RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 RHODO00212 210 aa10.33□□□□□ -0.76
COL6A1-207ENST00000612273 CFHR3Q02985 330 aa10.33□□□□□ -0.76
COL6A1-207ENST00000612273 ANKRD29Q8N6D5 301 aa10.33□□□□□ -0.76
COL6A1-207ENST00000612273 CARD19Q96LW7 228 aa10.33□□□□□ -0.76
COL6A1-207ENST00000612273 A8MWV9 139 aa10.33□□□□□ -0.76
COL6A1-207ENST00000612273 K7EMT4 169 aa10.33□□□□□ -0.76
COL6A1-207ENST00000612273 AMELXQ99217 191 aa10.33□□□□□ -0.76
COL6A1-207ENST00000612273 EIF4EBP3O60516 100 aaPredicted RBP10.32□□□□□ -0.76
COL6A1-207ENST00000612273 HIVEP2P31629 2446 aa10.32□□□□□ -0.76
COL6A1-207ENST00000612273 A0A1W2PRX2 142 aa10.32□□□□□ -0.76
COL6A1-207ENST00000612273 UBE2E2Q96LR5 201 aa10.32□□□□□ -0.76
COL6A1-207ENST00000612273 ERG28Q9UKR5 140 aa10.32□□□□□ -0.76
COL6A1-207ENST00000612273 IGHV3-53P01767 116 aa10.32□□□□□ -0.76
COL6A1-207ENST00000612273 LINC01587Q99440 93 aa10.32□□□□□ -0.76
COL6A1-207ENST00000612273 NBEAL2Q6ZNJ1 2754 aa10.32□□□□□ -0.76
COL6A1-207ENST00000612273 TMEM223A0PJW6 202 aa10.31□□□□□ -0.76
COL6A1-207ENST00000612273 IGHV3-30-3P0DP02 117 aa10.31□□□□□ -0.76
COL6A1-207ENST00000612273 XGP55808 180 aa10.31□□□□□ -0.76
COL6A1-207ENST00000612273 UBE2D3P61077 147 aa10.31□□□□□ -0.76
COL6A1-207ENST00000612273 UBE2D2P62837 147 aa10.31□□□□□ -0.76
COL6A1-207ENST00000612273 CKS1BP61024 79 aa10.31□□□□□ -0.76
COL6A1-207ENST00000612273 TIMM21Q9BVV7 248 aa10.31□□□□□ -0.76
COL6A1-207ENST00000612273 PRORYQ9H606 182 aa10.31□□□□□ -0.76
COL6A1-207ENST00000612273 XCL2Q9UBD3 114 aa10.31□□□□□ -0.76
COL6A1-207ENST00000612273 TMEM61Q8N0U2 210 aa10.31□□□□□ -0.76
COL6A1-207ENST00000612273 SPATA25Q9BR10 227 aa10.31□□□□□ -0.76
COL6A1-207ENST00000612273 FLNAP21333 2647 aaKnown RBP10.3□□□□□ -0.76
COL6A1-207ENST00000612273 TRBV7-9A0A0J9YWB2 115 aa10.3□□□□□ -0.76
COL6A1-207ENST00000612273 LINC01619G3V211 115 aa10.3□□□□□ -0.76
COL6A1-207ENST00000612273 CIDEAO60543 219 aa10.3□□□□□ -0.76
COL6A1-207ENST00000612273 CDIP1Q9H305 208 aa10.3□□□□□ -0.76
COL6A1-207ENST00000612273 SLC25A20O43772 301 aa10.3□□□□□ -0.76
COL6A1-207ENST00000612273 POM121L12Q8N7R1 296 aa10.29□□□□□ -0.76
COL6A1-207ENST00000612273 A0A0J9YXY3 114 aa10.29□□□□□ -0.76
COL6A1-207ENST00000612273 TRBV6-5A0A0K0K1A5 114 aa10.29□□□□□ -0.76
COL6A1-207ENST00000612273 LEPROTO15243 131 aa10.29□□□□□ -0.76
COL6A1-207ENST00000612273 ADAMTSL4-AS1Q5T5F5 129 aa10.29□□□□□ -0.76
COL6A1-207ENST00000612273 TEN1Q86WV5 123 aa10.29□□□□□ -0.76
COL6A1-207ENST00000612273 LYRM7Q5U5X0 104 aa10.29□□□□□ -0.76
COL6A1-207ENST00000612273 IGHV3-33P01772 117 aa10.28□□□□□ -0.76
COL6A1-207ENST00000612273 DGAT2L7PQ6IED9 249 aa10.28□□□□□ -0.76
COL6A1-207ENST00000612273 NTN5Q8WTR8 489 aaPredicted RBP10.28□□□□□ -0.76
COL6A1-207ENST00000612273 NDUFA12Q9UI09 145 aa10.28□□□□□ -0.76
COL6A1-207ENST00000612273 RBMY1BA6NDE4 496 aaKnown RBP10.28□□□□□ -0.76
COL6A1-207ENST00000612273 RBMY1EA6NEQ0 496 aaKnown RBP10.28□□□□□ -0.76
COL6A1-207ENST00000612273 NDUFA7O95182 113 aa10.28□□□□□ -0.76
COL6A1-207ENST00000612273 RBMY1DP0C7P1 496 aaKnown RBP10.28□□□□□ -0.76
COL6A1-207ENST00000612273 Q6ZUT4 128 aa10.28□□□□□ -0.76
COL6A1-207ENST00000612273 TRGV11A0A075B6L2 103 aa10.27□□□□□ -0.76
COL6A1-207ENST00000612273 PPDPFLQ8WWR9 84 aa10.27□□□□□ -0.76
COL6A1-207ENST00000612273 USP24Q9UPU5 2620 aa10.27□□□□□ -0.77
COL6A1-207ENST00000612273 NSUN5P1Q3KNT7 163 aa10.27□□□□□ -0.77
COL6A1-207ENST00000612273 LINC01356Q8N9X3 169 aa10.27□□□□□ -0.77
COL6A1-207ENST00000612273 DYNLRB2Q8TF09 96 aa10.27□□□□□ -0.77
COL6A1-207ENST00000612273 GEMIN7Q9H840 131 aaKnown RBP10.27□□□□□ -0.77
COL6A1-207ENST00000612273 RHOHQ15669 191 aa10.27□□□□□ -0.77
COL6A1-207ENST00000612273 LINC00467Q9BRT7 94 aa10.26□□□□□ -0.77
COL6A1-207ENST00000612273 A0A1B0GV72 72 aa10.26□□□□□ -0.77
COL6A1-207ENST00000612273 KRTAP10-9P60411 292 aa10.26□□□□□ -0.77
COL6A1-207ENST00000612273 RPL32P62910 135 aaKnown RBP10.26□□□□□ -0.77
COL6A1-207ENST00000612273 CLEC2BQ92478 149 aa10.26□□□□□ -0.77
COL6A1-207ENST00000612273 ITPR3Q14573 2671 aa10.26□□□□□ -0.77
COL6A1-207ENST00000612273 IGKV3OR2-268A0A0C4DH90 116 aa10.25□□□□□ -0.77
COL6A1-207ENST00000612273 TEX49A0A1B0GTD5 131 aa10.25□□□□□ -0.77
COL6A1-207ENST00000612273 VPREB3Q9UKI3 123 aa10.25□□□□□ -0.77
COL6A1-207ENST00000612273 ZNF469Q96JG9 3925 aaPredicted RBP10.25□□□□□ -0.77
COL6A1-207ENST00000612273 TMEM263Q8WUH6 116 aaKnown RBP10.25□□□□□ -0.77
COL6A1-207ENST00000612273 H3BMM0 161 aa10.25□□□□□ -0.77
COL6A1-207ENST00000612273 SETXQ7Z333 2677 aaKnown RBP10.24□□□□□ -0.77
COL6A1-207ENST00000612273 TRBV20-1A0A075B6N2 111 aa10.24□□□□□ -0.77
COL6A1-207ENST00000612273 TRAV13-1A0A0B4J241 112 aa10.24□□□□□ -0.77
COL6A1-207ENST00000612273 BRI3O95415 125 aa10.24□□□□□ -0.77
COL6A1-207ENST00000612273 TRIAP1O43715 76 aa10.24□□□□□ -0.77
COL6A1-207ENST00000612273 ZNF702PQ9H963 129 aa10.24□□□□□ -0.77
COL6A1-207ENST00000612273 CDKN2A-AS1Q9UH64 79 aa10.24□□□□□ -0.77
COL6A1-207ENST00000612273 GCN1Q92616 2671 aaKnown RBP10.23□□□□□ -0.77
COL6A1-207ENST00000612273 TRAV26-1A0A087WT03 109 aa10.23□□□□□ -0.77
COL6A1-207ENST00000612273 FAM104AQ969W3 186 aa10.23□□□□□ -0.77
COL6A1-207ENST00000612273 TRGV1A0A0A0MS02 117 aa10.22□□□□□ -0.77
COL6A1-207ENST00000612273 APCP25054 2843 aa10.22□□□□□ -0.77
COL6A1-207ENST00000612273 M0R2P5 195 aa10.22□□□□□ -0.77
COL6A1-207ENST00000612273 CRYBA4P53673 196 aa10.22□□□□□ -0.77
COL6A1-207ENST00000612273 CLUHP3Q96NS8 147 aa10.22□□□□□ -0.77
COL6A1-207ENST00000612273 LINC01620Q4KN68 170 aa10.21□□□□□ -0.78
COL6A1-207ENST00000612273 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.21□□□□□ -0.78
COL6A1-207ENST00000612273 AKAP9Q99996 3911 aa10.2□□□□□ -0.78
COL6A1-207ENST00000612273 ZNF415Q09FC8 603 aa10.2□□□□□ -0.78
COL6A1-207ENST00000612273 ODF3Q96PU9 254 aa10.2□□□□□ -0.78
COL6A1-207ENST00000612273 CHCHD7Q9BUK0 85 aa10.2□□□□□ -0.78
COL6A1-207ENST00000612273 IGHV1-58A0A0C4DH39 117 aa10.19□□□□□ -0.78
COL6A1-207ENST00000612273 COX6A2Q02221 97 aa10.19□□□□□ -0.78
COL6A1-207ENST00000612273 MAP6D1Q9H9H5 199 aa10.19□□□□□ -0.78
COL6A1-207ENST00000612273 GATA3P23771 443 aa10.19□□□□□ -0.78
COL6A1-207ENST00000612273 UBE2D4Q9Y2X8 147 aa10.19□□□□□ -0.78
COL6A1-207ENST00000612273 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.18□□□□□ -0.78
COL6A1-207ENST00000612273 LINC00694P0DN24 101 aa10.18□□□□□ -0.78
COL6A1-207ENST00000612273 C2orf82Q6UX34 121 aa10.18□□□□□ -0.78
COL6A1-207ENST00000612273 ATP6V0E2Q8NHE4 81 aa10.18□□□□□ -0.78
COL6A1-207ENST00000612273 CRLF1O75462 422 aa10.18□□□□□ -0.78
COL6A1-207ENST00000612273 MRPS36P82909 103 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms