RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 OVOS2Q6IE36 1432 aa-0.3□□□□□ -2.46
CHD9-207ENST00000562806 CDK5RAP2Q96SN8 1893 aa-0.31□□□□□ -2.46
CHD9-207ENST00000562806 PKHD1P08F94 4074 aa-0.31□□□□□ -2.46
CHD9-207ENST00000562806 CELSR3Q9NYQ7 3312 aa-0.31□□□□□ -2.46
CHD9-207ENST00000562806 SPTBN4Q9H254 2564 aa-0.31□□□□□ -2.46
CHD9-207ENST00000562806 CHD8Q9HCK8 2581 aa-0.31□□□□□ -2.46
CHD9-207ENST00000562806 ANK3Q12955 4377 aaKnown RBP-0.31□□□□□ -2.46
CHD9-207ENST00000562806 TRAV1-2A0A0B4J238 106 aa-0.31□□□□□ -2.46
CHD9-207ENST00000562806 PIN1P1O15428 100 aa-0.31□□□□□ -2.46
CHD9-207ENST00000562806 SPINK8P0C7L1 97 aa-0.31□□□□□ -2.46
CHD9-207ENST00000562806 LINC00694P0DN24 101 aa-0.31□□□□□ -2.46
CHD9-207ENST00000562806 RPRMQ9NS64 109 aa-0.31□□□□□ -2.46
CHD9-207ENST00000562806 PRO0255Q9UI72 69 aa-0.31□□□□□ -2.46
CHD9-207ENST00000562806 COL6A5A8TX70 2615 aa-0.31□□□□□ -2.46
CHD9-207ENST00000562806 PPRC1Q5VV67 1664 aaKnown RBP-0.31□□□□□ -2.46
CHD9-207ENST00000562806 PTPN13Q12923 2485 aa-0.31□□□□□ -2.46
CHD9-207ENST00000562806 ANKRD30AQ9BXX3 1397 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 PRDM2Q13029 1718 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 DNAH3Q8TD57 4116 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 LAMA1P25391 3075 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 DYNC1H1Q14204 4646 aaKnown RBP-0.32□□□□□ -2.46
CHD9-207ENST00000562806 TRBV10-3A0A0K0K1G6 114 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 A6NIN4 97 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 M0R3E3 92 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 ARPC5O15511 151 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 IFNA17P01571 189 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 PRM1P04553 51 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 TSPAN19P0C672 248 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 SCGB1A1P11684 91 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 SPRR2DP22532 72 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 UBE2G1P62253 170 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 WFDC2Q14508 124 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 C9orf116Q5BN46 136 aaPredicted RBP-0.32□□□□□ -2.46
CHD9-207ENST00000562806 Q5VV11 94 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 RPL7L1Q6DKI1 246 aaKnown RBP-0.32□□□□□ -2.46
CHD9-207ENST00000562806 Q6ZUT4 128 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 APOBP04114 4563 aaKnown RBP-0.32□□□□□ -2.46
CHD9-207ENST00000562806 TEX15Q9BXT5 2789 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 LRRC37A3O60309 1634 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 USP9XQ93008 2570 aaPredicted RBP-0.32□□□□□ -2.46
CHD9-207ENST00000562806 PKHD1L1Q86WI1 4243 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 FASNP49327 2511 aaKnown RBP-0.32□□□□□ -2.46
CHD9-207ENST00000562806 ARHGEF10O15013 1369 aa-0.32□□□□□ -2.46
CHD9-207ENST00000562806 PRKDCP78527 4128 aaKnown RBP-0.32□□□□□ -2.46
CHD9-207ENST00000562806 NIPBLQ6KC79 2804 aaeCLIP-0.32□□□□□ -2.46
CHD9-207ENST00000562806 CEP152O94986 1710 aa-0.33□□□□□ -2.46
CHD9-207ENST00000562806 SMIM6P0DI80 62 aa-0.33□□□□□ -2.46
CHD9-207ENST00000562806 PI4KAP42356 2102 aa-0.33□□□□□ -2.46
CHD9-207ENST00000562806 CKS1BP61024 79 aa-0.33□□□□□ -2.46
CHD9-207ENST00000562806 DEFB109BQ30KR1 87 aa-0.33□□□□□ -2.46
CHD9-207ENST00000562806 SMIM3Q9BZL3 60 aa-0.33□□□□□ -2.46
CHD9-207ENST00000562806 CUBNO60494 3623 aa-0.33□□□□□ -2.46
CHD9-207ENST00000562806 DISP2A7MBM2 1401 aa-0.33□□□□□ -2.46
CHD9-207ENST00000562806 MYH6P13533 1939 aa-0.33□□□□□ -2.46
CHD9-207ENST00000562806 ITPR2Q14571 2701 aa-0.33□□□□□ -2.46
CHD9-207ENST00000562806 NWD2Q9ULI1 1742 aa-0.33□□□□□ -2.46
CHD9-207ENST00000562806 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.33□□□□□ -2.46
CHD9-207ENST00000562806 TMEM2Q9UHN6 1383 aa-0.33□□□□□ -2.46
CHD9-207ENST00000562806 TNRC18O15417 2968 aaPredicted RBP-0.33□□□□□ -2.46
CHD9-207ENST00000562806 LRP6O75581 1613 aa-0.34□□□□□ -2.46
CHD9-207ENST00000562806 AKAP9Q99996 3911 aa-0.34□□□□□ -2.46
CHD9-207ENST00000562806 CNOT1A5YKK6 2376 aaKnown RBP-0.34□□□□□ -2.46
CHD9-207ENST00000562806 DAPK1P53355 1430 aa-0.34□□□□□ -2.46
CHD9-207ENST00000562806 AKAP14Q86UN6 197 aa-0.34□□□□□ -2.46
CHD9-207ENST00000562806 CTAGE3PQ8IX95 158 aa-0.34□□□□□ -2.46
CHD9-207ENST00000562806 SPTSSBQ8NFR3 76 aa-0.34□□□□□ -2.46
CHD9-207ENST00000562806 CASKIN1Q8WXD9 1431 aa-0.34□□□□□ -2.46
CHD9-207ENST00000562806 SACSQ9NZJ4 4579 aa-0.34□□□□□ -2.46
CHD9-207ENST00000562806 NBEAL2Q6ZNJ1 2754 aa-0.34□□□□□ -2.46
CHD9-207ENST00000562806 AKAP6Q13023 2319 aa-0.35□□□□□ -2.46
CHD9-207ENST00000562806 SRCAPQ6ZRS2 3230 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 MYH9P35579 1960 aaKnown RBP-0.35□□□□□ -2.47
CHD9-207ENST00000562806 FHAD1B1AJZ9 1412 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 SPTBN2O15020 2390 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 LAMA3Q16787 3333 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 PLXNB2O15031 1838 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 ZNF236Q9UL36 1845 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 J3QR89 54 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 APOC4-APOC2K7ER74 178 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 NCR2O95944 276 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 IL5P05113 134 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 CCL18P55774 89 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 RRAS2P62070 204 aaPredicted RBP-0.35□□□□□ -2.47
CHD9-207ENST00000562806 S100A7L2Q5SY68 101 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 Q5VSD8 79 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 CFAP126Q5VTH2 177 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 ZNF818PQ6ZRF7 136 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 GSKIPQ9P0R6 139 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 LINC00312Q9Y6C7 94 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 PCNX1Q96RV3 2341 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 KDM3BQ7LBC6 1761 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 A0A0C4DFX4 3053 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 NBEAQ8NFP9 2946 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 DNAH9Q9NYC9 4486 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 MGAM2Q2M2H8 2515 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 DNAH1Q9P2D7 4330 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 UTP20O75691 2785 aaKnown RBP-0.35□□□□□ -2.47
CHD9-207ENST00000562806 MRC1P22897 1456 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 PXDNQ92626 1479 aa-0.35□□□□□ -2.47
CHD9-207ENST00000562806 HTTP42858 3142 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms