RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 GZMBP10144 247 aa6.23□□□□□ -1.41
HERC1-209ENST00000560519 TMEM97Q5BJF2 176 aa6.23□□□□□ -1.41
HERC1-209ENST00000560519 WDR73Q6P4I2 378 aa6.23□□□□□ -1.41
HERC1-209ENST00000560519 OR10G8Q8NGN5 311 aa6.23□□□□□ -1.41
HERC1-209ENST00000560519 TSKUQ8WUA8 353 aa6.23□□□□□ -1.41
HERC1-209ENST00000560519 BORCS7Q96B45 105 aa6.23□□□□□ -1.41
HERC1-209ENST00000560519 DNAJC30Q96LL9 226 aa6.23□□□□□ -1.41
HERC1-209ENST00000560519 AP1S3Q96PC3 154 aa6.23□□□□□ -1.41
HERC1-209ENST00000560519 GFRA4Q9GZZ7 299 aa6.23□□□□□ -1.41
HERC1-209ENST00000560519 A0A087WWL8 130 aa6.22□□□□□ -1.41
HERC1-209ENST00000560519 TRGC1P0CF51 173 aa6.22□□□□□ -1.41
HERC1-209ENST00000560519 CTRLP40313 264 aa6.22□□□□□ -1.41
HERC1-209ENST00000560519 UBE2D3P61077 147 aa6.22□□□□□ -1.41
HERC1-209ENST00000560519 UBE2D2P62837 147 aa6.22□□□□□ -1.41
HERC1-209ENST00000560519 LYZL1Q6UWQ5 148 aa6.22□□□□□ -1.41
HERC1-209ENST00000560519 C9orf163Q8N9P6 203 aa6.22□□□□□ -1.41
HERC1-209ENST00000560519 JPT2Q9H910 190 aa6.22□□□□□ -1.41
HERC1-209ENST00000560519 MUC21A0A0G2JKD1 596 aa6.21□□□□□ -1.42
HERC1-209ENST00000560519 MUC21A0A140T8X8 626 aa6.21□□□□□ -1.42
HERC1-209ENST00000560519 TMEM218A2RU14 115 aa6.21□□□□□ -1.42
HERC1-209ENST00000560519 PPP1R2P9O14990 202 aa6.21□□□□□ -1.42
HERC1-209ENST00000560519 FOXA3P55318 350 aaPredicted RBP6.21□□□□□ -1.42
HERC1-209ENST00000560519 MPV17L2Q567V2 206 aa6.21□□□□□ -1.42
HERC1-209ENST00000560519 ENHOQ6UWT2 76 aa6.21□□□□□ -1.42
HERC1-209ENST00000560519 SMIM15Q7Z3B0 74 aa6.21□□□□□ -1.42
HERC1-209ENST00000560519 CNFNQ9BYD5 112 aa6.21□□□□□ -1.42
HERC1-209ENST00000560519 Q9UF83 564 aa6.21□□□□□ -1.42
HERC1-209ENST00000560519 V9GYV3 84 aa6.21□□□□□ -1.42
HERC1-209ENST00000560519 PKHD1L1Q86WI1 4243 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 HIGD1CA8MV81 97 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 F8W036 122 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 MT-ND4LP03901 98 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 NTF3P20783 257 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 HNRNPA3P51991 378 aaKnown RBP6.2□□□□□ -1.42
HERC1-209ENST00000560519 RAB4BP61018 213 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 SSTP61278 116 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 TWIST1Q15672 202 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 ZNF56Q15929 161 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 CLRN3Q8NCR9 226 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 GTSF1Q8WW33 167 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 PGLYRP4Q96LB8 373 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 CHCHD5Q9BSY4 110 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 SEC11CQ9BY50 192 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 DPH3P1Q9H4G8 78 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 NAT8BQ9UHF3 227 aa6.2□□□□□ -1.42
HERC1-209ENST00000560519 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.19□□□□□ -1.42
HERC1-209ENST00000560519 A0A1B0GUT8 65 aa6.19□□□□□ -1.42
HERC1-209ENST00000560519 F5H697 171 aa6.19□□□□□ -1.42
HERC1-209ENST00000560519 ANAPC16Q96DE5 110 aa6.19□□□□□ -1.42
HERC1-209ENST00000560519 RNF185Q96GF1 192 aa6.19□□□□□ -1.42
HERC1-209ENST00000560519 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.19□□□□□ -1.42
HERC1-209ENST00000560519 TRBV25-1A0A075B6N4 114 aa6.18□□□□□ -1.42
HERC1-209ENST00000560519 SMIM27A0A1W2PRY6 76 aa6.18□□□□□ -1.42
HERC1-209ENST00000560519 H7C1H1 209 aa6.18□□□□□ -1.42
HERC1-209ENST00000560519 PRSS1P07477 247 aa6.18□□□□□ -1.42
HERC1-209ENST00000560519 CNBPP62633 177 aaKnown RBP6.18□□□□□ -1.42
HERC1-209ENST00000560519 RIGQ13278 110 aa6.18□□□□□ -1.42
HERC1-209ENST00000560519 AP5S1Q9NUS5 200 aa6.18□□□□□ -1.42
HERC1-209ENST00000560519 PRR34Q9NV39 138 aa6.18□□□□□ -1.42
HERC1-209ENST00000560519 IGHV3-64A0A075B6Q5 118 aa6.17□□□□□ -1.42
HERC1-209ENST00000560519 A0A1B0GW15 77 aa6.17□□□□□ -1.42
HERC1-209ENST00000560519 S100A8P05109 93 aa6.17□□□□□ -1.42
HERC1-209ENST00000560519 MGPP08493 103 aa6.17□□□□□ -1.42
HERC1-209ENST00000560519 MT1HL1P0DM35 61 aa6.17□□□□□ -1.42
HERC1-209ENST00000560519 ADCYAP1P18509 176 aa6.17□□□□□ -1.42
HERC1-209ENST00000560519 CIRBPQ14011 172 aaKnown RBP6.17□□□□□ -1.42
HERC1-209ENST00000560519 NDUFA5Q16718 116 aa6.17□□□□□ -1.42
HERC1-209ENST00000560519 NEXN-AS1Q8NBZ9 246 aa6.17□□□□□ -1.42
HERC1-209ENST00000560519 NUP35Q8NFH5 326 aa6.17□□□□□ -1.42
HERC1-209ENST00000560519 C7orf33Q8WU49 177 aa6.17□□□□□ -1.42
HERC1-209ENST00000560519 KIF25-AS1Q9Y6Z4 181 aa6.17□□□□□ -1.42
HERC1-209ENST00000560519 TRAV8-4A0A0B4J246 113 aa6.16□□□□□ -1.42
HERC1-209ENST00000560519 CLPSL2Q6UWE3 100 aa6.16□□□□□ -1.42
HERC1-209ENST00000560519 CTDSP1Q9GZU7 261 aa6.16□□□□□ -1.42
HERC1-209ENST00000560519 CARHSP1Q9Y2V2 147 aaKnown RBP6.16□□□□□ -1.42
HERC1-209ENST00000560519 hDV102S1A0JD36 115 aa6.15□□□□□ -1.42
HERC1-209ENST00000560519 RBX1P62877 108 aa6.15□□□□□ -1.42
HERC1-209ENST00000560519 REG3AQ06141 175 aa6.15□□□□□ -1.42
HERC1-209ENST00000560519 C10orf91Q5T1B1 145 aa6.15□□□□□ -1.42
HERC1-209ENST00000560519 SDIM1Q6ZPB5 146 aa6.15□□□□□ -1.42
HERC1-209ENST00000560519 LINC00269Q8N2A0 174 aa6.15□□□□□ -1.42
HERC1-209ENST00000560519 TMEM191AQ9H0A3 160 aa6.15□□□□□ -1.42
HERC1-209ENST00000560519 IGHV1-24A0A0C4DH33 117 aa6.14□□□□□ -1.43
HERC1-209ENST00000560519 M0QY20 66 aa6.14□□□□□ -1.43
HERC1-209ENST00000560519 RHEBQ15382 184 aa6.14□□□□□ -1.43
HERC1-209ENST00000560519 IQCJQ1A5X6 159 aa6.14□□□□□ -1.43
HERC1-209ENST00000560519 SUMO4Q6EEV6 95 aa6.14□□□□□ -1.43
HERC1-209ENST00000560519 RASL11AQ6T310 242 aa6.14□□□□□ -1.43
HERC1-209ENST00000560519 ATP5L2Q7Z4Y8 100 aa6.14□□□□□ -1.43
HERC1-209ENST00000560519 SPACA4Q8TDM5 124 aa6.14□□□□□ -1.43
HERC1-209ENST00000560519 DPH3Q96FX2 82 aa6.14□□□□□ -1.43
HERC1-209ENST00000560519 IMMP2LQ96T52 175 aa6.14□□□□□ -1.43
HERC1-209ENST00000560519 PANO1I0J062 215 aa6.13□□□□□ -1.43
HERC1-209ENST00000560519 HBBP68871 147 aa6.13□□□□□ -1.43
HERC1-209ENST00000560519 KRTAP26-1Q6PEX3 210 aa6.13□□□□□ -1.43
HERC1-209ENST00000560519 TMEM242Q9NWH2 141 aa6.13□□□□□ -1.43
HERC1-209ENST00000560519 PKIGQ9Y2B9 76 aa6.13□□□□□ -1.43
HERC1-209ENST00000560519 IGLV10-54A0A075B6I4 117 aa6.12□□□□□ -1.43
HERC1-209ENST00000560519 TRAV9-1A0A075B6T8 112 aa6.12□□□□□ -1.43
HERC1-209ENST00000560519 A0A087WYN8 130 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 204.4 ms