RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 VPS8Q8N3P4 1428 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 MRC1P22897 1456 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 NKTRP30414 1462 aaKnown RBP0.57□□□□□ -2.32
COPS3-213ENST00000577210 NRXN1Q9ULB1 1477 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 A0A096LNT2 108 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 A0A0G2JND7 137 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 TMEM218A2RU14 115 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 M0R143 59 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 SIX6O95475 246 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 PPP1R17O96001 155 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 APOC3P02656 99 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 NMBP08949 121 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 MRPS10P82664 201 aaKnown RBP0.57□□□□□ -2.32
COPS3-213ENST00000577210 PEA15Q15121 130 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 NCMAPQ5T1S8 102 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 C8orf59Q8N0T1 100 aaPredicted RBP0.57□□□□□ -2.32
COPS3-213ENST00000577210 SVBPQ8N300 66 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 ACBD7Q8N6N7 88 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 LCN9Q8WX39 176 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 PRR15LQ9BU68 103 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 SNHG12Q9BXW3 62 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 ERICH3Q5RHP9 1530 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 ZMYM4Q5VZL5 1548 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 NRKQ7Z2Y5 1582 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 ARFGEF1Q9Y6D6 1849 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 AHNAK2Q8IVF2 5795 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 KDM6BO15054 1643 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 CC2D2AQ9P2K1 1620 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 CCDC88BA6NC98 1476 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 GOLGA3Q08378 1498 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 LRRC9Q6ZRR7 1453 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 SIPA1L3O60292 1781 aaPredicted RBP0.56□□□□□ -2.32
COPS3-213ENST00000577210 ABCC3O15438 1527 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 PRDM15P57071 1507 aaPredicted RBP0.56□□□□□ -2.32
COPS3-213ENST00000577210 KDM5DQ9BY66 1539 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 GVQW2A0A096LPI5 108 aaPredicted RBP0.56□□□□□ -2.32
COPS3-213ENST00000577210 C20orf202A1L168 122 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 TNFP01375 233 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 DEFA5Q01523 94 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 TDRG1Q3Y452 100 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 COL5A1-AS1Q5SY13 56 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 GTF2H5Q6ZYL4 71 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 ZNF720Q7Z2F6 126 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 C5orf38Q86SI9 138 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 DEFB107AQ8IZN7 70 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 SMIM11BQ8TCY0 68 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 FAM103A1Q9BTL3 118 aaKnown RBP0.56□□□□□ -2.32
COPS3-213ENST00000577210 PRO1933Q9H354 126 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 SMCO4Q9NRQ5 59 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 V9GYH0 126 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 PLXNA1Q9UIW2 1896 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 SHROOM2Q13796 1616 aa0.56□□□□□ -2.32
COPS3-213ENST00000577210 ABCC5O15440 1437 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 NSD3Q9BZ95 1437 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 FANCAO15360 1455 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 PLEKHH2Q8IVE3 1493 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 MAGI1Q96QZ7 1491 aaPredicted RBP0.55□□□□□ -2.32
COPS3-213ENST00000577210 PRXQ9BXM0 1461 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 MRC2Q9UBG0 1479 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 MLH3Q9UHC1 1453 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 ESPL1Q14674 2120 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 MAP2P11137 1827 aaKnown RBP0.55□□□□□ -2.32
COPS3-213ENST00000577210 CDK13Q14004 1512 aaKnown RBP0.55□□□□□ -2.32
COPS3-213ENST00000577210 SSC5DA1L4H1 1573 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 THOC2Q8NI27 1593 aaKnown RBP0.55□□□□□ -2.32
COPS3-213ENST00000577210 TRAV30A0A087WSZ9 112 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 C7orf77A4D0Y5 90 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 FAM24AA6NFZ4 105 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 TMEM14DPA8MWL7 114 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 GCHFRP30047 84 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 CCL18P55774 89 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 ALKAL2Q6UX46 152 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 HEPN1Q6WQI6 88 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 COMMD6Q7Z4G1 85 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 S100A13Q99584 98 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 CACFD1Q9UGQ2 172 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 V9GYS6 101 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 IFT172Q9UG01 1749 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 ZNF609O15014 1411 aa0.55□□□□□ -2.32
COPS3-213ENST00000577210 PARP14Q460N5 1801 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 CCDC18Q5T9S5 1454 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 PXDNQ92626 1479 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 SPAG17Q6Q759 2223 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 NINQ8N4C6 2090 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 A0A0D9SFI3 127 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 CTXND1A0A1B0GTU2 59 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 UBE2L5PA0A1B0GUS4 154 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 SNRPGP15A8MWD9 76 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 H3BQ15 152 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 IGLC1P0CG04 106 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 UBE2L3P68036 154 aaKnown RBP0.54□□□□□ -2.32
COPS3-213ENST00000577210 SPAG11BQ08648 103 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 HMGN3Q15651 99 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 CFAP126Q5VTH2 177 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 SPAG11AQ6PDA7 123 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 BAGE3Q86Y29 109 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 MYOZ3Q8TDC0 251 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 WFDC6Q9BQY6 131 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 SPANXDQ9BXN6 97 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 NPVFQ9HCQ7 196 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms