RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 TRAV4A0A0B4J268 109 aa7.89□□□□□ -1.15
USB1-212ENST00000566082 IGHV1-58A0A0C4DH39 117 aa7.89□□□□□ -1.15
USB1-212ENST00000566082 A8MZ25 164 aa7.89□□□□□ -1.15
USB1-212ENST00000566082 IGHG2P01859 326 aa7.89□□□□□ -1.15
USB1-212ENST00000566082 A0A0B4J2C4 111 aa7.89□□□□□ -1.15
USB1-212ENST00000566082 A0A0J9YX75 114 aa7.89□□□□□ -1.15
USB1-212ENST00000566082 LGALS9O00182 355 aa7.89□□□□□ -1.15
USB1-212ENST00000566082 DEFB112Q30KQ8 113 aa7.89□□□□□ -1.15
USB1-212ENST00000566082 SPANXA1Q9NS26 97 aa7.89□□□□□ -1.15
USB1-212ENST00000566082 U3KQE9 123 aa7.89□□□□□ -1.15
USB1-212ENST00000566082 TMEM223A0PJW6 202 aa7.88□□□□□ -1.15
USB1-212ENST00000566082 LINC01619G3V211 115 aa7.88□□□□□ -1.15
USB1-212ENST00000566082 RPL35AP18077 110 aaKnown RBP7.88□□□□□ -1.15
USB1-212ENST00000566082 HERVK_113P63121 156 aa7.88□□□□□ -1.15
USB1-212ENST00000566082 APRG1Q8IVJ8 170 aa7.88□□□□□ -1.15
USB1-212ENST00000566082 TMEM86BQ8N661 226 aa7.88□□□□□ -1.15
USB1-212ENST00000566082 MGAQ8IWI9 3026 aa7.88□□□□□ -1.15
USB1-212ENST00000566082 IGLV4-3A0A075B6K6 122 aa7.88□□□□□ -1.15
USB1-212ENST00000566082 H3BT86 120 aa7.88□□□□□ -1.15
USB1-212ENST00000566082 POLR2KP53803 58 aaKnown RBP7.88□□□□□ -1.15
USB1-212ENST00000566082 ABCA2Q9BZC7 2435 aa7.88□□□□□ -1.15
USB1-212ENST00000566082 CRIP2P52943 208 aaPredicted RBP7.88□□□□□ -1.15
USB1-212ENST00000566082 TSPEAR-AS2P59090 65 aa7.88□□□□□ -1.15
USB1-212ENST00000566082 CDSNQ15517 529 aa7.88□□□□□ -1.15
USB1-212ENST00000566082 SPTBN4Q9H254 2564 aa7.88□□□□□ -1.15
USB1-212ENST00000566082 M0QY20 66 aa7.87□□□□□ -1.15
USB1-212ENST00000566082 PSMG3-AS1Q96PY0 264 aa7.87□□□□□ -1.15
USB1-212ENST00000566082 TRBV27A0A0K0K1C4 114 aa7.87□□□□□ -1.15
USB1-212ENST00000566082 IGHV4-30-2A0A087WSY4 118 aa7.87□□□□□ -1.15
USB1-212ENST00000566082 IGIPA6NJ69 53 aa7.87□□□□□ -1.15
USB1-212ENST00000566082 PROK1P58294 105 aa7.87□□□□□ -1.15
USB1-212ENST00000566082 CFAP161Q6P656 301 aa7.87□□□□□ -1.15
USB1-212ENST00000566082 SLURP1P55000 103 aa7.86□□□□□ -1.15
USB1-212ENST00000566082 TINCRA0A1B0GVN0 87 aa7.86□□□□□ -1.15
USB1-212ENST00000566082 K7EMT4 169 aa7.86□□□□□ -1.15
USB1-212ENST00000566082 IGHV4OR15-8A0A075B7B6 117 aa7.86□□□□□ -1.15
USB1-212ENST00000566082 A0A087WW49 117 aa7.86□□□□□ -1.15
USB1-212ENST00000566082 MIAQ16674 131 aa7.86□□□□□ -1.15
USB1-212ENST00000566082 CDKN2A-AS1Q9UH64 79 aa7.86□□□□□ -1.15
USB1-212ENST00000566082 UBE2D3P61077 147 aa7.85□□□□□ -1.15
USB1-212ENST00000566082 UBE2D2P62837 147 aa7.85□□□□□ -1.15
USB1-212ENST00000566082 IGLV4-69A0A075B6H9 119 aa7.85□□□□□ -1.15
USB1-212ENST00000566082 RNF223E7ERA6 249 aa7.85□□□□□ -1.15
USB1-212ENST00000566082 NXPH4O95158 308 aa7.85□□□□□ -1.15
USB1-212ENST00000566082 DEFB130BP0DP73 79 aa7.85□□□□□ -1.15
USB1-212ENST00000566082 DEFB130AP0DP74 79 aa7.85□□□□□ -1.15
USB1-212ENST00000566082 GPHB5Q86YW7 130 aa7.85□□□□□ -1.15
USB1-212ENST00000566082 VSIG2Q96IQ7 327 aa7.85□□□□□ -1.15
USB1-212ENST00000566082 TMEM243Q9BU79 118 aa7.85□□□□□ -1.15
USB1-212ENST00000566082 MALP21145 153 aa7.84□□□□□ -1.15
USB1-212ENST00000566082 NSUN5P1Q3KNT7 163 aa7.84□□□□□ -1.15
USB1-212ENST00000566082 LINC01356Q8N9X3 169 aa7.84□□□□□ -1.15
USB1-212ENST00000566082 ZNF580Q9UK33 172 aa7.84□□□□□ -1.15
USB1-212ENST00000566082 PRM2P04554 102 aa7.84□□□□□ -1.15
USB1-212ENST00000566082 HTN3P15516 51 aa7.84□□□□□ -1.15
USB1-212ENST00000566082 EDN2P20800 178 aa7.84□□□□□ -1.15
USB1-212ENST00000566082 C10orf99Q6UWK7 81 aa7.84□□□□□ -1.15
USB1-212ENST00000566082 CDIP1Q9H305 208 aa7.84□□□□□ -1.15
USB1-212ENST00000566082 C11orf71Q6IPW1 123 aa7.83□□□□□ -1.16
USB1-212ENST00000566082 FN1P02751 2386 aaKnown RBP7.83□□□□□ -1.16
USB1-212ENST00000566082 CCDC179H3BU77 68 aa7.83□□□□□ -1.16
USB1-212ENST00000566082 SOCS3O14543 225 aa7.83□□□□□ -1.16
USB1-212ENST00000566082 TSHBP01222 138 aa7.83□□□□□ -1.16
USB1-212ENST00000566082 ELANEP08246 267 aa7.83□□□□□ -1.16
USB1-212ENST00000566082 SMCPP49901 116 aaPredicted RBP7.83□□□□□ -1.16
USB1-212ENST00000566082 HERV-K104P63124 156 aa7.83□□□□□ -1.16
USB1-212ENST00000566082 S100A7L2Q5SY68 101 aa7.83□□□□□ -1.16
USB1-212ENST00000566082 Q9HAA7 133 aa7.83□□□□□ -1.16
USB1-212ENST00000566082 TRAV13-2A0A0B4J235 113 aa7.83□□□□□ -1.16
USB1-212ENST00000566082 IGKV3D-7A0A0C4DH55 119 aa7.83□□□□□ -1.16
USB1-212ENST00000566082 ACYP1P07311 99 aa7.82□□□□□ -1.16
USB1-212ENST00000566082 Q6ZSV7 163 aa7.82□□□□□ -1.16
USB1-212ENST00000566082 TMEM263Q8WUH6 116 aaKnown RBP7.82□□□□□ -1.16
USB1-212ENST00000566082 NRGNQ92686 78 aa7.82□□□□□ -1.16
USB1-212ENST00000566082 OVOL2Q9BRP0 275 aa7.82□□□□□ -1.16
USB1-212ENST00000566082 PRO0461Q9UI25 63 aa7.82□□□□□ -1.16
USB1-212ENST00000566082 PRRC2AP48634 2157 aaKnown RBP7.82□□□□□ -1.16
USB1-212ENST00000566082 COL12A1Q99715 3063 aa7.82□□□□□ -1.16
USB1-212ENST00000566082 TRBV30A0A0K0K1B3 111 aa7.82□□□□□ -1.16
USB1-212ENST00000566082 A6NDX4 124 aa7.82□□□□□ -1.16
USB1-212ENST00000566082 KLLNB2CW77 178 aa7.82□□□□□ -1.16
USB1-212ENST00000566082 CRYGDP07320 174 aa7.82□□□□□ -1.16
USB1-212ENST00000566082 C5orf38Q86SI9 138 aa7.82□□□□□ -1.16
USB1-212ENST00000566082 LINC00467Q9BRT7 94 aa7.82□□□□□ -1.16
USB1-212ENST00000566082 TRBV6-5A0A0K0K1A5 114 aa7.82□□□□□ -1.16
USB1-212ENST00000566082 SND1-IT1Q9HBX3 110 aa7.82□□□□□ -1.16
USB1-212ENST00000566082 ATMQ13315 3056 aa7.81□□□□□ -1.16
USB1-212ENST00000566082 NOP10Q9NPE3 64 aaKnown RBP7.81□□□□□ -1.16
USB1-212ENST00000566082 LAMTOR3Q9UHA4 124 aa7.81□□□□□ -1.16
USB1-212ENST00000566082 POLQO75417 2590 aa7.81□□□□□ -1.16
USB1-212ENST00000566082 PIEZO1Q92508 2521 aa7.81□□□□□ -1.16
USB1-212ENST00000566082 K7EQG2 157 aa7.81□□□□□ -1.16
USB1-212ENST00000566082 DSCR9P59020 149 aa7.81□□□□□ -1.16
USB1-212ENST00000566082 TMEM61Q8N0U2 210 aa7.81□□□□□ -1.16
USB1-212ENST00000566082 GATA3P23771 443 aa7.81□□□□□ -1.16
USB1-212ENST00000566082 CLPSL2Q6UWE3 100 aa7.81□□□□□ -1.16
USB1-212ENST00000566082 C10orf105Q8TEF2 133 aa7.81□□□□□ -1.16
USB1-212ENST00000566082 RPL32P62910 135 aaKnown RBP7.8□□□□□ -1.16
USB1-212ENST00000566082 PF4P02776 101 aa7.8□□□□□ -1.16
USB1-212ENST00000566082 NBL1P41271 181 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms