RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 LINC01006Q8NI28 216 aa12.02□□□□□ -0.49
PRKCSH-217ENST00000592741 SPANXB1Q9NS25 103 aaPredicted RBP12.02□□□□□ -0.49
PRKCSH-217ENST00000592741 NACAE9PAV3 2078 aa12.02□□□□□ -0.49
PRKCSH-217ENST00000592741 AMELXQ99217 191 aa12.01□□□□□ -0.49
PRKCSH-217ENST00000592741 IGHV3OR16-12A0A075B7B8 117 aa12□□□□□ -0.49
PRKCSH-217ENST00000592741 PLA2G2AP14555 144 aa12□□□□□ -0.49
PRKCSH-217ENST00000592741 AZU1P20160 251 aa12□□□□□ -0.49
PRKCSH-217ENST00000592741 C1orf158Q8N1D5 194 aa12□□□□□ -0.49
PRKCSH-217ENST00000592741 CHCHD7Q9BUK0 85 aa12□□□□□ -0.49
PRKCSH-217ENST00000592741 J3QKU1 62 aa11.99□□□□□ -0.49
PRKCSH-217ENST00000592741 CMC4P56277 68 aaPredicted RBP11.99□□□□□ -0.49
PRKCSH-217ENST00000592741 SLC25A29Q8N8R3 303 aa11.99□□□□□ -0.49
PRKCSH-217ENST00000592741 SPANXA1Q9NS26 97 aa11.99□□□□□ -0.49
PRKCSH-217ENST00000592741 Q9UF83 564 aa11.99□□□□□ -0.49
PRKCSH-217ENST00000592741 MYO9AB2RTY4 2548 aa11.99□□□□□ -0.49
PRKCSH-217ENST00000592741 UBE2D1P51668 147 aa11.99□□□□□ -0.49
PRKCSH-217ENST00000592741 COTL1Q14019 142 aa11.98□□□□□ -0.49
PRKCSH-217ENST00000592741 IL17DQ8TAD2 202 aa11.98□□□□□ -0.49
PRKCSH-217ENST00000592741 FAM104AQ969W3 186 aa11.98□□□□□ -0.49
PRKCSH-217ENST00000592741 PGPEP1Q9NXJ5 209 aa11.98□□□□□ -0.49
PRKCSH-217ENST00000592741 NBPF19A0A087WUL8 3843 aa11.97□□□□□ -0.49
PRKCSH-217ENST00000592741 SAP30O75446 220 aa11.97□□□□□ -0.49
PRKCSH-217ENST00000592741 IGHV3-30P01768 117 aa11.97□□□□□ -0.49
PRKCSH-217ENST00000592741 IGHV3-30-5P0DP03 117 aa11.97□□□□□ -0.49
PRKCSH-217ENST00000592741 MRPS36P82909 103 aaKnown RBP11.97□□□□□ -0.49
PRKCSH-217ENST00000592741 CEMP1Q6PRD7 247 aaPredicted RBP11.97□□□□□ -0.49
PRKCSH-217ENST00000592741 VPS25Q9BRG1 176 aa11.97□□□□□ -0.49
PRKCSH-217ENST00000592741 UBE2D4Q9Y2X8 147 aa11.97□□□□□ -0.49
PRKCSH-217ENST00000592741 IGHV3-64A0A075B6Q5 118 aa11.96□□□□□ -0.49
PRKCSH-217ENST00000592741 TRGV1A0A0A0MS02 117 aa11.96□□□□□ -0.49
PRKCSH-217ENST00000592741 TLN2Q9Y4G6 2542 aa11.96□□□□□ -0.49
PRKCSH-217ENST00000592741 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.96□□□□□ -0.5
PRKCSH-217ENST00000592741 IGHV3-38A0A0C4DH36 116 aa11.96□□□□□ -0.5
PRKCSH-217ENST00000592741 IGKV2-29A2NJV5 120 aaPredicted RBP11.96□□□□□ -0.5
PRKCSH-217ENST00000592741 ZNF418Q8TF45 676 aaPredicted RBP11.96□□□□□ -0.5
PRKCSH-217ENST00000592741 RNASE13Q5GAN3 156 aaKnown RBP11.95□□□□□ -0.5
PRKCSH-217ENST00000592741 TMEM263Q8WUH6 116 aaKnown RBP11.95□□□□□ -0.5
PRKCSH-217ENST00000592741 SONP18583 2426 aaKnown RBP11.94□□□□□ -0.5
PRKCSH-217ENST00000592741 APOMO95445 188 aa11.94□□□□□ -0.5
PRKCSH-217ENST00000592741 TIMM21Q9BVV7 248 aa11.94□□□□□ -0.5
PRKCSH-217ENST00000592741 FLNAP21333 2647 aaKnown RBP11.94□□□□□ -0.5
PRKCSH-217ENST00000592741 TINCRA0A1B0GVN0 87 aa11.93□□□□□ -0.5
PRKCSH-217ENST00000592741 F8W1H4 67 aa11.93□□□□□ -0.5
PRKCSH-217ENST00000592741 H3BMG7 143 aa11.93□□□□□ -0.5
PRKCSH-217ENST00000592741 HILS1P60008 231 aa11.93□□□□□ -0.5
PRKCSH-217ENST00000592741 Q6ZUT4 128 aa11.93□□□□□ -0.5
PRKCSH-217ENST00000592741 NDUFA11Q86Y39 141 aa11.93□□□□□ -0.5
PRKCSH-217ENST00000592741 TENM4Q6N022 2769 aa11.92□□□□□ -0.5
PRKCSH-217ENST00000592741 TSPAN13O95857 204 aa11.92□□□□□ -0.5
PRKCSH-217ENST00000592741 IGLV1-51P01701 117 aa11.92□□□□□ -0.5
PRKCSH-217ENST00000592741 IGHV3-30-3P0DP02 117 aa11.92□□□□□ -0.5
PRKCSH-217ENST00000592741 FAM110AQ9BQ89 295 aa11.92□□□□□ -0.5
PRKCSH-217ENST00000592741 G3V4G9 280 aa11.92□□□□□ -0.5
PRKCSH-217ENST00000592741 TRAV4A0A0B4J268 109 aa11.91□□□□□ -0.5
PRKCSH-217ENST00000592741 TMEM238C9JI98 176 aa11.91□□□□□ -0.5
PRKCSH-217ENST00000592741 K7EQD1 137 aa11.91□□□□□ -0.5
PRKCSH-217ENST00000592741 NDUFA7O95182 113 aa11.91□□□□□ -0.5
PRKCSH-217ENST00000592741 Q6ZTI0 123 aa11.91□□□□□ -0.5
PRKCSH-217ENST00000592741 IGHV1-58A0A0C4DH39 117 aa11.9□□□□□ -0.5
PRKCSH-217ENST00000592741 TRBV10-1A0A0K0K1A3 114 aa11.9□□□□□ -0.5
PRKCSH-217ENST00000592741 RPL24P83731 157 aaKnown RBP11.9□□□□□ -0.5
PRKCSH-217ENST00000592741 RPL36AP83881 106 aaKnown RBP11.9□□□□□ -0.5
PRKCSH-217ENST00000592741 RPL36ALQ969Q0 106 aaKnown RBP11.9□□□□□ -0.5
PRKCSH-217ENST00000592741 CHD6Q8TD26 2715 aa11.9□□□□□ -0.5
PRKCSH-217ENST00000592741 PDZD2O15018 2839 aa11.9□□□□□ -0.5
PRKCSH-217ENST00000592741 CFC1BP0CG36 223 aa11.9□□□□□ -0.5
PRKCSH-217ENST00000592741 CFC1P0CG37 223 aa11.9□□□□□ -0.5
PRKCSH-217ENST00000592741 GAGE13Q4V321 117 aa11.9□□□□□ -0.5
PRKCSH-217ENST00000592741 LYRM7Q5U5X0 104 aa11.9□□□□□ -0.5
PRKCSH-217ENST00000592741 C10orf126Q8N4M7 172 aa11.9□□□□□ -0.5
PRKCSH-217ENST00000592741 ADARB2-AS1A8MUL3 147 aa11.89□□□□□ -0.51
PRKCSH-217ENST00000592741 DGAT2L7PQ6IED9 249 aa11.89□□□□□ -0.51
PRKCSH-217ENST00000592741 ANK3Q12955 4377 aaKnown RBP11.89□□□□□ -0.51
PRKCSH-217ENST00000592741 TRAV8-3A0A0A6YYJ7 113 aa11.89□□□□□ -0.51
PRKCSH-217ENST00000592741 A0A0J9YXY3 114 aa11.89□□□□□ -0.51
PRKCSH-217ENST00000592741 GIG44P09565 113 aaPredicted RBP11.89□□□□□ -0.51
PRKCSH-217ENST00000592741 C16orf74Q96GX8 76 aa11.89□□□□□ -0.51
PRKCSH-217ENST00000592741 WFDC10AQ9H1F0 79 aa11.89□□□□□ -0.51
PRKCSH-217ENST00000592741 GEMIN7Q9H840 131 aaKnown RBP11.89□□□□□ -0.51
PRKCSH-217ENST00000592741 CCDC168Q8NDH2 2452 aa11.88□□□□□ -0.51
PRKCSH-217ENST00000592741 LOC107984156A0A0G2JMH3 177 aa11.88□□□□□ -0.51
PRKCSH-217ENST00000592741 RPL35AP18077 110 aaKnown RBP11.88□□□□□ -0.51
PRKCSH-217ENST00000592741 PCP4P48539 62 aa11.88□□□□□ -0.51
PRKCSH-217ENST00000592741 DAZ2Q13117 558 aaKnown RBP11.88□□□□□ -0.51
PRKCSH-217ENST00000592741 WFDC2Q14508 124 aa11.88□□□□□ -0.51
PRKCSH-217ENST00000592741 ARL17AQ8IVW1 177 aa11.88□□□□□ -0.51
PRKCSH-217ENST00000592741 C1QTNF4Q9BXJ3 329 aa11.88□□□□□ -0.51
PRKCSH-217ENST00000592741 NOP10Q9NPE3 64 aaKnown RBP11.88□□□□□ -0.51
PRKCSH-217ENST00000592741 WNK1Q9H4A3 2382 aa11.88□□□□□ -0.51
PRKCSH-217ENST00000592741 DAZ4Q86SG3 579 aaKnown RBP11.87□□□□□ -0.51
PRKCSH-217ENST00000592741 VSIG2Q96IQ7 327 aa11.87□□□□□ -0.51
PRKCSH-217ENST00000592741 DAZ3Q9NR90 486 aaKnown RBP11.87□□□□□ -0.51
PRKCSH-217ENST00000592741 C19orf73Q9NVV2 129 aa11.87□□□□□ -0.51
PRKCSH-217ENST00000592741 TEX48A0A1B0GUV7 120 aa11.87□□□□□ -0.51
PRKCSH-217ENST00000592741 UBE2D3P61077 147 aa11.87□□□□□ -0.51
PRKCSH-217ENST00000592741 UBE2D2P62837 147 aa11.87□□□□□ -0.51
PRKCSH-217ENST00000592741 PRO1854Q9UHT4 67 aa11.87□□□□□ -0.51
PRKCSH-217ENST00000592741 A4D1N5 150 aa11.86□□□□□ -0.51
PRKCSH-217ENST00000592741 SPINK8P0C7L1 97 aa11.86□□□□□ -0.51
PRKCSH-217ENST00000592741 MUSTN1Q8IVN3 82 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms