RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 FAM167A-AS1Q96KT0 104 aa4.55□□□□□ -1.68
RFX3-212ENST00000617270 SLX1AQ9BQ83 275 aa4.55□□□□□ -1.68
RFX3-212ENST00000617270 CDKN2A-AS1Q9UH64 79 aa4.55□□□□□ -1.68
RFX3-212ENST00000617270 CACNA1AO00555 2505 aa4.55□□□□□ -1.68
RFX3-212ENST00000617270 U3KQA8 63 aa4.55□□□□□ -1.68
RFX3-212ENST00000617270 SIPA1L3O60292 1781 aaPredicted RBP4.55□□□□□ -1.68
RFX3-212ENST00000617270 DEFB131BA0A096LNP1 70 aa4.55□□□□□ -1.68
RFX3-212ENST00000617270 TRIAP1O43715 76 aa4.55□□□□□ -1.68
RFX3-212ENST00000617270 UBE2D2P62837 147 aa4.55□□□□□ -1.68
RFX3-212ENST00000617270 SPANXB1Q9NS25 103 aaPredicted RBP4.55□□□□□ -1.68
RFX3-212ENST00000617270 FAM30AQ9NZY2 134 aa4.55□□□□□ -1.68
RFX3-212ENST00000617270 TMEM223A0PJW6 202 aa4.55□□□□□ -1.68
RFX3-212ENST00000617270 Q6ZVQ6 151 aa4.55□□□□□ -1.68
RFX3-212ENST00000617270 C6orf99Q4VX62 202 aa4.54□□□□□ -1.68
RFX3-212ENST00000617270 DNAJC9-AS1A6NH13 148 aa4.54□□□□□ -1.68
RFX3-212ENST00000617270 K7EMT4 169 aa4.54□□□□□ -1.68
RFX3-212ENST00000617270 ZFHX2Q9C0A1 2572 aaPredicted RBP4.54□□□□□ -1.68
RFX3-212ENST00000617270 NCKAP5O14513 1909 aa4.54□□□□□ -1.68
RFX3-212ENST00000617270 ACACBO00763 2458 aa4.54□□□□□ -1.68
RFX3-212ENST00000617270 LY6LH3BQJ8 138 aa4.54□□□□□ -1.68
RFX3-212ENST00000617270 LINC00308Q8TCZ7 52 aa4.54□□□□□ -1.68
RFX3-212ENST00000617270 M0R2N4 97 aa4.54□□□□□ -1.68
RFX3-212ENST00000617270 PTPN13Q12923 2485 aa4.54□□□□□ -1.68
RFX3-212ENST00000617270 C22orf34Q6ZV56 151 aa4.54□□□□□ -1.68
RFX3-212ENST00000617270 LINC00526Q96FQ7 95 aa4.54□□□□□ -1.68
RFX3-212ENST00000617270 IGLV2-18A0A075B6J9 118 aa4.54□□□□□ -1.68
RFX3-212ENST00000617270 CRIPAKQ8N1N5 446 aa4.54□□□□□ -1.68
RFX3-212ENST00000617270 HILS1P60008 231 aa4.53□□□□□ -1.68
RFX3-212ENST00000617270 Q6ZQY7 126 aa4.53□□□□□ -1.68
RFX3-212ENST00000617270 TRBV6-5A0A0K0K1A5 114 aa4.53□□□□□ -1.68
RFX3-212ENST00000617270 LCTP09848 1927 aa4.53□□□□□ -1.68
RFX3-212ENST00000617270 RPL37AP8A6NKH3 93 aa4.53□□□□□ -1.68
RFX3-212ENST00000617270 CELA1Q9UNI1 258 aa4.53□□□□□ -1.68
RFX3-212ENST00000617270 ZNF706Q9Y5V0 76 aaPredicted RBP4.53□□□□□ -1.68
RFX3-212ENST00000617270 SYCNQ0VAF6 134 aa4.53□□□□□ -1.68
RFX3-212ENST00000617270 RETNLBQ9BQ08 111 aa4.53□□□□□ -1.68
RFX3-212ENST00000617270 MRPS12O15235 138 aaKnown RBP4.53□□□□□ -1.68
RFX3-212ENST00000617270 INSL3P51460 131 aa4.53□□□□□ -1.68
RFX3-212ENST00000617270 PMAIP1Q13794 54 aa4.53□□□□□ -1.68
RFX3-212ENST00000617270 PRYO14603 147 aa4.53□□□□□ -1.68
RFX3-212ENST00000617270 SPINK1P00995 79 aa4.53□□□□□ -1.68
RFX3-212ENST00000617270 Q6Q795 121 aa4.53□□□□□ -1.68
RFX3-212ENST00000617270 PRRC2AP48634 2157 aaKnown RBP4.52□□□□□ -1.69
RFX3-212ENST00000617270 NANOS2P60321 138 aaKnown RBP4.52□□□□□ -1.69
RFX3-212ENST00000617270 IBA57-AS1B1ANH7 110 aa4.52□□□□□ -1.69
RFX3-212ENST00000617270 ZNF80P51504 273 aaPredicted RBP4.52□□□□□ -1.69
RFX3-212ENST00000617270 NDUFC1O43677 76 aa4.52□□□□□ -1.69
RFX3-212ENST00000617270 SBF2Q86WG5 1849 aa4.52□□□□□ -1.69
RFX3-212ENST00000617270 CCDC179H3BU77 68 aa4.52□□□□□ -1.69
RFX3-212ENST00000617270 NEXN-AS1Q8NBZ9 246 aa4.52□□□□□ -1.69
RFX3-212ENST00000617270 CCDC140Q96MF4 163 aa4.52□□□□□ -1.69
RFX3-212ENST00000617270 TCF20Q9UGU0 1960 aaKnown RBP4.52□□□□□ -1.69
RFX3-212ENST00000617270 E7EUB6 86 aa4.52□□□□□ -1.69
RFX3-212ENST00000617270 ZNF22P17026 224 aaPredicted RBP4.52□□□□□ -1.69
RFX3-212ENST00000617270 Q8N976 141 aa4.52□□□□□ -1.69
RFX3-212ENST00000617270 SPRY4Q9C004 299 aa4.52□□□□□ -1.69
RFX3-212ENST00000617270 IGLV3-1P01715 115 aa4.52□□□□□ -1.69
RFX3-212ENST00000617270 Q8N7P7 452 aa4.52□□□□□ -1.69
RFX3-212ENST00000617270 XIRP1Q702N8 1843 aaKnown RBP4.52□□□□□ -1.69
RFX3-212ENST00000617270 CCDC168Q8NDH2 2452 aa4.52□□□□□ -1.69
RFX3-212ENST00000617270 A8MZ25 164 aa4.51□□□□□ -1.69
RFX3-212ENST00000617270 DHRS4-AS1Q9P1J3 65 aa4.51□□□□□ -1.69
RFX3-212ENST00000617270 COL4A6Q14031 1691 aa4.51□□□□□ -1.69
RFX3-212ENST00000617270 LYRM9A8MSI8 78 aa4.51□□□□□ -1.69
RFX3-212ENST00000617270 SOSTDC1Q6X4U4 206 aa4.51□□□□□ -1.69
RFX3-212ENST00000617270 TTC28Q96AY4 2481 aa4.51□□□□□ -1.69
RFX3-212ENST00000617270 ESRGQ1W209 222 aa4.51□□□□□ -1.69
RFX3-212ENST00000617270 LINC00482Q8N8I6 264 aa4.51□□□□□ -1.69
RFX3-212ENST00000617270 CSPG4Q6UVK1 2322 aa4.51□□□□□ -1.69
RFX3-212ENST00000617270 C19orf71A6NCJ1 209 aa4.51□□□□□ -1.69
RFX3-212ENST00000617270 PLA2G2EQ9NZK7 142 aa4.51□□□□□ -1.69
RFX3-212ENST00000617270 TSC2P49815 1807 aa4.51□□□□□ -1.69
RFX3-212ENST00000617270 TRBV7-6A0A0J9YX20 115 aa4.5□□□□□ -1.69
RFX3-212ENST00000617270 THSD7AQ9UPZ6 1657 aa4.5□□□□□ -1.69
RFX3-212ENST00000617270 IGF1P05019 195 aa4.5□□□□□ -1.69
RFX3-212ENST00000617270 WFDC10AQ9H1F0 79 aa4.5□□□□□ -1.69
RFX3-212ENST00000617270 COL5A3P25940 1745 aaPredicted RBP4.5□□□□□ -1.69
RFX3-212ENST00000617270 IGLV4-3A0A075B6K6 122 aa4.5□□□□□ -1.69
RFX3-212ENST00000617270 MIFP14174 115 aa4.5□□□□□ -1.69
RFX3-212ENST00000617270 LINC00322Q6ZN03 302 aaPredicted RBP4.5□□□□□ -1.69
RFX3-212ENST00000617270 PLAC8L1A1L4L8 177 aa4.5□□□□□ -1.69
RFX3-212ENST00000617270 TMEM89A2RUT3 159 aa4.5□□□□□ -1.69
RFX3-212ENST00000617270 OTOGLQ3ZCN5 2332 aa4.5□□□□□ -1.69
RFX3-212ENST00000617270 H7C423 109 aa4.5□□□□□ -1.69
RFX3-212ENST00000617270 PLA2G2AP14555 144 aa4.5□□□□□ -1.69
RFX3-212ENST00000617270 ADORA2A-AS1P86434 159 aa4.5□□□□□ -1.69
RFX3-212ENST00000617270 CFAP126Q5VTH2 177 aa4.49□□□□□ -1.69
RFX3-212ENST00000617270 ZNF73O43830 326 aaPredicted RBP4.49□□□□□ -1.69
RFX3-212ENST00000617270 CUL9Q8IWT3 2517 aa4.49□□□□□ -1.69
RFX3-212ENST00000617270 TRBV6-8A0A0A6YYG3 113 aa4.49□□□□□ -1.69
RFX3-212ENST00000617270 LINC01548A6NM66 108 aa4.49□□□□□ -1.69
RFX3-212ENST00000617270 PLA2G2CQ5R387 149 aa4.49□□□□□ -1.69
RFX3-212ENST00000617270 IGF2-ASQ6U949 168 aa4.49□□□□□ -1.69
RFX3-212ENST00000617270 C20orf173Q96LM9 149 aa4.49□□□□□ -1.69
RFX3-212ENST00000617270 FREM1Q5H8C1 2179 aa4.49□□□□□ -1.69
RFX3-212ENST00000617270 LY6G6CO95867 125 aa4.49□□□□□ -1.69
RFX3-212ENST00000617270 IGHV6-1A0A0B4J1U7 121 aa4.49□□□□□ -1.69
RFX3-212ENST00000617270 WDR90Q96KV7 1748 aa4.49□□□□□ -1.69
RFX3-212ENST00000617270 ABCA2Q9BZC7 2435 aa4.49□□□□□ -1.69
RFX3-212ENST00000617270 TRBV30A0A0K0K1B3 111 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 345.1 ms