RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 SMDT1Q9H4I9 107 aa5.5□□□□□ -1.53
CAPN3-213ENST00000565173 TRBV25-1A0A075B6N4 114 aa5.49□□□□□ -1.53
CAPN3-213ENST00000565173 C19orf71A6NCJ1 209 aa5.49□□□□□ -1.53
CAPN3-213ENST00000565173 SLPIP03973 132 aa5.49□□□□□ -1.53
CAPN3-213ENST00000565173 IGLC6P0CF74 106 aa5.49□□□□□ -1.53
CAPN3-213ENST00000565173 GZMBP10144 247 aa5.49□□□□□ -1.53
CAPN3-213ENST00000565173 CIRBPQ14011 172 aaKnown RBP5.49□□□□□ -1.53
CAPN3-213ENST00000565173 FAM74A3Q4VXF1 159 aa5.49□□□□□ -1.53
CAPN3-213ENST00000565173 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-213ENST00000565173 CLRN3Q8NCR9 226 aa5.49□□□□□ -1.53
CAPN3-213ENST00000565173 NUDT10Q8NFP7 164 aa5.49□□□□□ -1.53
CAPN3-213ENST00000565173 NUDT11Q96G61 164 aa5.49□□□□□ -1.53
CAPN3-213ENST00000565173 RNASE7Q9H1E1 156 aaKnown RBP5.49□□□□□ -1.53
CAPN3-213ENST00000565173 IGLV4-60A0A075B6I1 120 aa5.48□□□□□ -1.53
CAPN3-213ENST00000565173 IGLV10-54A0A075B6I4 117 aa5.48□□□□□ -1.53
CAPN3-213ENST00000565173 IGHV1-24A0A0C4DH33 117 aa5.48□□□□□ -1.53
CAPN3-213ENST00000565173 XKRY2A2RUG3 117 aa5.48□□□□□ -1.53
CAPN3-213ENST00000565173 SMIM17P0DL12 118 aa5.48□□□□□ -1.53
CAPN3-213ENST00000565173 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
CAPN3-213ENST00000565173 RPS20P60866 119 aaKnown RBP5.48□□□□□ -1.53
CAPN3-213ENST00000565173 CNBPP62633 177 aaKnown RBP5.48□□□□□ -1.53
CAPN3-213ENST00000565173 REG3AQ06141 175 aa5.48□□□□□ -1.53
CAPN3-213ENST00000565173 TMEM241Q24JQ0 296 aa5.48□□□□□ -1.53
CAPN3-213ENST00000565173 LINC01551Q86U37 167 aa5.48□□□□□ -1.53
CAPN3-213ENST00000565173 AP1S3Q96PC3 154 aa5.48□□□□□ -1.53
CAPN3-213ENST00000565173 TPPP3Q9BW30 176 aa5.48□□□□□ -1.53
CAPN3-213ENST00000565173 GFRA4Q9GZZ7 299 aa5.48□□□□□ -1.53
CAPN3-213ENST00000565173 RPP21Q9H633 154 aaKnown RBP5.48□□□□□ -1.53
CAPN3-213ENST00000565173 A0A1B0GUV1 79 aa5.47□□□□□ -1.53
CAPN3-213ENST00000565173 GATCO43716 136 aaKnown RBP5.47□□□□□ -1.53
CAPN3-213ENST00000565173 ADIRFQ15847 76 aa5.47□□□□□ -1.53
CAPN3-213ENST00000565173 SUMO4Q6EEV6 95 aa5.47□□□□□ -1.53
CAPN3-213ENST00000565173 FER1L6-AS1Q8NA97 138 aa5.47□□□□□ -1.53
CAPN3-213ENST00000565173 NAT8Q9UHE5 227 aa5.47□□□□□ -1.53
CAPN3-213ENST00000565173 TRAV8-4A0A0B4J246 113 aa5.46□□□□□ -1.54
CAPN3-213ENST00000565173 H7C1H1 209 aa5.46□□□□□ -1.54
CAPN3-213ENST00000565173 MGPP08493 103 aa5.46□□□□□ -1.54
CAPN3-213ENST00000565173 RPL23P62829 140 aaKnown RBP5.46□□□□□ -1.54
CAPN3-213ENST00000565173 CACNG7P62955 275 aa5.46□□□□□ -1.54
CAPN3-213ENST00000565173 FAM231DQ6ZW35 169 aa5.46□□□□□ -1.54
CAPN3-213ENST00000565173 COMMD7Q86VX2 200 aa5.46□□□□□ -1.54
CAPN3-213ENST00000565173 PLA2G2DQ9UNK4 145 aa5.46□□□□□ -1.54
CAPN3-213ENST00000565173 hDV102S1A0JD36 115 aa5.45□□□□□ -1.54
CAPN3-213ENST00000565173 F2Z2F3 143 aa5.45□□□□□ -1.54
CAPN3-213ENST00000565173 RASL11AQ6T310 242 aa5.45□□□□□ -1.54
CAPN3-213ENST00000565173 UQCC3Q6UW78 93 aa5.45□□□□□ -1.54
CAPN3-213ENST00000565173 LYZL1Q6UWQ5 148 aa5.45□□□□□ -1.54
CAPN3-213ENST00000565173 ISOC2Q96AB3 205 aa5.45□□□□□ -1.54
CAPN3-213ENST00000565173 PGLYRP4Q96LB8 373 aa5.45□□□□□ -1.54
CAPN3-213ENST00000565173 TMEM243Q9BU79 118 aa5.45□□□□□ -1.54
CAPN3-213ENST00000565173 NIT2Q9NQR4 276 aa5.45□□□□□ -1.54
CAPN3-213ENST00000565173 OSTCQ9NRP0 149 aa5.45□□□□□ -1.54
CAPN3-213ENST00000565173 A0A087WYN8 130 aa5.44□□□□□ -1.54
CAPN3-213ENST00000565173 LINC00862A6NCI5 91 aa5.44□□□□□ -1.54
CAPN3-213ENST00000565173 A8MWL6 223 aa5.44□□□□□ -1.54
CAPN3-213ENST00000565173 CHTF8P0CG12 524 aa5.44□□□□□ -1.54
CAPN3-213ENST00000565173 NTF3P20783 257 aa5.44□□□□□ -1.54
CAPN3-213ENST00000565173 CT83Q5H943 113 aa5.44□□□□□ -1.54
CAPN3-213ENST00000565173 Q6ZRU5 148 aa5.44□□□□□ -1.54
CAPN3-213ENST00000565173 IGHV3-64A0A075B6Q5 118 aa5.43□□□□□ -1.54
CAPN3-213ENST00000565173 TMEM218A2RU14 115 aa5.43□□□□□ -1.54
CAPN3-213ENST00000565173 CTRLP40313 264 aa5.43□□□□□ -1.54
CAPN3-213ENST00000565173 WDR73Q6P4I2 378 aa5.43□□□□□ -1.54
CAPN3-213ENST00000565173 C15orf56Q8N910 161 aa5.43□□□□□ -1.54
CAPN3-213ENST00000565173 SPACA4Q8TDM5 124 aa5.43□□□□□ -1.54
CAPN3-213ENST00000565173 GTSF1Q8WW33 167 aa5.43□□□□□ -1.54
CAPN3-213ENST00000565173 RNF185Q96GF1 192 aa5.43□□□□□ -1.54
CAPN3-213ENST00000565173 CNFNQ9BYD5 112 aa5.43□□□□□ -1.54
CAPN3-213ENST00000565173 DPH3P1Q9H4G8 78 aa5.43□□□□□ -1.54
CAPN3-213ENST00000565173 V9GYV3 84 aa5.43□□□□□ -1.54
CAPN3-213ENST00000565173 F8W036 122 aa5.42□□□□□ -1.54
CAPN3-213ENST00000565173 TRGC1P0CF51 173 aa5.42□□□□□ -1.54
CAPN3-213ENST00000565173 PNRC1Q12796 327 aaPredicted RBP5.42□□□□□ -1.54
CAPN3-213ENST00000565173 TWIST1Q15672 202 aa5.42□□□□□ -1.54
CAPN3-213ENST00000565173 GATD1Q8NB37 220 aa5.42□□□□□ -1.54
CAPN3-213ENST00000565173 TSKUQ8WUA8 353 aa5.42□□□□□ -1.54
CAPN3-213ENST00000565173 BORCS7Q96B45 105 aa5.42□□□□□ -1.54
CAPN3-213ENST00000565173 AP5S1Q9NUS5 200 aa5.42□□□□□ -1.54
CAPN3-213ENST00000565173 PLAC8Q9NZF1 115 aa5.42□□□□□ -1.54
CAPN3-213ENST00000565173 RNF213Q63HN8 5207 aa5.42□□□□□ -1.54
CAPN3-213ENST00000565173 LRP2P98164 4655 aa5.41□□□□□ -1.54
CAPN3-213ENST00000565173 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.41□□□□□ -1.54
CAPN3-213ENST00000565173 GAGE12HA6NDE8 117 aa5.41□□□□□ -1.54
CAPN3-213ENST00000565173 HIGD1CA8MV81 97 aa5.41□□□□□ -1.54
CAPN3-213ENST00000565173 UBE2L6O14933 153 aa5.41□□□□□ -1.54
CAPN3-213ENST00000565173 ADCYAP1P18509 176 aa5.41□□□□□ -1.54
CAPN3-213ENST00000565173 AMTP48728 403 aa5.41□□□□□ -1.54
CAPN3-213ENST00000565173 COTL1Q14019 142 aa5.41□□□□□ -1.54
CAPN3-213ENST00000565173 DPH3Q96FX2 82 aa5.41□□□□□ -1.54
CAPN3-213ENST00000565173 TRAV26-2A0A0B4J265 109 aa5.4□□□□□ -1.54
CAPN3-213ENST00000565173 FAM231BA6NCW3 169 aa5.4□□□□□ -1.54
CAPN3-213ENST00000565173 PHOX2AO14813 284 aa5.4□□□□□ -1.54
CAPN3-213ENST00000565173 PPP1R2P9O14990 202 aa5.4□□□□□ -1.54
CAPN3-213ENST00000565173 MT-ND4LP03901 98 aa5.4□□□□□ -1.54
CAPN3-213ENST00000565173 RPS10P46783 165 aaKnown RBP5.4□□□□□ -1.54
CAPN3-213ENST00000565173 FOXA3P55318 350 aaPredicted RBP5.4□□□□□ -1.54
CAPN3-213ENST00000565173 COX6A2Q02221 97 aa5.4□□□□□ -1.54
CAPN3-213ENST00000565173 SMIM15Q7Z3B0 74 aa5.4□□□□□ -1.54
CAPN3-213ENST00000565173 PRSS3P2Q8NHM4 247 aa5.4□□□□□ -1.54
CAPN3-213ENST00000565173 NAT8BQ9UHF3 227 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms