RNA–Protein interactions for RNA: ENST00000601524.5

LINC02028-214, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 616 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-214	ENST00000601524		A8MWL6	223 aa		10.66	□□□□□ -0.7
LINC02028-214	ENST00000601524	PRSS1	P07477	247 aa		10.66	□□□□□ -0.7
LINC02028-214	ENST00000601524	LINC00694	P0DN24	101 aa		10.66	□□□□□ -0.7
LINC02028-214	ENST00000601524	KRTAP10-8	P60410	259 aa		10.66	□□□□□ -0.7
LINC02028-214	ENST00000601524		Q0VG73	95 aa		10.66	□□□□□ -0.7
LINC02028-214	ENST00000601524	C10orf91	Q5T1B1	145 aa		10.66	□□□□□ -0.7
LINC02028-214	ENST00000601524	SPANXN1	Q5VSR9	72 aa		10.66	□□□□□ -0.7
LINC02028-214	ENST00000601524	UFSP1	Q6NVU6	142 aa		10.66	□□□□□ -0.7
LINC02028-214	ENST00000601524	ZFP82	Q8N141	532 aa		10.66	□□□□□ -0.7
LINC02028-214	ENST00000601524	SEC11C	Q9BY50	192 aa		10.66	□□□□□ -0.7
LINC02028-214	ENST00000601524		Q9UF83	564 aa		10.66	□□□□□ -0.7
LINC02028-214	ENST00000601524	NTF3	P20783	257 aa		10.65	□□□□□ -0.7
LINC02028-214	ENST00000601524	CTRL	P40313	264 aa		10.65	□□□□□ -0.7
LINC02028-214	ENST00000601524	CT83	Q5H943	113 aa		10.65	□□□□□ -0.7
LINC02028-214	ENST00000601524	KCNIP4	Q6PIL6	250 aa		10.65	□□□□□ -0.7
LINC02028-214	ENST00000601524	TSKU	Q8WUA8	353 aa		10.65	□□□□□ -0.7
LINC02028-214	ENST00000601524	FOXA3	P55318	350 aa	Predicted RBP	10.64	□□□□□ -0.71
LINC02028-214	ENST00000601524	FAM74A4	Q5TZK3	123 aa		10.64	□□□□□ -0.71
LINC02028-214	ENST00000601524	WDR73	Q6P4I2	378 aa		10.64	□□□□□ -0.71
LINC02028-214	ENST00000601524	HIGD1C	A8MV81	97 aa		10.63	□□□□□ -0.71
LINC02028-214	ENST00000601524		A8MWV9	139 aa		10.63	□□□□□ -0.71
LINC02028-214	ENST00000601524		F2Z2F3	143 aa		10.63	□□□□□ -0.71
LINC02028-214	ENST00000601524	PHOX2A	O14813	284 aa		10.63	□□□□□ -0.71
LINC02028-214	ENST00000601524	HLA-DQA1	P01909	254 aa		10.63	□□□□□ -0.71
LINC02028-214	ENST00000601524	PIK3CD-AS1	Q5SR53	167 aa		10.63	□□□□□ -0.71
LINC02028-214	ENST00000601524	C14orf178	Q8N769	122 aa	Predicted RBP	10.63	□□□□□ -0.71
LINC02028-214	ENST00000601524	NUP35	Q8NFH5	326 aa		10.63	□□□□□ -0.71
LINC02028-214	ENST00000601524	KIF25-AS1	Q9Y6Z4	181 aa		10.63	□□□□□ -0.71
LINC02028-214	ENST00000601524		A0A087WYN8	130 aa		10.62	□□□□□ -0.71
LINC02028-214	ENST00000601524	SMIM27	A0A1W2PRY6	76 aa		10.62	□□□□□ -0.71
LINC02028-214	ENST00000601524	CACNG7	P62955	275 aa		10.62	□□□□□ -0.71
LINC02028-214	ENST00000601524	PNRC1	Q12796	327 aa	Predicted RBP	10.62	□□□□□ -0.71
LINC02028-214	ENST00000601524	CIRBP	Q14011	172 aa	Known RBP	10.62	□□□□□ -0.71
LINC02028-214	ENST00000601524	C7orf33	Q8WU49	177 aa		10.62	□□□□□ -0.71
LINC02028-214	ENST00000601524	CHCHD7	Q9BUK0	85 aa		10.62	□□□□□ -0.71
LINC02028-214	ENST00000601524	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.62	□□□□□ -0.71
LINC02028-214	ENST00000601524	FAT4	Q6V0I7	4981 aa		10.62	□□□□□ -0.71
LINC02028-214	ENST00000601524		A0A0U1RQV1	116 aa		10.61	□□□□□ -0.71
LINC02028-214	ENST00000601524	TWIST1	Q15672	202 aa		10.61	□□□□□ -0.71
LINC02028-214	ENST00000601524	CNFN	Q9BYD5	112 aa		10.61	□□□□□ -0.71
LINC02028-214	ENST00000601524	GFRA4	Q9GZZ7	299 aa		10.61	□□□□□ -0.71
LINC02028-214	ENST00000601524	CRP	P02741	224 aa		10.6	□□□□□ -0.71
LINC02028-214	ENST00000601524	ENHO	Q6UWT2	76 aa		10.6	□□□□□ -0.71
LINC02028-214	ENST00000601524	ZFP2	Q6ZN57	461 aa		10.6	□□□□□ -0.71
LINC02028-214	ENST00000601524	RNF185	Q96GF1	192 aa		10.6	□□□□□ -0.71
LINC02028-214	ENST00000601524	MUC2	Q02817	5179 aa		10.6	□□□□□ -0.71
LINC02028-214	ENST00000601524	MT-ND4L	P03901	98 aa		10.59	□□□□□ -0.71
LINC02028-214	ENST00000601524	FAM231B	A6NCW3	169 aa		10.58	□□□□□ -0.72
LINC02028-214	ENST00000601524	TMEM262	E9PQX1	116 aa		10.58	□□□□□ -0.72
LINC02028-214	ENST00000601524	CHTF8	P0CG12	524 aa		10.58	□□□□□ -0.72
LINC02028-214	ENST00000601524	REG3G	Q6UW15	175 aa		10.58	□□□□□ -0.72
LINC02028-214	ENST00000601524	CLRN3	Q8NCR9	226 aa		10.58	□□□□□ -0.72
LINC02028-214	ENST00000601524	ANAPC16	Q96DE5	110 aa		10.58	□□□□□ -0.72
LINC02028-214	ENST00000601524	NAT8B	Q9UHF3	227 aa		10.58	□□□□□ -0.72
LINC02028-214	ENST00000601524		A0A1B0GUT8	65 aa		10.57	□□□□□ -0.72
LINC02028-214	ENST00000601524	C7orf77	A4D0Y5	90 aa		10.57	□□□□□ -0.72
LINC02028-214	ENST00000601524	PPP1R2P9	O14990	202 aa		10.57	□□□□□ -0.72
LINC02028-214	ENST00000601524	APOC3	P02656	99 aa		10.57	□□□□□ -0.72
LINC02028-214	ENST00000601524	MGP	P08493	103 aa		10.57	□□□□□ -0.72
LINC02028-214	ENST00000601524	ZNF56	Q15929	161 aa		10.57	□□□□□ -0.72
LINC02028-214	ENST00000601524	AP1S3	Q96PC3	154 aa		10.57	□□□□□ -0.72
LINC02028-214	ENST00000601524		F5H697	171 aa		10.56	□□□□□ -0.72
LINC02028-214	ENST00000601524	RHOD	O00212	210 aa		10.56	□□□□□ -0.72
LINC02028-214	ENST00000601524	PRR3	P79522	188 aa	Known RBP	10.56	□□□□□ -0.72
LINC02028-214	ENST00000601524	TRGC1	P0CF51	173 aa		10.55	□□□□□ -0.72
LINC02028-214	ENST00000601524	SMIM17	P0DL12	118 aa		10.55	□□□□□ -0.72
LINC02028-214	ENST00000601524	RAB4B	P61018	213 aa		10.55	□□□□□ -0.72
LINC02028-214	ENST00000601524	MRPL54	Q6P161	138 aa	Known RBP	10.55	□□□□□ -0.72
LINC02028-214	ENST00000601524	SPACA4	Q8TDM5	124 aa		10.55	□□□□□ -0.72
LINC02028-214	ENST00000601524	IGHV3-64	A0A075B6Q5	118 aa		10.54	□□□□□ -0.72
LINC02028-214	ENST00000601524	TRAV26-2	A0A0B4J265	109 aa		10.54	□□□□□ -0.72
LINC02028-214	ENST00000601524	SUMO4	Q6EEV6	95 aa		10.54	□□□□□ -0.72
LINC02028-214	ENST00000601524	BORCS7	Q96B45	105 aa		10.54	□□□□□ -0.72
LINC02028-214	ENST00000601524	RPS10P5	Q9NQ39	176 aa		10.54	□□□□□ -0.72
LINC02028-214	ENST00000601524	PLAC8	Q9NZF1	115 aa		10.54	□□□□□ -0.72
LINC02028-214	ENST00000601524	ANG	P03950	147 aa	Known RBP	10.53	□□□□□ -0.72
LINC02028-214	ENST00000601524	CAMP	P49913	170 aa		10.53	□□□□□ -0.72
LINC02028-214	ENST00000601524	RIG	Q13278	110 aa		10.53	□□□□□ -0.72
LINC02028-214	ENST00000601524	SPINK6	Q6UWN8	80 aa		10.53	□□□□□ -0.72
LINC02028-214	ENST00000601524		A0A1B0GXF2	115 aa		10.52	□□□□□ -0.73
LINC02028-214	ENST00000601524	CNBP	P62633	177 aa	Known RBP	10.52	□□□□□ -0.73
LINC02028-214	ENST00000601524	MIA	Q16674	131 aa		10.52	□□□□□ -0.73
LINC02028-214	ENST00000601524	AMN1	Q8IY45	258 aa		10.52	□□□□□ -0.73
LINC02028-214	ENST00000601524	GATD1	Q8NB37	220 aa		10.52	□□□□□ -0.73
LINC02028-214	ENST00000601524	NEXN-AS1	Q8NBZ9	246 aa		10.52	□□□□□ -0.73
LINC02028-214	ENST00000601524	CTDSP1	Q9GZU7	261 aa		10.52	□□□□□ -0.73
LINC02028-214	ENST00000601524		M0QY20	66 aa		10.51	□□□□□ -0.73
LINC02028-214	ENST00000601524	RAB4A	P20338	218 aa		10.51	□□□□□ -0.73
LINC02028-214	ENST00000601524	NDUFA5	Q16718	116 aa		10.51	□□□□□ -0.73
LINC02028-214	ENST00000601524	TMEM191A	Q9H0A3	160 aa		10.51	□□□□□ -0.73
LINC02028-214	ENST00000601524	hDV102S1	A0JD36	115 aa		10.5	□□□□□ -0.73
LINC02028-214	ENST00000601524	RHEB	Q15382	184 aa		10.5	□□□□□ -0.73
LINC02028-214	ENST00000601524	MPV17L2	Q567V2	206 aa		10.5	□□□□□ -0.73
LINC02028-214	ENST00000601524	RPL39L	Q96EH5	51 aa	Known RBP	10.5	□□□□□ -0.73
LINC02028-214	ENST00000601524	SMKR1	H3BMG3	65 aa		10.49	□□□□□ -0.73
LINC02028-214	ENST00000601524	SNAPIN	O95295	136 aa		10.49	□□□□□ -0.73
LINC02028-214	ENST00000601524	SVBP	Q8N300	66 aa		10.49	□□□□□ -0.73
LINC02028-214	ENST00000601524	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.48	□□□□□ -0.73
LINC02028-214	ENST00000601524	HBB	P68871	147 aa		10.48	□□□□□ -0.73
LINC02028-214	ENST00000601524	LCE2A	Q5TA79	106 aa	Predicted RBP	10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms