RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 ZNF843Q8N446 348 aa4.32□□□□□ -1.72
RTTN-209ENST00000583043 IGKV3OR2-268A0A0C4DH90 116 aa4.31□□□□□ -1.72
RTTN-209ENST00000583043 RNASE8Q8TDE3 154 aaKnown RBP4.31□□□□□ -1.72
RTTN-209ENST00000583043 CHCHD7Q9BUK0 85 aa4.31□□□□□ -1.72
RTTN-209ENST00000583043 IGKV2D-26A0A0A0MRZ7 120 aa4.31□□□□□ -1.72
RTTN-209ENST00000583043 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.31□□□□□ -1.72
RTTN-209ENST00000583043 IGKV2-29A2NJV5 120 aaPredicted RBP4.31□□□□□ -1.72
RTTN-209ENST00000583043 COX7A2LO14548 114 aa4.31□□□□□ -1.72
RTTN-209ENST00000583043 TRAV8-3A0A0A6YYJ7 113 aa4.31□□□□□ -1.72
RTTN-209ENST00000583043 DEFB130BP0DP73 79 aa4.31□□□□□ -1.72
RTTN-209ENST00000583043 DEFB130AP0DP74 79 aa4.31□□□□□ -1.72
RTTN-209ENST00000583043 ARFGEF3Q5TH69 2177 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 UBE2D4Q9Y2X8 147 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 F8WDY8 70 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 PRB4P10163 310 aaPredicted RBP4.3□□□□□ -1.72
RTTN-209ENST00000583043 MIFP14174 115 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 GAGE6Q13070 117 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 AMTNQ6UX39 209 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 IGHV3-33P01772 117 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 HIST2H2BCQ6DN03 193 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 HIST2H2BDQ6DRA6 164 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 FAM240AA0A1B0GVK7 77 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 SPATA25Q9BR10 227 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 PTPRBP23467 1997 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 UBE2D3P61077 147 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 UBE2D2P62837 147 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 DEFB136Q30KP8 78 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 ORMDL1Q9P0S3 153 aa4.3□□□□□ -1.72
RTTN-209ENST00000583043 RBX1P62877 108 aa4.29□□□□□ -1.72
RTTN-209ENST00000583043 MAPKAPK5-AS1Q8N8E1 139 aa4.29□□□□□ -1.72
RTTN-209ENST00000583043 NTN5Q8WTR8 489 aaPredicted RBP4.29□□□□□ -1.72
RTTN-209ENST00000583043 IMUPQ9GZP8 106 aa4.29□□□□□ -1.72
RTTN-209ENST00000583043 SND1-IT1Q9HBX3 110 aa4.29□□□□□ -1.72
RTTN-209ENST00000583043 PCNX1Q96RV3 2341 aa4.29□□□□□ -1.72
RTTN-209ENST00000583043 HTN3P15516 51 aa4.29□□□□□ -1.72
RTTN-209ENST00000583043 CITED2Q99967 270 aaPredicted RBP4.29□□□□□ -1.72
RTTN-209ENST00000583043 TMEM126AQ9H061 195 aa4.29□□□□□ -1.72
RTTN-209ENST00000583043 KLK5Q9Y337 293 aaPredicted RBP4.29□□□□□ -1.72
RTTN-209ENST00000583043 SPTBN1Q01082 2364 aaKnown RBP4.29□□□□□ -1.72
RTTN-209ENST00000583043 IGHV3-38A0A0C4DH36 116 aa4.29□□□□□ -1.72
RTTN-209ENST00000583043 RAI1Q7Z5J4 1906 aaPredicted RBP4.29□□□□□ -1.72
RTTN-209ENST00000583043 ABCA1O95477 2261 aa4.29□□□□□ -1.72
RTTN-209ENST00000583043 IGLV4-69A0A075B6H9 119 aa4.29□□□□□ -1.72
RTTN-209ENST00000583043 COX17Q14061 63 aa4.29□□□□□ -1.72
RTTN-209ENST00000583043 MAPK1IP1LQ8NDC0 245 aa4.29□□□□□ -1.72
RTTN-209ENST00000583043 ZNF561-AS1K7EIQ3 104 aa4.29□□□□□ -1.72
RTTN-209ENST00000583043 ATP5EP2Q5VTU8 51 aa4.29□□□□□ -1.72
RTTN-209ENST00000583043 Q6ZUT4 128 aa4.29□□□□□ -1.72
RTTN-209ENST00000583043 IGLV1-51P01701 117 aa4.28□□□□□ -1.72
RTTN-209ENST00000583043 LINC00315P59091 139 aa4.28□□□□□ -1.72
RTTN-209ENST00000583043 C15orf53Q8NAA6 179 aa4.28□□□□□ -1.72
RTTN-209ENST00000583043 AVPP01185 164 aa4.28□□□□□ -1.72
RTTN-209ENST00000583043 GYPEP15421 78 aa4.28□□□□□ -1.72
RTTN-209ENST00000583043 TRBV6-8A0A0A6YYG3 113 aa4.28□□□□□ -1.72
RTTN-209ENST00000583043 F5H768 121 aa4.28□□□□□ -1.72
RTTN-209ENST00000583043 Q6Q795 121 aa4.28□□□□□ -1.72
RTTN-209ENST00000583043 UBL5Q9BZL1 73 aa4.28□□□□□ -1.72
RTTN-209ENST00000583043 BAALC-AS2P0C853 105 aa4.28□□□□□ -1.72
RTTN-209ENST00000583043 SMIM20Q8N5G0 67 aa4.28□□□□□ -1.72
RTTN-209ENST00000583043 TTTY13Q9BZ97 58 aa4.28□□□□□ -1.72
RTTN-209ENST00000583043 UTRNP46939 3433 aa4.28□□□□□ -1.72
RTTN-209ENST00000583043 CACNA1BQ00975 2339 aa4.28□□□□□ -1.73
RTTN-209ENST00000583043 WFDC2Q14508 124 aa4.28□□□□□ -1.73
RTTN-209ENST00000583043 LINC00308Q8TCZ7 52 aa4.28□□□□□ -1.73
RTTN-209ENST00000583043 PRR14LQ5THK1 2151 aa4.27□□□□□ -1.73
RTTN-209ENST00000583043 LINC00643Q86TS7 51 aa4.27□□□□□ -1.73
RTTN-209ENST00000583043 LINC01006Q8NI28 216 aa4.27□□□□□ -1.73
RTTN-209ENST00000583043 COL6A6A6NMZ7 2263 aa4.27□□□□□ -1.73
RTTN-209ENST00000583043 TCL1BO95988 128 aa4.27□□□□□ -1.73
RTTN-209ENST00000583043 FHL3Q13643 280 aa4.27□□□□□ -1.73
RTTN-209ENST00000583043 DAND5Q8N907 189 aa4.27□□□□□ -1.73
RTTN-209ENST00000583043 SPTBN2O15020 2390 aa4.27□□□□□ -1.73
RTTN-209ENST00000583043 IGLV5-45A0A087WSX0 123 aa4.26□□□□□ -1.73
RTTN-209ENST00000583043 LST1O00453 97 aa4.26□□□□□ -1.73
RTTN-209ENST00000583043 ODF3L2Q3SX64 289 aa4.26□□□□□ -1.73
RTTN-209ENST00000583043 CDKN2A-AS1Q9UH64 79 aa4.26□□□□□ -1.73
RTTN-209ENST00000583043 Q6ZTI0 123 aa4.26□□□□□ -1.73
RTTN-209ENST00000583043 OPRPNQ99935 248 aaPredicted RBP4.26□□□□□ -1.73
RTTN-209ENST00000583043 TMEM256-PLSCR3K7ERE1 68 aa4.26□□□□□ -1.73
RTTN-209ENST00000583043 ANGP03950 147 aaKnown RBP4.26□□□□□ -1.73
RTTN-209ENST00000583043 NAV3Q8IVL0 2385 aa4.26□□□□□ -1.73
RTTN-209ENST00000583043 CREBBPQ92793 2442 aa4.26□□□□□ -1.73
RTTN-209ENST00000583043 DEFB1P60022 68 aa4.26□□□□□ -1.73
RTTN-209ENST00000583043 CDC42SE2Q9NRR3 84 aa4.26□□□□□ -1.73
RTTN-209ENST00000583043 SRCAPQ6ZRS2 3230 aa4.26□□□□□ -1.73
RTTN-209ENST00000583043 A0A1B0GUV1 79 aa4.25□□□□□ -1.73
RTTN-209ENST00000583043 FAM19A3Q7Z5A8 133 aa4.25□□□□□ -1.73
RTTN-209ENST00000583043 Q8IZM0 81 aa4.25□□□□□ -1.73
RTTN-209ENST00000583043 GAGE2AQ6NT46 116 aa4.25□□□□□ -1.73
RTTN-209ENST00000583043 ATOX1O00244 68 aa4.25□□□□□ -1.73
RTTN-209ENST00000583043 CD164L2Q6UWJ8 174 aa4.25□□□□□ -1.73
RTTN-209ENST00000583043 TET2Q6N021 2002 aaPredicted RBP4.25□□□□□ -1.73
RTTN-209ENST00000583043 A0A0U1RRA0 63 aa4.25□□□□□ -1.73
RTTN-209ENST00000583043 GAS8-AS1O95177 125 aa4.24□□□□□ -1.73
RTTN-209ENST00000583043 PLA2G2AP14555 144 aa4.24□□□□□ -1.73
RTTN-209ENST00000583043 NRGNQ92686 78 aa4.24□□□□□ -1.73
RTTN-209ENST00000583043 LAMTOR3Q9UHA4 124 aa4.24□□□□□ -1.73
RTTN-209ENST00000583043 SPRY2O43597 315 aa4.24□□□□□ -1.73
RTTN-209ENST00000583043 CRLF1O75462 422 aa4.24□□□□□ -1.73
RTTN-209ENST00000583043 NPC2P61916 151 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms