN6-217ENST00000636964 CARD19Q96LW7 228 aa8.58□□□□□ -1.04
CLN6-217ENST00000636964 JPT2Q9H910 190 aa8.58□□□□□ -1.04
CLN6-217ENST00000636964 TRBV7-3A0A075B6L6 115 aa8.58□□□□□ -1.04
CLN6-217ENST00000636964 RNASE4P34096 147 aaKnown RBP8.58□□□□□ -1.04
CLN6-217ENST00000636964 LINC01559Q495D7 138 aa8.58□□□□□ -1.04
CLN6-217ENST00000636964 ZFAND2AQ8N6M9 145 aa8.58□□□□□ -1.04
CLN6-217ENST00000636964 ANK3Q12955 4377 aaKnown RBP8.57□□□□□ -1.04
CLN6-217ENST00000636964 LINC01546A6NGU7 62 aa8.57□□□□□ -1.04
CLN6-217ENST00000636964 IGKCP01834 107 aa8.57□□□□□ -1.04
CLN6-217ENST00000636964 GATA1P15976 413 aaPredicted RBP8.57□□□□□ -1.04
CLN6-217ENST00000636964 CFAP126Q5VTH2 177 aa8.57□□□□□ -1.04
CLN6-217ENST00000636964 OTOGQ6ZRI0 2925 aa8.57□□□□□ -1.04
CLN6-217ENST00000636964 LINC01619G3V211 115 aa8.57□□□□□ -1.04
CLN6-217ENST00000636964 LGALS9O00182 355 aa8.57□□□□□ -1.04
CLN6-217ENST00000636964 LEPP41159 167 aa8.57□□□□□ -1.04
CLN6-217ENST00000636964 SRSF9Q13242 221 aaKnown RBP eCLIP8.57□□□□□ -1.04
CLN6-217ENST00000636964 TAL2Q16559 108 aa8.57□□□□□ -1.04
CLN6-217ENST00000636964 CRLF1O75462 422 aa8.57□□□□□ -1.04
CLN6-217ENST00000636964 SFTA2Q6UW10 78 aa8.57□□□□□ -1.04
CLN6-217ENST00000636964 DLX4Q92988 240 aaPredicted RBP8.57□□□□□ -1.04
CLN6-217ENST00000636964 CD28P10747 220 aa8.56□□□□□ -1.04
CLN6-217ENST00000636964 CKS2P33552 79 aa8.56□□□□□ -1.04
CLN6-217ENST00000636964 Q6Q795 121 aa8.56□□□□□ -1.04
CLN6-217ENST00000636964 C4orf3Q8WVX3 66 aa8.56□□□□□ -1.04
CLN6-217ENST00000636964 LY6G6DO95868 133 aa8.55□□□□□ -1.04
CLN6-217ENST00000636964 LINC00336Q6ZUF6 198 aa8.55□□□□□ -1.04
CLN6-217ENST00000636964 MRPL35Q9NZE8 188 aaKnown RBP8.55□□□□□ -1.04
CLN6-217ENST00000636964 K7EQG2 157 aa8.55□□□□□ -1.04
CLN6-217ENST00000636964 LINC01006Q8NI28 216 aa8.55□□□□□ -1.04
CLN6-217ENST00000636964 A0A0U1RQV1 116 aa8.54□□□□□ -1.04
CLN6-217ENST00000636964 H3BVH4 76 aa8.54□□□□□ -1.04
CLN6-217ENST00000636964 PRSS1P07477 247 aa8.54□□□□□ -1.04
CLN6-217ENST00000636964 SNRPD3P62318 126 aaKnown RBP8.54□□□□□ -1.04
CLN6-217ENST00000636964 LENEPQ9Y5L5 61 aa8.54□□□□□ -1.04
CLN6-217ENST00000636964 FCER1GP30273 86 aa8.54□□□□□ -1.04
CLN6-217ENST00000636964 ZFP2Q6ZN57 461 aa8.54□□□□□ -1.04
CLN6-217ENST00000636964 SETXQ7Z333 2677 aaKnown RBP8.54□□□□□ -1.04
CLN6-217ENST00000636964 IGLV2-18A0A075B6J9 118 aa8.54□□□□□ -1.04
CLN6-217ENST00000636964 GNRH2O43555 120 aa8.54□□□□□ -1.04
CLN6-217ENST00000636964 TMEM158Q8WZ71 300 aa8.54□□□□□ -1.04
CLN6-217ENST00000636964 TRAV12-2A0A075B6T6 113 aa8.53□□□□□ -1.04
CLN6-217ENST00000636964 TRAV21A0A0B4J279 112 aa8.53□□□□□ -1.04
CLN6-217ENST00000636964 DPM2O94777 84 aa8.53□□□□□ -1.04
CLN6-217ENST00000636964 DUSP14O95147 198 aaKnown RBP8.53□□□□□ -1.04
CLN6-217ENST00000636964 HLA-DRB4P13762 266 aa8.53□□□□□ -1.04
CLN6-217ENST00000636964 GAGE2AQ6NT46 116 aa8.53□□□□□ -1.04
CLN6-217ENST00000636964 FAM19A4Q96LR4 140 aa8.53□□□□□ -1.04
CLN6-217ENST00000636964 HLA-DRB4X5D2U9 266 aa8.53□□□□□ -1.04
CLN6-217ENST00000636964 NACAE9PAV3 2078 aa8.53□□□□□ -1.04
CLN6-217ENST00000636964 RNASE1P07998 156 aaKnown RBP8.53□□□□□ -1.04
CLN6-217ENST00000636964 HIST1H4GQ99525 98 aa8.52□□□□□ -1.04
CLN6-217ENST00000636964 TRAV12-3A0A0B4J271 114 aa8.52□□□□□ -1.05
CLN6-217ENST00000636964 Q5XG85 94 aa8.52□□□□□ -1.05
CLN6-217ENST00000636964 TMEM61Q8N0U2 210 aa8.52□□□□□ -1.05
CLN6-217ENST00000636964 S100A4P26447 101 aaKnown RBP8.52□□□□□ -1.05
CLN6-217ENST00000636964 SPANXN1Q5VSR9 72 aa8.52□□□□□ -1.05
CLN6-217ENST00000636964 PEMTQ9UBM1 199 aa8.52□□□□□ -1.05
CLN6-217ENST00000636964 A0A0J9YX75 114 aa8.51□□□□□ -1.05
CLN6-217ENST00000636964 C3orf22Q8N5N4 141 aa8.51□□□□□ -1.05
CLN6-217ENST00000636964 SPANXCQ9NY87 97 aa8.51□□□□□ -1.05
CLN6-217ENST00000636964 KNCNA6PVL3 124 aa8.51□□□□□ -1.05
CLN6-217ENST00000636964 M0R381 172 aa8.51□□□□□ -1.05
CLN6-217ENST00000636964 DEFB131AP59861 70 aa8.51□□□□□ -1.05
CLN6-217ENST00000636964 HILS1P60008 231 aa8.51□□□□□ -1.05
CLN6-217ENST00000636964 SPINK13Q1W4C9 94 aa8.51□□□□□ -1.05
CLN6-217ENST00000636964 DYNLRB2Q8TF09 96 aa8.51□□□□□ -1.05
CLN6-217ENST00000636964 CNFNQ9BYD5 112 aa8.51□□□□□ -1.05
CLN6-217ENST00000636964 TEN1Q86WV5 123 aa8.51□□□□□ -1.05
CLN6-217ENST00000636964 C2orf48Q96LS8 159 aa8.51□□□□□ -1.05
CLN6-217ENST00000636964 INAFM1C9JVW0 142 aa8.5□□□□□ -1.05
CLN6-217ENST00000636964 CCL24O00175 119 aa8.5□□□□□ -1.05
CLN6-217ENST00000636964 ASIPP42127 132 aa8.5□□□□□ -1.05
CLN6-217ENST00000636964 STHQ8IWL8 128 aa8.5□□□□□ -1.05
CLN6-217ENST00000636964 ATRQ13535 2644 aa8.49□□□□□ -1.05
CLN6-217ENST00000636964 KLLNB2CW77 178 aa8.49□□□□□ -1.05
CLN6-217ENST00000636964 HIVEP1P15822 2718 aa8.49□□□□□ -1.05
CLN6-217ENST00000636964 TRAV26-2A0A0B4J265 109 aa8.49□□□□□ -1.05
CLN6-217ENST00000636964 A8MZ25 164 aa8.49□□□□□ -1.05
CLN6-217ENST00000636964 PMVKQ15126 192 aa8.49□□□□□ -1.05
CLN6-217ENST00000636964 DEFB114Q30KQ6 69 aa8.49□□□□□ -1.05
CLN6-217ENST00000636964 C15orf53Q8NAA6 179 aa8.49□□□□□ -1.05
CLN6-217ENST00000636964 LINC01549A6NIU2 74 aa8.48□□□□□ -1.05
CLN6-217ENST00000636964 APRG1Q8IVJ8 170 aa8.48□□□□□ -1.05
CLN6-217ENST00000636964 PHLDA3Q9Y5J5 127 aa8.48□□□□□ -1.05
CLN6-217ENST00000636964 NBEAL2Q6ZNJ1 2754 aa8.48□□□□□ -1.05
CLN6-217ENST00000636964 UQCRQO14949 82 aa8.48□□□□□ -1.05
CLN6-217ENST00000636964 PSMB2P49721 201 aa8.48□□□□□ -1.05
CLN6-217ENST00000636964 NSUN5P1Q3KNT7 163 aa8.48□□□□□ -1.05
CLN6-217ENST00000636964 C16orf95Q9H693 158 aa8.48□□□□□ -1.05
CLN6-217ENST00000636964 CD7P09564 240 aa8.47□□□□□ -1.05
CLN6-217ENST00000636964 UBE2D3P61077 147 aa8.47□□□□□ -1.05
CLN6-217ENST00000636964 UBE2D2P62837 147 aa8.47□□□□□ -1.05
CLN6-217ENST00000636964 PLEKHB2Q96CS7 222 aa8.47□□□□□ -1.05
CLN6-217ENST00000636964 PYGO1Q9Y3Y4 419 aa8.47□□□□□ -1.05
CLN6-217ENST00000636964 RNASE3P12724 160 aaKnown RBP8.47□□□□□ -1.05
CLN6-217ENST00000636964 PFN2P35080 140 aa8.47□□□□□ -1.05
CLN6-217ENST00000636964 DPH3Q96FX2 82 aa8.47□□□□□ -1.05
CLN6-217ENST00000636964 MYMXA0A1B0GTQ4 84 aa8.47□□□□□ -1.05
CLN6-217ENST00000636964 HTN1P15515 57 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms