RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 RPL32P62910 135 aaKnown RBP11.6□□□□□ -0.55
NPHP4-211ENST00000622020 RBMY1FQ15415 496 aaKnown RBP11.6□□□□□ -0.55
NPHP4-211ENST00000622020 DEFB136Q30KP8 78 aa11.6□□□□□ -0.55
NPHP4-211ENST00000622020 DUX3Q96PT4 197 aa11.6□□□□□ -0.55
NPHP4-211ENST00000622020 TRBV6-5A0A0K0K1A5 114 aa11.6□□□□□ -0.55
NPHP4-211ENST00000622020 ADAMTSL4-AS1Q5T5F5 129 aa11.6□□□□□ -0.55
NPHP4-211ENST00000622020 SONP18583 2426 aaKnown RBP11.6□□□□□ -0.55
NPHP4-211ENST00000622020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.6□□□□□ -0.55
NPHP4-211ENST00000622020 IGKV2-29A2NJV5 120 aaPredicted RBP11.6□□□□□ -0.55
NPHP4-211ENST00000622020 MSMBP08118 114 aa11.6□□□□□ -0.55
NPHP4-211ENST00000622020 C10orf105Q8TEF2 133 aa11.6□□□□□ -0.55
NPHP4-211ENST00000622020 TIMM21Q9BVV7 248 aa11.6□□□□□ -0.55
NPHP4-211ENST00000622020 H3BUA1 57 aa11.59□□□□□ -0.55
NPHP4-211ENST00000622020 DEFB112Q30KQ8 113 aa11.59□□□□□ -0.55
NPHP4-211ENST00000622020 ZFAND6Q6FIF0 208 aa11.59□□□□□ -0.55
NPHP4-211ENST00000622020 NSUN5P1Q3KNT7 163 aa11.59□□□□□ -0.55
NPHP4-211ENST00000622020 TEX29Q8N6K0 151 aa11.59□□□□□ -0.55
NPHP4-211ENST00000622020 ZFYVE26Q68DK2 2539 aa11.59□□□□□ -0.55
NPHP4-211ENST00000622020 ABCA12Q86UK0 2595 aa11.58□□□□□ -0.56
NPHP4-211ENST00000622020 PSMB8P28062 276 aa11.58□□□□□ -0.56
NPHP4-211ENST00000622020 TRIAP1O43715 76 aa11.57□□□□□ -0.56
NPHP4-211ENST00000622020 Q6ZSN1 163 aa11.57□□□□□ -0.56
NPHP4-211ENST00000622020 K7EQG2 157 aa11.57□□□□□ -0.56
NPHP4-211ENST00000622020 CRLF1O75462 422 aa11.57□□□□□ -0.56
NPHP4-211ENST00000622020 RHOHQ15669 191 aa11.57□□□□□ -0.56
NPHP4-211ENST00000622020 ANKRD17O75179 2603 aaKnown RBP11.57□□□□□ -0.56
NPHP4-211ENST00000622020 K7EMT4 169 aa11.57□□□□□ -0.56
NPHP4-211ENST00000622020 CFHR3Q02985 330 aa11.57□□□□□ -0.56
NPHP4-211ENST00000622020 ZNF625Q96I27 306 aaPredicted RBP11.57□□□□□ -0.56
NPHP4-211ENST00000622020 C18orf65Q6ZTR6 163 aa11.56□□□□□ -0.56
NPHP4-211ENST00000622020 CLEC2BQ92478 149 aa11.56□□□□□ -0.56
NPHP4-211ENST00000622020 TNFRSF18Q9Y5U5 241 aa11.56□□□□□ -0.56
NPHP4-211ENST00000622020 NHLRC4P0CG21 123 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-211ENST00000622020 DEFB131AP59861 70 aa11.56□□□□□ -0.56
NPHP4-211ENST00000622020 JMJD1CQ15652 2540 aa11.55□□□□□ -0.56
NPHP4-211ENST00000622020 CHD6Q8TD26 2715 aa11.55□□□□□ -0.56
NPHP4-211ENST00000622020 EPG5Q9HCE0 2579 aa11.55□□□□□ -0.56
NPHP4-211ENST00000622020 GAGE5Q13069 117 aa11.55□□□□□ -0.56
NPHP4-211ENST00000622020 GAGE6Q13070 117 aa11.55□□□□□ -0.56
NPHP4-211ENST00000622020 LINC01620Q4KN68 170 aa11.55□□□□□ -0.56
NPHP4-211ENST00000622020 SBSPONQ8IVN8 264 aa11.55□□□□□ -0.56
NPHP4-211ENST00000622020 NDUFA12Q9UI09 145 aa11.55□□□□□ -0.56
NPHP4-211ENST00000622020 TRAV4A0A0B4J268 109 aa11.55□□□□□ -0.56
NPHP4-211ENST00000622020 FAM104AQ969W3 186 aa11.54□□□□□ -0.56
NPHP4-211ENST00000622020 NIPBLQ6KC79 2804 aaeCLIP11.54□□□□□ -0.56
NPHP4-211ENST00000622020 TEX15Q9BXT5 2789 aa11.54□□□□□ -0.56
NPHP4-211ENST00000622020 M0R2P5 195 aa11.54□□□□□ -0.56
NPHP4-211ENST00000622020 HOXD3P31249 432 aaPredicted RBP11.54□□□□□ -0.56
NPHP4-211ENST00000622020 LRRK2Q5S007 2527 aa11.54□□□□□ -0.56
NPHP4-211ENST00000622020 ATXN8Q156A1 80 aa11.53□□□□□ -0.56
NPHP4-211ENST00000622020 CCDC179H3BU77 68 aa11.53□□□□□ -0.56
NPHP4-211ENST00000622020 SLURP1P55000 103 aa11.53□□□□□ -0.56
NPHP4-211ENST00000622020 NF1P21359 2839 aa11.53□□□□□ -0.56
NPHP4-211ENST00000622020 IGHV3OR16-12A0A075B7B8 117 aa11.52□□□□□ -0.56
NPHP4-211ENST00000622020 A0A0B4J2C4 111 aa11.52□□□□□ -0.56
NPHP4-211ENST00000622020 BRI3O95415 125 aa11.52□□□□□ -0.56
NPHP4-211ENST00000622020 KHDC1LQ5JSQ8 128 aa11.52□□□□□ -0.56
NPHP4-211ENST00000622020 DOPEY1Q5JWR5 2465 aa11.52□□□□□ -0.56
NPHP4-211ENST00000622020 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.52□□□□□ -0.57
NPHP4-211ENST00000622020 LITAFQ99732 161 aa11.52□□□□□ -0.57
NPHP4-211ENST00000622020 CITED1Q99966 193 aa11.52□□□□□ -0.57
NPHP4-211ENST00000622020 C2orf82Q6UX34 121 aa11.51□□□□□ -0.57
NPHP4-211ENST00000622020 NAV2Q8IVL1 2488 aa11.51□□□□□ -0.57
NPHP4-211ENST00000622020 SNCGO76070 127 aa11.51□□□□□ -0.57
NPHP4-211ENST00000622020 GAGE2BQ13066 116 aa11.51□□□□□ -0.57
NPHP4-211ENST00000622020 GAGE2EQ4V326 116 aa11.51□□□□□ -0.57
NPHP4-211ENST00000622020 GAGE2DQ9UEU5 116 aa11.51□□□□□ -0.57
NPHP4-211ENST00000622020 TRGV11A0A075B6L2 103 aa11.5□□□□□ -0.57
NPHP4-211ENST00000622020 LINC00467Q9BRT7 94 aa11.5□□□□□ -0.57
NPHP4-211ENST00000622020 TMEM262E9PQX1 116 aa11.5□□□□□ -0.57
NPHP4-211ENST00000622020 ICOSQ9Y6W8 199 aa11.5□□□□□ -0.57
NPHP4-211ENST00000622020 IGHV1-58A0A0C4DH39 117 aa11.49□□□□□ -0.57
NPHP4-211ENST00000622020 B4DSR2 109 aa11.49□□□□□ -0.57
NPHP4-211ENST00000622020 NDUFA7O95182 113 aa11.49□□□□□ -0.57
NPHP4-211ENST00000622020 NDUFV3P56181 108 aaKnown RBP11.49□□□□□ -0.57
NPHP4-211ENST00000622020 CDKN2A-AS1Q9UH64 79 aa11.49□□□□□ -0.57
NPHP4-211ENST00000622020 CCDC168Q8NDH2 2452 aa11.49□□□□□ -0.57
NPHP4-211ENST00000622020 MRPS36P82909 103 aaKnown RBP11.49□□□□□ -0.57
NPHP4-211ENST00000622020 TTC32Q5I0X7 151 aa11.49□□□□□ -0.57
NPHP4-211ENST00000622020 RBMY1BA6NDE4 496 aaKnown RBP11.48□□□□□ -0.57
NPHP4-211ENST00000622020 RBMY1EA6NEQ0 496 aaKnown RBP11.48□□□□□ -0.57
NPHP4-211ENST00000622020 RBMY1DP0C7P1 496 aaKnown RBP11.48□□□□□ -0.57
NPHP4-211ENST00000622020 LINC01587Q99440 93 aa11.48□□□□□ -0.57
NPHP4-211ENST00000622020 TRAV8-4A0A0B4J246 113 aa11.48□□□□□ -0.57
NPHP4-211ENST00000622020 SMIM20Q8N5G0 67 aa11.47□□□□□ -0.57
NPHP4-211ENST00000622020 VSIG2Q96IQ7 327 aa11.47□□□□□ -0.57
NPHP4-211ENST00000622020 IGSF10Q6WRI0 2623 aa11.47□□□□□ -0.57
NPHP4-211ENST00000622020 AKAP9Q99996 3911 aa11.47□□□□□ -0.57
NPHP4-211ENST00000622020 H7C423 109 aa11.47□□□□□ -0.57
NPHP4-211ENST00000622020 DGAT2L7PQ6IED9 249 aa11.47□□□□□ -0.57
NPHP4-211ENST00000622020 SHISA2Q6UWI4 295 aa11.47□□□□□ -0.57
NPHP4-211ENST00000622020 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.47□□□□□ -0.57
NPHP4-211ENST00000622020 H3BMM0 161 aa11.46□□□□□ -0.57
NPHP4-211ENST00000622020 RPL13AP40429 203 aaKnown RBP11.46□□□□□ -0.57
NPHP4-211ENST00000622020 UBE2WQ96B02 151 aa11.46□□□□□ -0.57
NPHP4-211ENST00000622020 ODF3Q96PU9 254 aa11.46□□□□□ -0.57
NPHP4-211ENST00000622020 CHCHD7Q9BUK0 85 aa11.46□□□□□ -0.57
NPHP4-211ENST00000622020 PIEZO1Q92508 2521 aa11.46□□□□□ -0.57
NPHP4-211ENST00000622020 C3orf56Q8N813 242 aa11.46□□□□□ -0.57
NPHP4-211ENST00000622020 C15orf53Q8NAA6 179 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms