RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 A0A087WTM6 91 aa2.06□□□□□ -2.08
VRK1-203ENST00000555067 NAP1L6A6NFF2 107 aa2.06□□□□□ -2.08
VRK1-203ENST00000555067 ELOF1P60002 83 aaKnown RBP2.06□□□□□ -2.08
VRK1-203ENST00000555067 Q0VG73 95 aa2.06□□□□□ -2.08
VRK1-203ENST00000555067 PSME4Q14997 1843 aa2.05□□□□□ -2.08
VRK1-203ENST00000555067 TRBV7-3A0A075B6L6 115 aa2.05□□□□□ -2.08
VRK1-203ENST00000555067 CAV3P56539 151 aa2.05□□□□□ -2.08
VRK1-203ENST00000555067 BET1LQ9NYM9 111 aa2.05□□□□□ -2.08
VRK1-203ENST00000555067 PLEKHH2Q8IVE3 1493 aa2.05□□□□□ -2.08
VRK1-203ENST00000555067 LRRC37A3O60309 1634 aa2.05□□□□□ -2.08
VRK1-203ENST00000555067 ASCC3Q8N3C0 2202 aaKnown RBP2.05□□□□□ -2.08
VRK1-203ENST00000555067 UQCRHLA0A096LP55 91 aa2.04□□□□□ -2.08
VRK1-203ENST00000555067 A0A1W2PPM0 123 aa2.04□□□□□ -2.08
VRK1-203ENST00000555067 CRYM-AS1A6NIL9 109 aa2.04□□□□□ -2.08
VRK1-203ENST00000555067 UQCRHP07919 91 aa2.04□□□□□ -2.08
VRK1-203ENST00000555067 IGLC1P0CG04 106 aa2.04□□□□□ -2.08
VRK1-203ENST00000555067 EDDM3BP56851 147 aa2.04□□□□□ -2.08
VRK1-203ENST00000555067 KRTDAPP60985 99 aa2.04□□□□□ -2.08
VRK1-203ENST00000555067 SEC11AP67812 179 aa2.04□□□□□ -2.08
VRK1-203ENST00000555067 FAM74A4Q5TZK3 123 aa2.04□□□□□ -2.08
VRK1-203ENST00000555067 PXDNQ92626 1479 aa2.04□□□□□ -2.08
VRK1-203ENST00000555067 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.03□□□□□ -2.08
VRK1-203ENST00000555067 KLKP1Q107X0 134 aa2.03□□□□□ -2.08
VRK1-203ENST00000555067 PPP1R1CQ8WVI7 109 aa2.03□□□□□ -2.08
VRK1-203ENST00000555067 LOC285556D6RIA3 1793 aa2.03□□□□□ -2.09
VRK1-203ENST00000555067 PRDM15P57071 1507 aaPredicted RBP2.02□□□□□ -2.09
VRK1-203ENST00000555067 TECTAO75443 2155 aa2.02□□□□□ -2.09
VRK1-203ENST00000555067 NCR3O14931 201 aa2.02□□□□□ -2.09
VRK1-203ENST00000555067 EFNA4P52798 201 aa2.02□□□□□ -2.09
VRK1-203ENST00000555067 MGST2Q99735 147 aa2.02□□□□□ -2.09
VRK1-203ENST00000555067 PRO1933Q9H354 126 aa2.02□□□□□ -2.09
VRK1-203ENST00000555067 MANBALQ9NQG1 85 aa2.02□□□□□ -2.09
VRK1-203ENST00000555067 PI4KAP42356 2102 aa2.02□□□□□ -2.09
VRK1-203ENST00000555067 NCOA6Q14686 2063 aaPredicted RBP2.02□□□□□ -2.09
VRK1-203ENST00000555067 DOCK11Q5JSL3 2073 aa2.02□□□□□ -2.09
VRK1-203ENST00000555067 PPP1R17O96001 155 aa2.01□□□□□ -2.09
VRK1-203ENST00000555067 Q5VV11 94 aa2.01□□□□□ -2.09
VRK1-203ENST00000555067 NDUFA4L2Q9NRX3 87 aa2.01□□□□□ -2.09
VRK1-203ENST00000555067 SCP2D1Q9UJQ7 156 aa2.01□□□□□ -2.09
VRK1-203ENST00000555067 LENEPQ9Y5L5 61 aa2.01□□□□□ -2.09
VRK1-203ENST00000555067 V9GYV3 84 aa2.01□□□□□ -2.09
VRK1-203ENST00000555067 MED13LQ71F56 2210 aa2.01□□□□□ -2.09
VRK1-203ENST00000555067 MED14O60244 1454 aa2.01□□□□□ -2.09
VRK1-203ENST00000555067 MRC1P22897 1456 aa2.01□□□□□ -2.09
VRK1-203ENST00000555067 SIPA1L3O60292 1781 aaPredicted RBP2□□□□□ -2.09
VRK1-203ENST00000555067 MARF1Q9Y4F3 1742 aaKnown RBP2□□□□□ -2.09
VRK1-203ENST00000555067 TOP2BQ02880 1626 aa2□□□□□ -2.09
VRK1-203ENST00000555067 CHKB-CPT1BH3BT56 60 aa2□□□□□ -2.09
VRK1-203ENST00000555067 FAM167A-AS1Q96KT0 104 aa2□□□□□ -2.09
VRK1-203ENST00000555067 NPVFQ9HCQ7 196 aa2□□□□□ -2.09
VRK1-203ENST00000555067 TRAV22A0A0B4J277 110 aa1.99□□□□□ -2.09
VRK1-203ENST00000555067 TRBV30A0A0K0K1B3 111 aa1.99□□□□□ -2.09
VRK1-203ENST00000555067 J3QKU1 62 aa1.99□□□□□ -2.09
VRK1-203ENST00000555067 ATOX1O00244 68 aa1.99□□□□□ -2.09
VRK1-203ENST00000555067 UBE2D3P61077 147 aa1.99□□□□□ -2.09
VRK1-203ENST00000555067 UBE2D2P62837 147 aa1.99□□□□□ -2.09
VRK1-203ENST00000555067 DYNLRB1Q9NP97 96 aa1.99□□□□□ -2.09
VRK1-203ENST00000555067 TMEM14BQ9NUH8 114 aa1.99□□□□□ -2.09
VRK1-203ENST00000555067 SBF2Q86WG5 1849 aa1.98□□□□□ -2.09
VRK1-203ENST00000555067 ABCA1O95477 2261 aa1.98□□□□□ -2.09
VRK1-203ENST00000555067 SORL1Q92673 2214 aa1.98□□□□□ -2.09
VRK1-203ENST00000555067 MON2Q7Z3U7 1717 aa1.98□□□□□ -2.09
VRK1-203ENST00000555067 PYY3Q5JQD4 70 aa1.98□□□□□ -2.09
VRK1-203ENST00000555067 LINC00575Q6W349 94 aa1.98□□□□□ -2.09
VRK1-203ENST00000555067 DEFB119Q8N690 84 aa1.98□□□□□ -2.09
VRK1-203ENST00000555067 FAIMQ9NVQ4 179 aa1.98□□□□□ -2.09
VRK1-203ENST00000555067 KDM5AP29375 1690 aaKnown RBP1.98□□□□□ -2.09
VRK1-203ENST00000555067 FLG2Q5D862 2391 aaPredicted RBP1.98□□□□□ -2.09
VRK1-203ENST00000555067 HMGN4O00479 90 aa1.97□□□□□ -2.09
VRK1-203ENST00000555067 SFT2D2O95562 160 aa1.97□□□□□ -2.09
VRK1-203ENST00000555067 ASIPP42127 132 aa1.97□□□□□ -2.09
VRK1-203ENST00000555067 CCL18P55774 89 aa1.97□□□□□ -2.09
VRK1-203ENST00000555067 SPAG11BQ08648 103 aa1.97□□□□□ -2.09
VRK1-203ENST00000555067 SPAG11AQ6PDA7 123 aa1.97□□□□□ -2.09
VRK1-203ENST00000555067 Q8N6K4 173 aa1.97□□□□□ -2.09
VRK1-203ENST00000555067 UQCR10Q9UDW1 63 aa1.97□□□□□ -2.09
VRK1-203ENST00000555067 TRBV7-7A0A0K0K1E9 115 aa1.96□□□□□ -2.1
VRK1-203ENST00000555067 FAUP35544 74 aaKnown RBP1.96□□□□□ -2.1
VRK1-203ENST00000555067 SFTA2Q6UW10 78 aa1.96□□□□□ -2.1
VRK1-203ENST00000555067 C10orf99Q6UWK7 81 aa1.96□□□□□ -2.1
VRK1-203ENST00000555067 Q96NJ1 140 aa1.96□□□□□ -2.1
VRK1-203ENST00000555067 PRO1854Q9UHT4 67 aa1.96□□□□□ -2.1
VRK1-203ENST00000555067 V9GYH0 126 aa1.96□□□□□ -2.1
VRK1-203ENST00000555067 ARHGEF5Q12774 1597 aa1.96□□□□□ -2.1
VRK1-203ENST00000555067 MYOM1P52179 1685 aa1.96□□□□□ -2.1
VRK1-203ENST00000555067 CCDC18Q5T9S5 1454 aa1.95□□□□□ -2.1
VRK1-203ENST00000555067 APOC3P02656 99 aa1.95□□□□□ -2.1
VRK1-203ENST00000555067 LYNX1P0DP58 116 aa1.95□□□□□ -2.1
VRK1-203ENST00000555067 BPESC1Q9GZL8 116 aa1.95□□□□□ -2.1
VRK1-203ENST00000555067 CDC42SE2Q9NRR3 84 aa1.95□□□□□ -2.1
VRK1-203ENST00000555067 ABCC3O15438 1527 aa1.95□□□□□ -2.1
VRK1-203ENST00000555067 ARHGEF12Q9NZN5 1544 aa1.95□□□□□ -2.1
VRK1-203ENST00000555067 COL4A6Q14031 1691 aa1.94□□□□□ -2.1
VRK1-203ENST00000555067 MUC6Q6W4X9 2439 aa1.94□□□□□ -2.1
VRK1-203ENST00000555067 NDUFC1O43677 76 aa1.94□□□□□ -2.1
VRK1-203ENST00000555067 SERP2Q8N6R1 65 aa1.94□□□□□ -2.1
VRK1-203ENST00000555067 WFDC6Q9BQY6 131 aa1.94□□□□□ -2.1
VRK1-203ENST00000555067 MLH3Q9UHC1 1453 aa1.94□□□□□ -2.1
VRK1-203ENST00000555067 MAP2P11137 1827 aaKnown RBP1.94□□□□□ -2.1
VRK1-203ENST00000555067 A0A0G2JND7 137 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms