RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 LY6EQ16553 131 aa10.45□□□□□ -0.74
GTF3C1-203ENST00000562609 TIMM17AQ99595 171 aa10.45□□□□□ -0.74
GTF3C1-203ENST00000562609 OPRPNQ99935 248 aaPredicted RBP10.45□□□□□ -0.74
GTF3C1-203ENST00000562609 SPANXDQ9BXN6 97 aa10.45□□□□□ -0.74
GTF3C1-203ENST00000562609 UBR5O95071 2799 aaPredicted RBP10.45□□□□□ -0.74
GTF3C1-203ENST00000562609 ATP5G1P05496 136 aa10.44□□□□□ -0.74
GTF3C1-203ENST00000562609 MAPK1IP1LQ8NDC0 245 aa10.44□□□□□ -0.74
GTF3C1-203ENST00000562609 C10orf105Q8TEF2 133 aa10.44□□□□□ -0.74
GTF3C1-203ENST00000562609 PPP1R17O96001 155 aa10.44□□□□□ -0.74
GTF3C1-203ENST00000562609 CRYGAP11844 174 aa10.44□□□□□ -0.74
GTF3C1-203ENST00000562609 C2orf48Q96LS8 159 aa10.44□□□□□ -0.74
GTF3C1-203ENST00000562609 TEX15Q9BXT5 2789 aa10.44□□□□□ -0.74
GTF3C1-203ENST00000562609 I3L3M4 83 aa10.43□□□□□ -0.74
GTF3C1-203ENST00000562609 CYSTM1Q9H1C7 97 aa10.43□□□□□ -0.74
GTF3C1-203ENST00000562609 IGHV3-49A0A0A0MS15 119 aa10.43□□□□□ -0.74
GTF3C1-203ENST00000562609 OVOL1O14753 267 aa10.43□□□□□ -0.74
GTF3C1-203ENST00000562609 BUB3O43684 328 aa10.43□□□□□ -0.74
GTF3C1-203ENST00000562609 NPC2P61916 151 aa10.43□□□□□ -0.74
GTF3C1-203ENST00000562609 KIR2DL5BQ8NHK3 375 aa10.43□□□□□ -0.74
GTF3C1-203ENST00000562609 DUX5Q96PT3 197 aa10.43□□□□□ -0.74
GTF3C1-203ENST00000562609 F5H768 121 aa10.43□□□□□ -0.74
GTF3C1-203ENST00000562609 ZNF469Q96JG9 3925 aaPredicted RBP10.43□□□□□ -0.74
GTF3C1-203ENST00000562609 SDHAF1A6NFY7 115 aa10.42□□□□□ -0.74
GTF3C1-203ENST00000562609 CLEC19AQ6UXS0 136 aa10.42□□□□□ -0.74
GTF3C1-203ENST00000562609 C9orf47Q6ZRZ4 202 aa10.42□□□□□ -0.74
GTF3C1-203ENST00000562609 CCDC168Q8NDH2 2452 aa10.42□□□□□ -0.74
GTF3C1-203ENST00000562609 TRACP01848 142 aa10.41□□□□□ -0.74
GTF3C1-203ENST00000562609 C4orf26Q17RF5 130 aa10.41□□□□□ -0.74
GTF3C1-203ENST00000562609 CREBBPQ92793 2442 aa10.41□□□□□ -0.74
GTF3C1-203ENST00000562609 CHD6Q8TD26 2715 aa10.41□□□□□ -0.74
GTF3C1-203ENST00000562609 AVPP01185 164 aa10.41□□□□□ -0.74
GTF3C1-203ENST00000562609 IGHV1-69P01742 117 aa10.41□□□□□ -0.74
GTF3C1-203ENST00000562609 POLR2KP53803 58 aaKnown RBP10.41□□□□□ -0.74
GTF3C1-203ENST00000562609 C5orf56Q8N8D9 126 aa10.41□□□□□ -0.74
GTF3C1-203ENST00000562609 LITAFQ99732 161 aa10.41□□□□□ -0.74
GTF3C1-203ENST00000562609 SPANXCQ9NY87 97 aa10.41□□□□□ -0.74
GTF3C1-203ENST00000562609 A0A0J9YX75 114 aa10.4□□□□□ -0.74
GTF3C1-203ENST00000562609 ADAMTSL4-AS1Q5T5F5 129 aa10.4□□□□□ -0.74
GTF3C1-203ENST00000562609 VCYO14598 125 aa10.4□□□□□ -0.74
GTF3C1-203ENST00000562609 RHOHQ15669 191 aa10.4□□□□□ -0.74
GTF3C1-203ENST00000562609 C5orf38Q86SI9 138 aa10.4□□□□□ -0.74
GTF3C1-203ENST00000562609 DPH3Q96FX2 82 aa10.4□□□□□ -0.74
GTF3C1-203ENST00000562609 DCANP1Q8TF63 244 aa10.39□□□□□ -0.75
GTF3C1-203ENST00000562609 ZFAND3Q9H8U3 227 aa10.39□□□□□ -0.75
GTF3C1-203ENST00000562609 SONP18583 2426 aaKnown RBP10.39□□□□□ -0.75
GTF3C1-203ENST00000562609 CUBNO60494 3623 aa10.39□□□□□ -0.75
GTF3C1-203ENST00000562609 A0A0J9YXV3 536 aa10.39□□□□□ -0.75
GTF3C1-203ENST00000562609 HRCT1Q6UXD1 115 aa10.39□□□□□ -0.75
GTF3C1-203ENST00000562609 FAM110DQ8TAY7 271 aaPredicted RBP10.39□□□□□ -0.75
GTF3C1-203ENST00000562609 CCDC140Q96MF4 163 aa10.39□□□□□ -0.75
GTF3C1-203ENST00000562609 H3BUX3 64 aa10.39□□□□□ -0.75
GTF3C1-203ENST00000562609 GNRH2O43555 120 aa10.39□□□□□ -0.75
GTF3C1-203ENST00000562609 TRAV12-3A0A0B4J271 114 aa10.38□□□□□ -0.75
GTF3C1-203ENST00000562609 OXTP01178 125 aa10.38□□□□□ -0.75
GTF3C1-203ENST00000562609 CXCL5P42830 114 aa10.38□□□□□ -0.75
GTF3C1-203ENST00000562609 DSCR8Q96T75 97 aa10.38□□□□□ -0.75
GTF3C1-203ENST00000562609 APCP25054 2843 aa10.38□□□□□ -0.75
GTF3C1-203ENST00000562609 MYO9AB2RTY4 2548 aa10.38□□□□□ -0.75
GTF3C1-203ENST00000562609 IGHV3-30-3P0DP02 117 aa10.38□□□□□ -0.75
GTF3C1-203ENST00000562609 BLCAPP62952 87 aa10.38□□□□□ -0.75
GTF3C1-203ENST00000562609 IGHV4OR15-8A0A075B7B6 117 aa10.37□□□□□ -0.75
GTF3C1-203ENST00000562609 A0A087WW49 117 aa10.37□□□□□ -0.75
GTF3C1-203ENST00000562609 F5H697 171 aa10.37□□□□□ -0.75
GTF3C1-203ENST00000562609 ATOX1O00244 68 aa10.37□□□□□ -0.75
GTF3C1-203ENST00000562609 MSMBP08118 114 aa10.37□□□□□ -0.75
GTF3C1-203ENST00000562609 LINC00315P59091 139 aa10.37□□□□□ -0.75
GTF3C1-203ENST00000562609 SUMO4Q6EEV6 95 aa10.37□□□□□ -0.75
GTF3C1-203ENST00000562609 TIMM21Q9BVV7 248 aa10.37□□□□□ -0.75
GTF3C1-203ENST00000562609 JPT2Q9H910 190 aa10.37□□□□□ -0.75
GTF3C1-203ENST00000562609 TRAV21A0A0B4J279 112 aa10.37□□□□□ -0.75
GTF3C1-203ENST00000562609 TMEM61Q8N0U2 210 aa10.37□□□□□ -0.75
GTF3C1-203ENST00000562609 A0A087WWL8 130 aa10.36□□□□□ -0.75
GTF3C1-203ENST00000562609 TRBV7-1A0A0A6YYK4 115 aa10.36□□□□□ -0.75
GTF3C1-203ENST00000562609 CLPSL1A2RUU4 121 aa10.36□□□□□ -0.75
GTF3C1-203ENST00000562609 NSUN5P1Q3KNT7 163 aa10.36□□□□□ -0.75
GTF3C1-203ENST00000562609 ZFAND2AQ8N6M9 145 aa10.36□□□□□ -0.75
GTF3C1-203ENST00000562609 MRPL53Q96EL3 112 aaKnown RBP10.36□□□□□ -0.75
GTF3C1-203ENST00000562609 MOB4Q9Y3A3 225 aa10.36□□□□□ -0.75
GTF3C1-203ENST00000562609 RNASE3P12724 160 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-203ENST00000562609 KRTAP10-9P60411 292 aa10.35□□□□□ -0.75
GTF3C1-203ENST00000562609 TMEM258P61165 79 aa10.35□□□□□ -0.75
GTF3C1-203ENST00000562609 ZNF843Q8N446 348 aa10.35□□□□□ -0.75
GTF3C1-203ENST00000562609 C16orf92Q96LL3 132 aa10.35□□□□□ -0.75
GTF3C1-203ENST00000562609 KIF25-AS1Q9Y6Z4 181 aa10.35□□□□□ -0.75
GTF3C1-203ENST00000562609 TRBV12-3P01733 135 aa10.35□□□□□ -0.75
GTF3C1-203ENST00000562609 IGHV3-11P01762 117 aa10.35□□□□□ -0.75
GTF3C1-203ENST00000562609 MIAQ16674 131 aa10.35□□□□□ -0.75
GTF3C1-203ENST00000562609 SDIM1Q6ZPB5 146 aa10.35□□□□□ -0.75
GTF3C1-203ENST00000562609 TENM4Q6N022 2769 aa10.35□□□□□ -0.75
GTF3C1-203ENST00000562609 DAZ2Q13117 558 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-203ENST00000562609 DAZ4Q86SG3 579 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-203ENST00000562609 DAZ1Q9NQZ3 744 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-203ENST00000562609 DAZ3Q9NR90 486 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-203ENST00000562609 RNASE4P34096 147 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-203ENST00000562609 DEFB1P60022 68 aa10.34□□□□□ -0.75
GTF3C1-203ENST00000562609 HIST1H4AP62805 103 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-203ENST00000562609 PEMTQ9UBM1 199 aa10.34□□□□□ -0.75
GTF3C1-203ENST00000562609 CITED2Q99967 270 aaPredicted RBP10.34□□□□□ -0.75
GTF3C1-203ENST00000562609 PRRC2AP48634 2157 aaKnown RBP10.33□□□□□ -0.76
GTF3C1-203ENST00000562609 TRAV13-1A0A0B4J241 112 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms