RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	CTRL	P40313	264 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	ZNF80	P51504	273 aa	Predicted RBP	3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	GNG5	P63218	68 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	PRR3	P79522	188 aa	Known RBP	3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	TDRG1	Q3Y452	100 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	LINC01556	Q5JQF7	62 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956		Q6ZSA8	131 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	CAMK2N1	Q7Z7J9	78 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	STX12	Q86Y82	276 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	SLC25A29	Q8N8R3	303 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	TMEM75	Q8N9X5	138 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	RNF185	Q96GF1	192 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	DNAJC30	Q96LL9	226 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	HYLS1	Q96M11	299 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	TMEM70	Q9BUB7	260 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	SLC25A31	Q9H0C2	315 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	WFDC1	Q9HC57	220 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	NAGK	Q9UJ70	344 aa		3.21	□□□□□ -1.9
PSMC6-208	ENST00000554956	RBAKDN	A6NC62	111 aa		3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956	PGP	A6NDG6	321 aa		3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956		C9JCJ5	164 aa		3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956		M0R2P5	195 aa		3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956	HMGB3	O15347	200 aa	Known RBP	3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956	GATC	O43716	136 aa	Known RBP	3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956	OR7C2	O60412	319 aa		3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956	ORM1	P02763	201 aa		3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956	PVALB	P20472	110 aa	Predicted RBP	3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956	H2BFS	P57053	126 aa		3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956	CACNG7	P62955	275 aa		3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956	HBG1	P69891	147 aa		3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956	HBG2	P69892	147 aa		3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956	IFITM3	Q01628	133 aa		3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956	CFAP126	Q5VTH2	177 aa		3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956	SMIM3	Q9BZL3	60 aa		3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956	PSG8	Q9UQ74	426 aa		3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956	LRP1	Q07954	4544 aa	Known RBP	3.2	□□□□□ -1.9
PSMC6-208	ENST00000554956		K7EP13	123 aa		3.19	□□□□□ -1.9
PSMC6-208	ENST00000554956	LINC00694	P0DN24	101 aa		3.19	□□□□□ -1.9
PSMC6-208	ENST00000554956	RNASE3	P12724	160 aa	Known RBP	3.19	□□□□□ -1.9
PSMC6-208	ENST00000554956	CSN1S1	P47710	185 aa		3.19	□□□□□ -1.9
PSMC6-208	ENST00000554956	UBE2L3	P68036	154 aa	Known RBP	3.19	□□□□□ -1.9
PSMC6-208	ENST00000554956	GOLT1A	Q6ZVE7	132 aa		3.19	□□□□□ -1.9
PSMC6-208	ENST00000554956	SCX	Q7RTU7	201 aa		3.19	□□□□□ -1.9
PSMC6-208	ENST00000554956	DAZ4	Q86SG3	579 aa	Known RBP	3.19	□□□□□ -1.9
PSMC6-208	ENST00000554956	C10orf126	Q8N4M7	172 aa		3.19	□□□□□ -1.9
PSMC6-208	ENST00000554956	TXNDC17	Q9BRA2	123 aa		3.19	□□□□□ -1.9
PSMC6-208	ENST00000554956	SAMD10	Q9BYL1	202 aa		3.19	□□□□□ -1.9
PSMC6-208	ENST00000554956	LENEP	Q9Y5L5	61 aa		3.19	□□□□□ -1.9
PSMC6-208	ENST00000554956	URGCP-MRPS24	S4R325	110 aa		3.19	□□□□□ -1.9
PSMC6-208	ENST00000554956	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	3.18	□□□□□ -1.9
PSMC6-208	ENST00000554956	TRAV21	A0A0B4J279	112 aa		3.18	□□□□□ -1.9
PSMC6-208	ENST00000554956	SMLR1	H3BR10	107 aa		3.18	□□□□□ -1.9
PSMC6-208	ENST00000554956	PSCA	O43653	123 aa		3.18	□□□□□ -1.9
PSMC6-208	ENST00000554956	RAB2A	P61019	212 aa		3.18	□□□□□ -1.9
PSMC6-208	ENST00000554956	HERVK_113	P61574	105 aa		3.18	□□□□□ -1.9
PSMC6-208	ENST00000554956	OR10J3	Q5JRS4	329 aa		3.18	□□□□□ -1.9
PSMC6-208	ENST00000554956	LELP1	Q5T871	98 aa		3.18	□□□□□ -1.9
PSMC6-208	ENST00000554956	PPP1R1C	Q8WVI7	109 aa		3.18	□□□□□ -1.9
PSMC6-208	ENST00000554956	NMES1	Q9C002	83 aa		3.18	□□□□□ -1.9
PSMC6-208	ENST00000554956	OTOR	Q9NRC9	128 aa		3.18	□□□□□ -1.9
PSMC6-208	ENST00000554956	HSPB11	Q9Y547	144 aa		3.18	□□□□□ -1.9
PSMC6-208	ENST00000554956	TRAV8-6	A0A0B4J262	113 aa		3.17	□□□□□ -1.9
PSMC6-208	ENST00000554956	IGHV3OR16-9	A0A0B4J2B5	98 aa		3.17	□□□□□ -1.9
PSMC6-208	ENST00000554956		A0A0J9YXV3	536 aa		3.17	□□□□□ -1.9
PSMC6-208	ENST00000554956	TRBV6-4	A0A1B0GX49	114 aa		3.17	□□□□□ -1.9
PSMC6-208	ENST00000554956	C1QB	P02746	253 aa		3.17	□□□□□ -1.9
PSMC6-208	ENST00000554956	PFN1	P07737	140 aa	Known RBP	3.17	□□□□□ -1.9
PSMC6-208	ENST00000554956	NMU	P48645	174 aa		3.17	□□□□□ -1.9
PSMC6-208	ENST00000554956	C5orf47	Q569G3	176 aa		3.17	□□□□□ -1.9
PSMC6-208	ENST00000554956	OR2T35	Q8NGX2	323 aa		3.17	□□□□□ -1.9
PSMC6-208	ENST00000554956	ATP6V0E2	Q8NHE4	81 aa		3.17	□□□□□ -1.9
PSMC6-208	ENST00000554956	ASB13	Q8WXK3	278 aa		3.17	□□□□□ -1.9
PSMC6-208	ENST00000554956	CCDC32	Q9BV29	185 aa		3.17	□□□□□ -1.9
PSMC6-208	ENST00000554956	GTSF1L	Q9H1H1	148 aa		3.17	□□□□□ -1.9
PSMC6-208	ENST00000554956	UBR4	Q5T4S7	5183 aa		3.17	□□□□□ -1.9
PSMC6-208	ENST00000554956	HMCN2	Q8NDA2	5059 aa		3.17	□□□□□ -1.9
PSMC6-208	ENST00000554956	SMIM26	A0A096LP01	95 aa		3.16	□□□□□ -1.9
PSMC6-208	ENST00000554956	GGTLC3	B5MD39	225 aa		3.16	□□□□□ -1.9
PSMC6-208	ENST00000554956	C17orf112	F2Z3M2	114 aa		3.16	□□□□□ -1.9
PSMC6-208	ENST00000554956	MPC2	O95563	127 aa		3.16	□□□□□ -1.9
PSMC6-208	ENST00000554956	TCRA	P04437	139 aa		3.16	□□□□□ -1.9
PSMC6-208	ENST00000554956	OR5AL1	P0C617	328 aa		3.16	□□□□□ -1.9
PSMC6-208	ENST00000554956	ARL14EPL	P0DKL9	152 aa		3.16	□□□□□ -1.9
PSMC6-208	ENST00000554956	RPL12	P30050	165 aa	Known RBP	3.16	□□□□□ -1.9
PSMC6-208	ENST00000554956	CRIP1	P50238	77 aa		3.16	□□□□□ -1.9
PSMC6-208	ENST00000554956	RHOH	Q15669	191 aa		3.16	□□□□□ -1.9
PSMC6-208	ENST00000554956	KHDC3L	Q587J8	217 aa		3.16	□□□□□ -1.9
PSMC6-208	ENST00000554956	CMTM2	Q8TAZ6	248 aa		3.16	□□□□□ -1.9
PSMC6-208	ENST00000554956	CIRBP-AS1	Q8TBR5	109 aa		3.16	□□□□□ -1.9
PSMC6-208	ENST00000554956	PRADC1	Q9BSG0	188 aa		3.16	□□□□□ -1.9
PSMC6-208	ENST00000554956	FAM240A	A0A1B0GVK7	77 aa		3.15	□□□□□ -1.91
PSMC6-208	ENST00000554956	INMT-MINDY4	F8WBC2	141 aa		3.15	□□□□□ -1.91
PSMC6-208	ENST00000554956		M0QXV9	152 aa		3.15	□□□□□ -1.91
PSMC6-208	ENST00000554956	UPK1B	O75841	260 aa		3.15	□□□□□ -1.91
PSMC6-208	ENST00000554956	GCHFR	P30047	84 aa		3.15	□□□□□ -1.91
PSMC6-208	ENST00000554956	CXCL5	P42830	114 aa		3.15	□□□□□ -1.91
PSMC6-208	ENST00000554956	TAS2R45	P59539	299 aa		3.15	□□□□□ -1.91
PSMC6-208	ENST00000554956	ACOT6	Q3I5F7	207 aa	Predicted RBP	3.15	□□□□□ -1.91
PSMC6-208	ENST00000554956		Q5BKY6	102 aa		3.15	□□□□□ -1.91
PSMC6-208	ENST00000554956	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.15	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms