RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	PHLDA3	Q9Y5J5	127 aa		4.21	□□□□□ -1.74
TCF4-233	ENST00000566376	TRBV7-3	A0A075B6L6	115 aa		4.2	□□□□□ -1.74
TCF4-233	ENST00000566376	TRAV8-6	A0A0B4J262	113 aa		4.2	□□□□□ -1.74
TCF4-233	ENST00000566376	TRBV10-1	A0A0K0K1A3	114 aa		4.2	□□□□□ -1.74
TCF4-233	ENST00000566376	CTRL	P40313	264 aa		4.2	□□□□□ -1.74
TCF4-233	ENST00000566376		Q8N976	141 aa		4.2	□□□□□ -1.74
TCF4-233	ENST00000566376	GTSF1	Q8WW33	167 aa		4.2	□□□□□ -1.74
TCF4-233	ENST00000566376	URB1-AS1	Q96HZ7	61 aa		4.2	□□□□□ -1.74
TCF4-233	ENST00000566376	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	IGLV5-52	A0A0A0MRZ9	124 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	TRBV6-8	A0A0A6YYG3	113 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	PANO1	I0J062	215 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376		M0QY20	66 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	PFDN1	O60925	122 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	GAS8-AS1	O95177	125 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	SCGB1D1	O95968	90 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	NKX2-5	P52952	324 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	RAB4B	P61018	213 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	ZNF56	Q15929	161 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	ALKAL2	Q6UX46	152 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	SLC51B	Q86UW2	128 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	PRR26	Q8N8Z3	221 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	BAALC	Q8WXS3	180 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	TMEM70	Q9BUB7	260 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	CNFN	Q9BYD5	112 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	KLK12	Q9UKR0	248 aa		4.19	□□□□□ -1.74
TCF4-233	ENST00000566376	TRAV9-2	A0A087WT02	112 aa		4.18	□□□□□ -1.74
TCF4-233	ENST00000566376	S100A9	P06702	114 aa	Known RBP	4.18	□□□□□ -1.74
TCF4-233	ENST00000566376	FOXA3	P55318	350 aa	Predicted RBP	4.18	□□□□□ -1.74
TCF4-233	ENST00000566376	SST	P61278	116 aa		4.18	□□□□□ -1.74
TCF4-233	ENST00000566376	SCX	Q7RTU7	201 aa		4.18	□□□□□ -1.74
TCF4-233	ENST00000566376		Q8N9P0	234 aa	Predicted RBP	4.18	□□□□□ -1.74
TCF4-233	ENST00000566376	FER1L6-AS1	Q8NA97	138 aa		4.18	□□□□□ -1.74
TCF4-233	ENST00000566376	C20orf203	Q8NBC4	194 aa		4.18	□□□□□ -1.74
TCF4-233	ENST00000566376	OR2D3	Q8NGH3	330 aa		4.18	□□□□□ -1.74
TCF4-233	ENST00000566376	DEFB104A	Q8WTQ1	72 aa		4.18	□□□□□ -1.74
TCF4-233	ENST00000566376	RNASE7	Q9H1E1	156 aa	Known RBP	4.18	□□□□□ -1.74
TCF4-233	ENST00000566376	PRR34	Q9NV39	138 aa		4.18	□□□□□ -1.74
TCF4-233	ENST00000566376	IGLV4-60	A0A075B6I1	120 aa		4.17	□□□□□ -1.74
TCF4-233	ENST00000566376		A0A087WWC5	75 aa		4.17	□□□□□ -1.74
TCF4-233	ENST00000566376	EPM2A	B3EWF7	344 aa		4.17	□□□□□ -1.74
TCF4-233	ENST00000566376		C9JQL5	133 aa		4.17	□□□□□ -1.74
TCF4-233	ENST00000566376	RAB5C	P51148	216 aa		4.17	□□□□□ -1.74
TCF4-233	ENST00000566376	RPL36A	P83881	106 aa	Known RBP	4.17	□□□□□ -1.74
TCF4-233	ENST00000566376	IQCJ	Q1A5X6	159 aa		4.17	□□□□□ -1.74
TCF4-233	ENST00000566376	CLPSL2	Q6UWE3	100 aa		4.17	□□□□□ -1.74
TCF4-233	ENST00000566376	LYZL1	Q6UWQ5	148 aa		4.17	□□□□□ -1.74
TCF4-233	ENST00000566376	OCC1	Q8TAD7	63 aa		4.17	□□□□□ -1.74
TCF4-233	ENST00000566376	UBE2W	Q96B02	151 aa		4.17	□□□□□ -1.74
TCF4-233	ENST00000566376	SMIM12	Q96EX1	92 aa		4.17	□□□□□ -1.74
TCF4-233	ENST00000566376	AP1S3	Q96PC3	154 aa		4.17	□□□□□ -1.74
TCF4-233	ENST00000566376	CHCHD7	Q9BUK0	85 aa		4.17	□□□□□ -1.74
TCF4-233	ENST00000566376	TRAV26-2	A0A0B4J265	109 aa		4.16	□□□□□ -1.74
TCF4-233	ENST00000566376	PSCA	O43653	123 aa		4.16	□□□□□ -1.74
TCF4-233	ENST00000566376	GNG4	P50150	75 aa		4.16	□□□□□ -1.74
TCF4-233	ENST00000566376	HNRNPA3	P51991	378 aa	Known RBP	4.16	□□□□□ -1.74
TCF4-233	ENST00000566376	RBX1	P62877	108 aa		4.16	□□□□□ -1.74
TCF4-233	ENST00000566376	EIF5A	P63241	154 aa	Known RBP	4.16	□□□□□ -1.74
TCF4-233	ENST00000566376	SPANXN1	Q5VSR9	72 aa		4.16	□□□□□ -1.74
TCF4-233	ENST00000566376	AKAP14	Q86UN6	197 aa		4.16	□□□□□ -1.74
TCF4-233	ENST00000566376	GATD1	Q8NB37	220 aa		4.16	□□□□□ -1.74
TCF4-233	ENST00000566376	RPL39L	Q96EH5	51 aa	Known RBP	4.16	□□□□□ -1.74
TCF4-233	ENST00000566376	UBR4	Q5T4S7	5183 aa		4.15	□□□□□ -1.74
TCF4-233	ENST00000566376	IGKV2D-24	A0A075B6R9	120 aa		4.15	□□□□□ -1.75
TCF4-233	ENST00000566376	TRAV8-3	A0A0A6YYJ7	113 aa		4.15	□□□□□ -1.75
TCF4-233	ENST00000566376	TEX46	H3BTG2	121 aa		4.15	□□□□□ -1.75
TCF4-233	ENST00000566376	PDE6D	O43924	150 aa		4.15	□□□□□ -1.75
TCF4-233	ENST00000566376	PRSS1	P07477	247 aa		4.15	□□□□□ -1.75
TCF4-233	ENST00000566376	MGP	P08493	103 aa		4.15	□□□□□ -1.75
TCF4-233	ENST00000566376	NTF3	P20783	257 aa		4.15	□□□□□ -1.75
TCF4-233	ENST00000566376	KRTAP5-9	P26371	169 aa		4.15	□□□□□ -1.75
TCF4-233	ENST00000566376	GAGE6	Q13070	117 aa		4.15	□□□□□ -1.75
TCF4-233	ENST00000566376	LCE1E	Q5T753	118 aa		4.15	□□□□□ -1.75
TCF4-233	ENST00000566376	C15orf54	Q8N8G6	183 aa		4.15	□□□□□ -1.75
TCF4-233	ENST00000566376	RPP21	Q9H633	154 aa	Known RBP	4.15	□□□□□ -1.75
TCF4-233	ENST00000566376	MED9	Q9NWA0	146 aa		4.15	□□□□□ -1.75
TCF4-233	ENST00000566376	TMEM250	H0YL14	139 aa		4.14	□□□□□ -1.75
TCF4-233	ENST00000566376		P01737	135 aa		4.14	□□□□□ -1.75
TCF4-233	ENST00000566376	SRP19	P09132	144 aa	Known RBP	4.14	□□□□□ -1.75
TCF4-233	ENST00000566376	INAFM2	P0DMQ5	153 aa		4.14	□□□□□ -1.75
TCF4-233	ENST00000566376	RPS10	P46783	165 aa	Known RBP	4.14	□□□□□ -1.75
TCF4-233	ENST00000566376	FAM231D	Q6ZW35	169 aa		4.14	□□□□□ -1.75
TCF4-233	ENST00000566376	LINC01551	Q86U37	167 aa		4.14	□□□□□ -1.75
TCF4-233	ENST00000566376	C15orf56	Q8N910	161 aa		4.14	□□□□□ -1.75
TCF4-233	ENST00000566376	CIRBP-AS1	Q8TBR5	109 aa		4.14	□□□□□ -1.75
TCF4-233	ENST00000566376	RNF185	Q96GF1	192 aa		4.14	□□□□□ -1.75
TCF4-233	ENST00000566376	PGLYRP4	Q96LB8	373 aa		4.14	□□□□□ -1.75
TCF4-233	ENST00000566376	TPPP3	Q9BW30	176 aa		4.14	□□□□□ -1.75
TCF4-233	ENST00000566376	DPH3P1	Q9H4G8	78 aa		4.14	□□□□□ -1.75
TCF4-233	ENST00000566376	IGLV10-54	A0A075B6I4	117 aa		4.13	□□□□□ -1.75
TCF4-233	ENST00000566376	IGKV2D-30	A0A075B6S6	120 aa		4.13	□□□□□ -1.75
TCF4-233	ENST00000566376		A0A087WX48	190 aa		4.13	□□□□□ -1.75
TCF4-233	ENST00000566376	hDV102S1	A0JD36	115 aa		4.13	□□□□□ -1.75
TCF4-233	ENST00000566376	FAM231B	A6NCW3	169 aa		4.13	□□□□□ -1.75
TCF4-233	ENST00000566376	IFNA1	P01562	189 aa		4.13	□□□□□ -1.75
TCF4-233	ENST00000566376	HLA-DQA1	P01909	254 aa		4.13	□□□□□ -1.75
TCF4-233	ENST00000566376	ANG	P03950	147 aa	Known RBP	4.13	□□□□□ -1.75
TCF4-233	ENST00000566376	RPS20	P60866	119 aa	Known RBP	4.13	□□□□□ -1.75
TCF4-233	ENST00000566376	CACNG7	P62955	275 aa		4.13	□□□□□ -1.75
TCF4-233	ENST00000566376	LCE1A	Q5T7P2	110 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms