RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 A0A0J9YXV3 536 aa11.58□□□□□ -0.56
SYNE3-203ENST00000554873 SUMO4Q6EEV6 95 aa11.58□□□□□ -0.56
SYNE3-203ENST00000554873 DAZ2Q13117 558 aaKnown RBP11.58□□□□□ -0.56
SYNE3-203ENST00000554873 DAZ4Q86SG3 579 aaKnown RBP11.58□□□□□ -0.56
SYNE3-203ENST00000554873 ZFAND2AQ8N6M9 145 aa11.58□□□□□ -0.56
SYNE3-203ENST00000554873 SERP2Q8N6R1 65 aa11.58□□□□□ -0.56
SYNE3-203ENST00000554873 ITLN2Q8WWU7 325 aaPredicted RBP11.58□□□□□ -0.56
SYNE3-203ENST00000554873 FAM19A4Q96LR4 140 aa11.58□□□□□ -0.56
SYNE3-203ENST00000554873 UPK3BQ9BT76 320 aa11.58□□□□□ -0.56
SYNE3-203ENST00000554873 DAZ1Q9NQZ3 744 aaKnown RBP11.58□□□□□ -0.56
SYNE3-203ENST00000554873 DAZ3Q9NR90 486 aaKnown RBP11.58□□□□□ -0.56
SYNE3-203ENST00000554873 ZFHX3Q15911 3703 aa11.58□□□□□ -0.56
SYNE3-203ENST00000554873 COL6A6A6NMZ7 2263 aa11.57□□□□□ -0.56
SYNE3-203ENST00000554873 NXPH4O95158 308 aa11.57□□□□□ -0.56
SYNE3-203ENST00000554873 NBL1P41271 181 aa11.57□□□□□ -0.56
SYNE3-203ENST00000554873 DEFB1P60022 68 aa11.57□□□□□ -0.56
SYNE3-203ENST00000554873 C5orf56Q8N8D9 126 aa11.57□□□□□ -0.56
SYNE3-203ENST00000554873 RNASE3P12724 160 aaKnown RBP11.56□□□□□ -0.56
SYNE3-203ENST00000554873 TRAV13-1A0A0B4J241 112 aa11.56□□□□□ -0.56
SYNE3-203ENST00000554873 NPC2P61916 151 aa11.56□□□□□ -0.56
SYNE3-203ENST00000554873 NSUN5P1Q3KNT7 163 aa11.56□□□□□ -0.56
SYNE3-203ENST00000554873 C9orf139Q6ZV77 190 aa11.55□□□□□ -0.56
SYNE3-203ENST00000554873 LINC00477Q96M19 166 aa11.55□□□□□ -0.56
SYNE3-203ENST00000554873 NDUFA12Q9UI09 145 aa11.55□□□□□ -0.56
SYNE3-203ENST00000554873 TRBV6-5A0A0K0K1A5 114 aa11.55□□□□□ -0.56
SYNE3-203ENST00000554873 JPT2Q9H910 190 aa11.55□□□□□ -0.56
SYNE3-203ENST00000554873 COX7A2LO14548 114 aa11.55□□□□□ -0.56
SYNE3-203ENST00000554873 GNRH2O43555 120 aa11.55□□□□□ -0.56
SYNE3-203ENST00000554873 TIRAPP58753 221 aa11.55□□□□□ -0.56
SYNE3-203ENST00000554873 UNQ9165/PRO28630Q6UXU0 137 aa11.55□□□□□ -0.56
SYNE3-203ENST00000554873 PYGO1Q9Y3Y4 419 aa11.55□□□□□ -0.56
SYNE3-203ENST00000554873 INAFM2P0DMQ5 153 aa11.54□□□□□ -0.56
SYNE3-203ENST00000554873 LMO4P61968 165 aa11.54□□□□□ -0.56
SYNE3-203ENST00000554873 TRBV12-3P01733 135 aa11.54□□□□□ -0.56
SYNE3-203ENST00000554873 IGF2RP11717 2491 aa11.53□□□□□ -0.56
SYNE3-203ENST00000554873 F5H697 171 aa11.53□□□□□ -0.56
SYNE3-203ENST00000554873 RNF152Q8N8N0 203 aa11.53□□□□□ -0.56
SYNE3-203ENST00000554873 TRAV12-3A0A0B4J271 114 aa11.53□□□□□ -0.56
SYNE3-203ENST00000554873 IGHV1-58A0A0C4DH39 117 aa11.53□□□□□ -0.56
SYNE3-203ENST00000554873 KLRB1Q12918 225 aa11.53□□□□□ -0.56
SYNE3-203ENST00000554873 BAALC-AS2P0C853 105 aa11.52□□□□□ -0.56
SYNE3-203ENST00000554873 C19orf54Q5BKX5 351 aa11.52□□□□□ -0.56
SYNE3-203ENST00000554873 BPESC1Q9GZL8 116 aa11.52□□□□□ -0.56
SYNE3-203ENST00000554873 IGLV4-3A0A075B6K6 122 aa11.52□□□□□ -0.57
SYNE3-203ENST00000554873 IGHV3OR16-10A0A075B7F0 116 aa11.51□□□□□ -0.57
SYNE3-203ENST00000554873 SOCS3O14543 225 aa11.51□□□□□ -0.57
SYNE3-203ENST00000554873 RNASE4P34096 147 aaKnown RBP11.51□□□□□ -0.57
SYNE3-203ENST00000554873 FAM223BA6NKX1 122 aa11.51□□□□□ -0.57
SYNE3-203ENST00000554873 TIMM17BO60830 172 aa11.51□□□□□ -0.57
SYNE3-203ENST00000554873 FAM222AQ5U5X8 452 aa11.51□□□□□ -0.57
SYNE3-203ENST00000554873 FAM223AQ8IWN6 122 aa11.51□□□□□ -0.57
SYNE3-203ENST00000554873 C20orf203Q8NBC4 194 aa11.51□□□□□ -0.57
SYNE3-203ENST00000554873 F6UB75 175 aa11.5□□□□□ -0.57
SYNE3-203ENST00000554873 A0A087WWL8 130 aa11.5□□□□□ -0.57
SYNE3-203ENST00000554873 MALP21145 153 aa11.5□□□□□ -0.57
SYNE3-203ENST00000554873 BEAN1Q3B7T3 259 aa11.5□□□□□ -0.57
SYNE3-203ENST00000554873 SPTAN1Q13813 2472 aaKnown RBP11.5□□□□□ -0.57
SYNE3-203ENST00000554873 MOB4Q9Y3A3 225 aa11.5□□□□□ -0.57
SYNE3-203ENST00000554873 MUC4Q99102 2169 aa11.49□□□□□ -0.57
SYNE3-203ENST00000554873 HIVEP3Q5T1R4 2406 aa11.49□□□□□ -0.57
SYNE3-203ENST00000554873 MRPS36P82909 103 aaKnown RBP11.49□□□□□ -0.57
SYNE3-203ENST00000554873 PRO0628Q9UI54 55 aa11.49□□□□□ -0.57
SYNE3-203ENST00000554873 C22orf24Q9Y442 160 aa11.49□□□□□ -0.57
SYNE3-203ENST00000554873 NDUFA4O00483 81 aa11.48□□□□□ -0.57
SYNE3-203ENST00000554873 RPL11P62913 178 aaKnown RBP11.48□□□□□ -0.57
SYNE3-203ENST00000554873 CELSR1Q9NYQ6 3014 aa11.48□□□□□ -0.57
SYNE3-203ENST00000554873 IGKV3-7A0A075B6H7 116 aa11.48□□□□□ -0.57
SYNE3-203ENST00000554873 F8WDY8 70 aa11.48□□□□□ -0.57
SYNE3-203ENST00000554873 SYNJ2BPP57105 145 aa11.48□□□□□ -0.57
SYNE3-203ENST00000554873 VSIG2Q96IQ7 327 aa11.48□□□□□ -0.57
SYNE3-203ENST00000554873 IGHV3-11P01762 117 aa11.47□□□□□ -0.57
SYNE3-203ENST00000554873 Q6JHZ5 121 aa11.47□□□□□ -0.57
SYNE3-203ENST00000554873 APRG1Q8IVJ8 170 aa11.47□□□□□ -0.57
SYNE3-203ENST00000554873 BRD3OSQ6XYD6 125 aa11.46□□□□□ -0.58
SYNE3-203ENST00000554873 C10orf105Q8TEF2 133 aa11.46□□□□□ -0.58
SYNE3-203ENST00000554873 PRRC2AP48634 2157 aaKnown RBP11.46□□□□□ -0.58
SYNE3-203ENST00000554873 NDUFC2-KCTD14E9PQ53 114 aa11.45□□□□□ -0.58
SYNE3-203ENST00000554873 USP17L23D6RBM5 183 aa11.45□□□□□ -0.58
SYNE3-203ENST00000554873 J3QLI3 93 aa11.45□□□□□ -0.58
SYNE3-203ENST00000554873 M0QY20 66 aa11.45□□□□□ -0.58
SYNE3-203ENST00000554873 ABCA2Q9BZC7 2435 aa11.44□□□□□ -0.58
SYNE3-203ENST00000554873 IGKV3D-7A0A0C4DH55 119 aa11.44□□□□□ -0.58
SYNE3-203ENST00000554873 CD28P10747 220 aa11.44□□□□□ -0.58
SYNE3-203ENST00000554873 PFN2P35080 140 aa11.44□□□□□ -0.58
SYNE3-203ENST00000554873 FAM74A4Q5TZK3 123 aa11.44□□□□□ -0.58
SYNE3-203ENST00000554873 A8MZ25 164 aa11.43□□□□□ -0.58
SYNE3-203ENST00000554873 RS1O15537 224 aa11.43□□□□□ -0.58
SYNE3-203ENST00000554873 DNAL4O96015 105 aa11.43□□□□□ -0.58
SYNE3-203ENST00000554873 RHPN1-AS1Q9BWJ2 59 aa11.43□□□□□ -0.58
SYNE3-203ENST00000554873 NDUFC2O95298 119 aa11.43□□□□□ -0.58
SYNE3-203ENST00000554873 LY6EQ16553 131 aa11.43□□□□□ -0.58
SYNE3-203ENST00000554873 LINC01561Q8N1V8 128 aa11.42□□□□□ -0.58
SYNE3-203ENST00000554873 CIRBPQ14011 172 aaKnown RBP11.42□□□□□ -0.58
SYNE3-203ENST00000554873 LINC00308Q8TCZ7 52 aa11.42□□□□□ -0.58
SYNE3-203ENST00000554873 USMG5Q96IX5 58 aa11.42□□□□□ -0.58
SYNE3-203ENST00000554873 VPS13CQ709C8 3753 aa11.42□□□□□ -0.58
SYNE3-203ENST00000554873 A0A087WVE0 104 aa11.41□□□□□ -0.58
SYNE3-203ENST00000554873 FHL2Q14192 279 aa11.41□□□□□ -0.58
SYNE3-203ENST00000554873 PRIMA1Q86XR5 153 aa11.41□□□□□ -0.58
SYNE3-203ENST00000554873 TINCRA0A1B0GVN0 87 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms