RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 IGHV5-10-1A0A0J9YXX1 117 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 TRBV10-2A0A0K0K1G8 114 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 ZNF815PA8K554 130 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 A8MWP4 228 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 C16orf90A8MZG2 172 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 HCG22E2RYF7 251 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 F8WEM9 126 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 SH2D1AO60880 128 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 LEPROTL1O95214 131 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 IGKV1D-33P01593 117 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 IGKV1-33P01594 117 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 IGLV1-51P01701 117 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 CRPP02741 224 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 TRGV3P03979 118 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 IGHV4-34P06331 123 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 COX6CP09669 75 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 IFI27P40305 119 aaPredicted RBP1.85□□□□□ -2.11
CNOT1-223ENST00000628857 ATXN8Q156A1 80 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 C9orf116Q5BN46 136 aaPredicted RBP1.85□□□□□ -2.11
CNOT1-223ENST00000628857 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 ATP5EP2Q5VTU8 51 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 Q6JHZ5 121 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 SFTA2Q6UW10 78 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 ZNF818PQ6ZRF7 136 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 ADM2Q7Z4H4 148 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 C20orf203Q8NBC4 194 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 FAM167A-AS1Q96KT0 104 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 CDC42SE1Q9NRR8 79 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 HEATR1Q9H583 2144 aaKnown RBP1.85□□□□□ -2.11
CNOT1-223ENST00000628857 BAZ2BQ9UIF8 2168 aaKnown RBP1.85□□□□□ -2.11
CNOT1-223ENST00000628857 PCDH15Q96QU1 1955 aa1.85□□□□□ -2.11
CNOT1-223ENST00000628857 SIP14410 1827 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 KDM6BO15054 1643 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 NCOA6Q14686 2063 aaPredicted RBP1.84□□□□□ -2.11
CNOT1-223ENST00000628857 COL4A6Q14031 1691 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 RICTORQ6R327 1708 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 IGLV11-55A0A075B6I3 123 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 TRBV25-1A0A075B6N4 114 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 TMEM30CPA0ZSE6 113 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 FAM223BA6NKX1 122 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 BPY2O14599 106 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 LECT2O14960 151 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 MIFP14174 115 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 EDDM3BP56851 147 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 C1orf134Q5TEV5 83 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 ZNF826PQ6ZT77 177 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 LINC00574Q9H8X3 128 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 ZNF355PQ9NSJ1 428 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 TIMM9Q9Y5J7 89 aa1.84□□□□□ -2.11
CNOT1-223ENST00000628857 MPDZO75970 2070 aa1.84□□□□□ -2.12
CNOT1-223ENST00000628857 LRP5O75197 1615 aa1.84□□□□□ -2.12
CNOT1-223ENST00000628857 NHSL1Q5SYE7 1610 aa1.84□□□□□ -2.12
CNOT1-223ENST00000628857 TOGARAM1Q9Y4F4 1720 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 IGLV3-32A0A0A0MS00 114 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 IGHV3-73A0A0B4J1V6 119 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 TRAV22A0A0B4J277 110 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 TEX49A0A1B0GTD5 131 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 TMEM223A0PJW6 202 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 B4DSR2 109 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 CHKB-CPT1BH3BT56 60 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 IGHV1-8P0DP01 117 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 ROMO1P60602 79 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 FAM229BQ4G0N7 80 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 C2orf82Q6UX34 121 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 NDUFA11Q86Y39 141 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 Q8IYB0 196 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 CLECL1Q8IZS7 167 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 DYNAPQ8N1N2 210 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 LIMD2Q9BT23 127 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 BPESC1Q9GZL8 116 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 PROK2Q9HC23 129 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 C14orf132Q9NPU4 83 aa1.83□□□□□ -2.12
CNOT1-223ENST00000628857 BCORQ6W2J9 1755 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 TRBV6-6A0A0A6YYG2 114 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 IGHV1-3A0A0C4DH29 117 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 SPRR5A0A1B0GTR4 108 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 A0A1B0GVX0 72 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 SDHAF1A6NFY7 115 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 E7EUB6 86 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 ERC2-IT1O76042 136 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 IGHV1-46P01743 117 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 MGST1P10620 155 aaKnown RBP1.82□□□□□ -2.12
CNOT1-223ENST00000628857 DEFA4P12838 97 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 ZNF22P17026 224 aaPredicted RBP1.82□□□□□ -2.12
CNOT1-223ENST00000628857 SPINT3P49223 89 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 CAV3P56539 151 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 C10orf128Q5T292 105 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 FAM27BQ5VT28 67 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 ZCCHC23Q6ZST2 131 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 Q8NDZ9 215 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 ICOSQ9Y6W8 199 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 CD163L1Q9NR16 1453 aa1.82□□□□□ -2.12
CNOT1-223ENST00000628857 MDC1Q14676 2089 aaKnown RBP1.81□□□□□ -2.12
CNOT1-223ENST00000628857 DDX60Q8IY21 1712 aaKnown RBP1.81□□□□□ -2.12
CNOT1-223ENST00000628857 TRAV23DV6A0A075B6W5 121 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 IGHV3-15A0A0B4J1V0 119 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 TRAV1-2A0A0B4J238 106 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 A6NDX4 124 aa1.81□□□□□ -2.12
CNOT1-223ENST00000628857 LINC01549A6NIU2 74 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms