RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 LYZL1Q6UWQ5 148 aa8.09□□□□□ -1.11
SENP3-204ENST00000580997 NUDT10Q8NFP7 164 aa8.09□□□□□ -1.11
SENP3-204ENST00000580997 CIRBP-AS1Q8TBR5 109 aa8.09□□□□□ -1.11
SENP3-204ENST00000580997 NUDT11Q96G61 164 aa8.09□□□□□ -1.11
SENP3-204ENST00000580997 A0A1B0GUV1 79 aa8.08□□□□□ -1.12
SENP3-204ENST00000580997 PRSS1P07477 247 aa8.08□□□□□ -1.12
SENP3-204ENST00000580997 MGPP08493 103 aa8.08□□□□□ -1.12
SENP3-204ENST00000580997 TRGC1P0CF51 173 aa8.08□□□□□ -1.12
SENP3-204ENST00000580997 CTRLP40313 264 aa8.08□□□□□ -1.12
SENP3-204ENST00000580997 KRTAP10-4P60372 401 aaPredicted RBP8.08□□□□□ -1.12
SENP3-204ENST00000580997 RASL11AQ6T310 242 aa8.08□□□□□ -1.12
SENP3-204ENST00000580997 DEFB104AQ8WTQ1 72 aa8.08□□□□□ -1.12
SENP3-204ENST00000580997 PGLYRP4Q96LB8 373 aa8.08□□□□□ -1.12
SENP3-204ENST00000580997 DPH3P1Q9H4G8 78 aa8.08□□□□□ -1.12
SENP3-204ENST00000580997 NIT2Q9NQR4 276 aa8.08□□□□□ -1.12
SENP3-204ENST00000580997 KRTAP29-1A8MX34 341 aaPredicted RBP8.07□□□□□ -1.12
SENP3-204ENST00000580997 NKX2-5P52952 324 aaPredicted RBP8.07□□□□□ -1.12
SENP3-204ENST00000580997 REG3AQ06141 175 aa8.07□□□□□ -1.12
SENP3-204ENST00000580997 C20orf203Q8NBC4 194 aa8.07□□□□□ -1.12
SENP3-204ENST00000580997 K7EN84 100 aa8.06□□□□□ -1.12
SENP3-204ENST00000580997 HLA-DQA1P01909 254 aa8.06□□□□□ -1.12
SENP3-204ENST00000580997 Q6ZNX1 250 aa8.06□□□□□ -1.12
SENP3-204ENST00000580997 C9orf163Q8N9P6 203 aa8.06□□□□□ -1.12
SENP3-204ENST00000580997 OCC1Q8TAD7 63 aa8.06□□□□□ -1.12
SENP3-204ENST00000580997 KRTAP9-8Q9BYQ0 159 aa8.06□□□□□ -1.12
SENP3-204ENST00000580997 TRAV8-4A0A0B4J246 113 aa8.05□□□□□ -1.12
SENP3-204ENST00000580997 CLPSL2Q6UWE3 100 aa8.05□□□□□ -1.12
SENP3-204ENST00000580997 CLRN3Q8NCR9 226 aa8.05□□□□□ -1.12
SENP3-204ENST00000580997 TMEM243Q9BU79 118 aa8.05□□□□□ -1.12
SENP3-204ENST00000580997 RNASE7Q9H1E1 156 aaKnown RBP8.05□□□□□ -1.12
SENP3-204ENST00000580997 RPP21Q9H633 154 aaKnown RBP8.05□□□□□ -1.12
SENP3-204ENST00000580997 LRP1Q07954 4544 aaKnown RBP8.04□□□□□ -1.12
SENP3-204ENST00000580997 IGLV4-60A0A075B6I1 120 aa8.04□□□□□ -1.12
SENP3-204ENST00000580997 TWIST1Q15672 202 aa8.04□□□□□ -1.12
SENP3-204ENST00000580997 LYPD6BQ8NI32 183 aa8.04□□□□□ -1.12
SENP3-204ENST00000580997 GTSF1Q8WW33 167 aa8.04□□□□□ -1.12
SENP3-204ENST00000580997 PKHD1L1Q86WI1 4243 aa8.03□□□□□ -1.12
SENP3-204ENST00000580997 TMEM250H0YL14 139 aa8.03□□□□□ -1.12
SENP3-204ENST00000580997 SDIM1Q6ZPB5 146 aa8.03□□□□□ -1.12
SENP3-204ENST00000580997 GATD1Q8NB37 220 aa8.03□□□□□ -1.12
SENP3-204ENST00000580997 GFRA4Q9GZZ7 299 aa8.03□□□□□ -1.12
SENP3-204ENST00000580997 IGLV10-54A0A075B6I4 117 aa8.02□□□□□ -1.13
SENP3-204ENST00000580997 FOXA3P55318 350 aaPredicted RBP8.02□□□□□ -1.13
SENP3-204ENST00000580997 CNBPP62633 177 aaKnown RBP8.02□□□□□ -1.13
SENP3-204ENST00000580997 BLOC1S1P78537 153 aa8.02□□□□□ -1.13
SENP3-204ENST00000580997 COTL1Q14019 142 aa8.02□□□□□ -1.13
SENP3-204ENST00000580997 FAM231DQ6ZW35 169 aa8.02□□□□□ -1.13
SENP3-204ENST00000580997 FAT3Q8TDW7 4589 aa8.02□□□□□ -1.13
SENP3-204ENST00000580997 AMTP48728 403 aa8.01□□□□□ -1.13
SENP3-204ENST00000580997 AKAP14Q86UN6 197 aa8.01□□□□□ -1.13
SENP3-204ENST00000580997 TRAV26-2A0A0B4J265 109 aa8□□□□□ -1.13
SENP3-204ENST00000580997 UBE2L6O14933 153 aa8□□□□□ -1.13
SENP3-204ENST00000580997 CIRBPQ14011 172 aaKnown RBP8□□□□□ -1.13
SENP3-204ENST00000580997 TEX261Q6UWH6 196 aa8□□□□□ -1.13
SENP3-204ENST00000580997 ALKAL2Q6UX46 152 aa8□□□□□ -1.13
SENP3-204ENST00000580997 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8□□□□□ -1.13
SENP3-204ENST00000580997 hDV102S1A0JD36 115 aa7.99□□□□□ -1.13
SENP3-204ENST00000580997 A8MWL6 223 aa7.99□□□□□ -1.13
SENP3-204ENST00000580997 H7C423 109 aa7.99□□□□□ -1.13
SENP3-204ENST00000580997 PANO1I0J062 215 aa7.99□□□□□ -1.13
SENP3-204ENST00000580997 NDUFS6O75380 124 aaKnown RBP7.99□□□□□ -1.13
SENP3-204ENST00000580997 NCR2O95944 276 aa7.99□□□□□ -1.13
SENP3-204ENST00000580997 SLPIP03973 132 aa7.99□□□□□ -1.13
SENP3-204ENST00000580997 CT83Q5H943 113 aa7.99□□□□□ -1.13
SENP3-204ENST00000580997 SMIM15Q7Z3B0 74 aa7.99□□□□□ -1.13
SENP3-204ENST00000580997 GATCO43716 136 aaKnown RBP7.98□□□□□ -1.13
SENP3-204ENST00000580997 OXTP01178 125 aa7.98□□□□□ -1.13
SENP3-204ENST00000580997 RPL39LQ96EH5 51 aaKnown RBP7.98□□□□□ -1.13
SENP3-204ENST00000580997 TRBV6-5A0A0K0K1A5 114 aa7.97□□□□□ -1.13
SENP3-204ENST00000580997 SDHAF1A6NFY7 115 aa7.97□□□□□ -1.13
SENP3-204ENST00000580997 IGHV3-64A0A075B6Q5 118 aa7.96□□□□□ -1.14
SENP3-204ENST00000580997 RPL37AP61513 92 aaKnown RBP7.96□□□□□ -1.14
SENP3-204ENST00000580997 C15orf56Q8N910 161 aa7.96□□□□□ -1.14
SENP3-204ENST00000580997 FAM210AQ96ND0 272 aa7.96□□□□□ -1.14
SENP3-204ENST00000580997 AP5S1Q9NUS5 200 aa7.96□□□□□ -1.14
SENP3-204ENST00000580997 HMCN2Q8NDA2 5059 aa7.96□□□□□ -1.14
SENP3-204ENST00000580997 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.95□□□□□ -1.14
SENP3-204ENST00000580997 FAM231BA6NCW3 169 aa7.95□□□□□ -1.14
SENP3-204ENST00000580997 GAGE12HA6NDE8 117 aa7.95□□□□□ -1.14
SENP3-204ENST00000580997 I3L3M4 83 aa7.95□□□□□ -1.14
SENP3-204ENST00000580997 LCE4AQ5TA78 99 aa7.95□□□□□ -1.14
SENP3-204ENST00000580997 CFAP161Q6P656 301 aa7.95□□□□□ -1.14
SENP3-204ENST00000580997 LINC01551Q86U37 167 aa7.95□□□□□ -1.14
SENP3-204ENST00000580997 TSKUQ8WUA8 353 aa7.95□□□□□ -1.14
SENP3-204ENST00000580997 hCG_2014768A0A024R1R8 64 aa7.94□□□□□ -1.14
SENP3-204ENST00000580997 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.94□□□□□ -1.14
SENP3-204ENST00000580997 IGKV2-29A2NJV5 120 aaPredicted RBP7.94□□□□□ -1.14
SENP3-204ENST00000580997 GAS8-AS1O95177 125 aa7.94□□□□□ -1.14
SENP3-204ENST00000580997 APCSP02743 223 aa7.94□□□□□ -1.14
SENP3-204ENST00000580997 FGF6P10767 208 aa7.94□□□□□ -1.14
SENP3-204ENST00000580997 ESDP10768 282 aa7.94□□□□□ -1.14
SENP3-204ENST00000580997 ZNF25P17030 456 aaPredicted RBP7.94□□□□□ -1.14
SENP3-204ENST00000580997 HNRNPA3P51991 378 aaKnown RBP7.94□□□□□ -1.14
SENP3-204ENST00000580997 AMMECR1LQ6DCA0 310 aa7.94□□□□□ -1.14
SENP3-204ENST00000580997 RNF185Q96GF1 192 aa7.94□□□□□ -1.14
SENP3-204ENST00000580997 SMIM7Q9BQ49 75 aa7.94□□□□□ -1.14
SENP3-204ENST00000580997 EIF5A2Q9GZV4 153 aaKnown RBP7.94□□□□□ -1.14
SENP3-204ENST00000580997 TMEM191AQ9H0A3 160 aa7.94□□□□□ -1.14
SENP3-204ENST00000580997 A0A1B0GUT8 65 aa7.93□□□□□ -1.14
SENP3-204ENST00000580997 HIGD1CA8MV81 97 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms