RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 ICOSQ9Y6W8 199 aa2.87□□□□□ -1.95
RNF38-210ENST00000611646 ELANEP08246 267 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 DAD1P61803 113 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 IGF2-ASQ6U949 168 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 C18orf65Q6ZTR6 163 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 Q6ZUT4 128 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 Q9HAA7 133 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 HIVEP3Q5T1R4 2406 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 IGHG2P01859 326 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 BAALC-AS2P0C853 105 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 INSL3P51460 131 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 HERVK_113P63121 156 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 NFE4Q86UQ8 179 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 LENEPQ9Y5L5 61 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 CRLF1O75462 422 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 MT-ATP8P03928 68 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 HAMPP81172 84 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 RHOHQ15669 191 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 NDUFA11Q86Y39 141 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 IGKV3D-7A0A0C4DH55 119 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 A0A0J9YX75 114 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 TEX49A0A1B0GTD5 131 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 IGHV3-30-3P0DP02 117 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 HIGD1BQ9P298 99 aa2.86□□□□□ -1.95
RNF38-210ENST00000611646 SONP18583 2426 aaKnown RBP2.85□□□□□ -1.95
RNF38-210ENST00000611646 TRAV25A0A0B4J276 109 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 TRBV6-1A0A0K0K1D8 114 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 H3BUA1 57 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 LINC01620Q4KN68 170 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 NEXN-AS1Q8NBZ9 246 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 TRAV4A0A0B4J268 109 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 A6NDX4 124 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 K7EQD1 137 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 GYPEP15421 78 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 ZFAND2AQ8N6M9 145 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 SETD2Q9BYW2 2564 aaPredicted RBP2.85□□□□□ -1.95
RNF38-210ENST00000611646 SOCS3O14543 225 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 Q6ZTI0 123 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 TEN1Q86WV5 123 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 C20orf203Q8NBC4 194 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 DEFB105AQ8NG35 78 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 CITED2Q99967 270 aaPredicted RBP2.85□□□□□ -1.95
RNF38-210ENST00000611646 TRAV26-1A0A087WT03 109 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 CLPSL1A2RUU4 121 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 NCR3O14931 201 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 MRAPQ8TCY5 172 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 LINC00467Q9BRT7 94 aa2.85□□□□□ -1.95
RNF38-210ENST00000611646 ANKRD11Q6UB99 2663 aaPredicted RBP2.85□□□□□ -1.95
RNF38-210ENST00000611646 TACC2O95359 2948 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 CHD8Q9HCK8 2581 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 ZNF561-AS1K7EIQ3 104 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 LGALS9O00182 355 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 IGHV3-30P01768 117 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 IGHV3-33P01772 117 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 ATP5G1P05496 136 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 IGHV3-30-5P0DP03 117 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 NRACQ8N912 160 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 SND1-IT1Q9HBX3 110 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 U3KQK5 164 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 PRB2P02812 416 aaPredicted RBP2.84□□□□□ -1.95
RNF38-210ENST00000611646 DEFB113Q30KQ7 82 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 SLC25A29Q8N8R3 303 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 WFDC10AQ9H1F0 79 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 SPANXB1Q9NS25 103 aaPredicted RBP2.84□□□□□ -1.95
RNF38-210ENST00000611646 NAV2Q8IVL1 2488 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 MYO9AB2RTY4 2548 aa2.84□□□□□ -1.95
RNF38-210ENST00000611646 TRBV7-3A0A075B6L6 115 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 A0A0J9YXY3 114 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 A0A1W2PPR1 153 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 J3QLI3 93 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 RNASE3P12724 160 aaKnown RBP2.84□□□□□ -1.96
RNF38-210ENST00000611646 C11orf71Q6IPW1 123 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 GPHB5Q86YW7 130 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 TIMM17AQ99595 171 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 MAP6D1Q9H9H5 199 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 FAM236AA0A1B0GUQ0 79 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 FAM236BA0A1B0GV22 79 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 DEFB135Q30KP9 77 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 PIK3CD-AS1Q5SR53 167 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 Q6ZSV7 163 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 MIR7-3HGQ8N6C7 128 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 SPANXA1Q9NS26 97 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 CDKN2A-AS1Q9UH64 79 aa2.84□□□□□ -1.96
RNF38-210ENST00000611646 TRAV13-2A0A0B4J235 113 aa2.83□□□□□ -1.96
RNF38-210ENST00000611646 FSTL3O95633 263 aa2.83□□□□□ -1.96
RNF38-210ENST00000611646 FBXL19-AS1Q494R0 122 aa2.83□□□□□ -1.96
RNF38-210ENST00000611646 SMIM20Q8N5G0 67 aa2.83□□□□□ -1.96
RNF38-210ENST00000611646 RNF183Q96D59 192 aa2.83□□□□□ -1.96
RNF38-210ENST00000611646 VSIG2Q96IQ7 327 aa2.83□□□□□ -1.96
RNF38-210ENST00000611646 RAI1Q7Z5J4 1906 aaPredicted RBP2.83□□□□□ -1.96
RNF38-210ENST00000611646 EXPH5Q8NEV8 1989 aa2.83□□□□□ -1.96
RNF38-210ENST00000611646 IGHV4-28A0A0C4DH34 117 aa2.83□□□□□ -1.96
RNF38-210ENST00000611646 IGHV1-58A0A0C4DH39 117 aa2.83□□□□□ -1.96
RNF38-210ENST00000611646 LECT2O14960 151 aa2.83□□□□□ -1.96
RNF38-210ENST00000611646 AVPP01185 164 aa2.83□□□□□ -1.96
RNF38-210ENST00000611646 SLPIP03973 132 aa2.83□□□□□ -1.96
RNF38-210ENST00000611646 COX7B2Q8TF08 81 aa2.83□□□□□ -1.96
RNF38-210ENST00000611646 ZNF580Q9UK33 172 aa2.83□□□□□ -1.96
RNF38-210ENST00000611646 IGLV4-3A0A075B6K6 122 aa2.83□□□□□ -1.96
RNF38-210ENST00000611646 A0A096LNJ9 63 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms