RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 TMEM61Q8N0U2 210 aa2.93□□□□□ -1.94
KTN1-217ENST00000554831 UBE2WQ96B02 151 aa2.93□□□□□ -1.94
KTN1-217ENST00000554831 LOC400499M0QZD8 3231 aa2.93□□□□□ -1.94
KTN1-217ENST00000554831 RNF223E7ERA6 249 aa2.93□□□□□ -1.94
KTN1-217ENST00000554831 EIF4EBP3O60516 100 aaPredicted RBP2.93□□□□□ -1.94
KTN1-217ENST00000554831 A0A1W2PPR1 153 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 BRI3O95415 125 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 CRIP2P52943 208 aaPredicted RBP2.92□□□□□ -1.94
KTN1-217ENST00000554831 LINC00158P58513 81 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 CDSNQ15517 529 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 C6orf226Q5I0X4 101 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 PRR9Q5T870 116 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 M0QY20 66 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 LGALS9O00182 355 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 PAX4O43316 350 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 TSPAN13O95857 204 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 DNAJC30Q96LL9 226 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 IGHV3-16A0A0C4DH30 117 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 GAGE12JA6NER3 117 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 GAGE7O76087 117 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 IGHV3-33P01772 117 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 GAGE12FP0CL80 117 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 GAGE12GP0CL81 117 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 GAGE12IP0CL82 117 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 NPC2P61916 151 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 GAGE4Q13068 117 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 C20orf173Q96LM9 149 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 IGHV1-58A0A0C4DH39 117 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 TRBV10-1A0A0K0K1A3 114 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 RBMY1BA6NDE4 496 aaKnown RBP2.92□□□□□ -1.94
KTN1-217ENST00000554831 RBMY1EA6NEQ0 496 aaKnown RBP2.92□□□□□ -1.94
KTN1-217ENST00000554831 IGIPA6NJ69 53 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 RBMY1DP0C7P1 496 aaKnown RBP2.92□□□□□ -1.94
KTN1-217ENST00000554831 RBMY1A1P0DJD3 496 aaKnown RBP2.92□□□□□ -1.94
KTN1-217ENST00000554831 RBMY1CP0DJD4 496 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 ZNF22P17026 224 aaPredicted RBP2.92□□□□□ -1.94
KTN1-217ENST00000554831 NSUN5P1Q3KNT7 163 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 MAPK1IP1LQ8NDC0 245 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 UBR5O95071 2799 aaPredicted RBP2.92□□□□□ -1.94
KTN1-217ENST00000554831 IGHV3-38A0A0C4DH36 116 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 IGHV3-53P01767 116 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 CRYGDP07320 174 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 NFE4Q86UQ8 179 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 TMEM243Q9BU79 118 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 SPANXDQ9BXN6 97 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 ITPR1Q14643 2758 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 ATMQ13315 3056 aa2.92□□□□□ -1.94
KTN1-217ENST00000554831 COL6A3P12111 3177 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 Q9H8V8 135 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 PYGO1Q9Y3Y4 419 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 RAI1Q7Z5J4 1906 aaPredicted RBP2.91□□□□□ -1.94
KTN1-217ENST00000554831 A0A0B4J2C4 111 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 GAGE5Q13069 117 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 GAGE6Q13070 117 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 CFAP126Q5VTH2 177 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 C15orf53Q8NAA6 179 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 CARD19Q96LW7 228 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 OPRPNQ99935 248 aaPredicted RBP2.91□□□□□ -1.94
KTN1-217ENST00000554831 OVOL2Q9BRP0 275 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 NOTCH1P46531 2555 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 IGLV4-3A0A075B6K6 122 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 A0A1W2PRX2 142 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 RNASE13Q5GAN3 156 aaKnown RBP2.91□□□□□ -1.94
KTN1-217ENST00000554831 TRBV10-2A0A0K0K1G8 114 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 GHRHP01286 108 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 Q6ZQT7 251 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 DCANP1Q8TF63 244 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 VSIG2Q96IQ7 327 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 A0A0J9YXY3 114 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 TCL1BO95988 128 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 ZFHX4Q86UP3 3567 aa2.91□□□□□ -1.94
KTN1-217ENST00000554831 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.9□□□□□ -1.94
KTN1-217ENST00000554831 IGKV2-29A2NJV5 120 aaPredicted RBP2.9□□□□□ -1.94
KTN1-217ENST00000554831 IGLV1-40P01703 118 aa2.9□□□□□ -1.94
KTN1-217ENST00000554831 HERV-K104P63124 156 aa2.9□□□□□ -1.94
KTN1-217ENST00000554831 STAB1Q9NY15 2570 aa2.9□□□□□ -1.94
KTN1-217ENST00000554831 TEP1Q99973 2627 aaKnown RBP2.9□□□□□ -1.94
KTN1-217ENST00000554831 Q6ZUT4 128 aa2.9□□□□□ -1.94
KTN1-217ENST00000554831 CDKN2A-AS1Q9UH64 79 aa2.9□□□□□ -1.94
KTN1-217ENST00000554831 UNC79Q9P2D8 2635 aa2.9□□□□□ -1.94
KTN1-217ENST00000554831 TRAV13-2A0A0B4J235 113 aa2.9□□□□□ -1.95
KTN1-217ENST00000554831 ACYP1P07311 99 aa2.9□□□□□ -1.95
KTN1-217ENST00000554831 PSMB8P28062 276 aa2.9□□□□□ -1.95
KTN1-217ENST00000554831 DEFB136Q30KP8 78 aa2.9□□□□□ -1.95
KTN1-217ENST00000554831 PIK3CD-AS1Q5SR53 167 aa2.9□□□□□ -1.95
KTN1-217ENST00000554831 C9orf85Q96MD7 179 aa2.9□□□□□ -1.95
KTN1-217ENST00000554831 TRAV25A0A0B4J276 109 aa2.9□□□□□ -1.95
KTN1-217ENST00000554831 KLK9Q2XQG4 91 aa2.9□□□□□ -1.95
KTN1-217ENST00000554831 TRAV26-1A0A087WT03 109 aa2.9□□□□□ -1.95
KTN1-217ENST00000554831 C19orf84I3L1E1 186 aa2.9□□□□□ -1.95
KTN1-217ENST00000554831 APRG1Q8IVJ8 170 aa2.9□□□□□ -1.95
KTN1-217ENST00000554831 SPATA25Q9BR10 227 aa2.9□□□□□ -1.95
KTN1-217ENST00000554831 ZNF580Q9UK33 172 aa2.9□□□□□ -1.95
KTN1-217ENST00000554831 IGHV3-30P01768 117 aa2.89□□□□□ -1.95
KTN1-217ENST00000554831 IGHV3-30-5P0DP03 117 aa2.89□□□□□ -1.95
KTN1-217ENST00000554831 SLURP1P55000 103 aa2.89□□□□□ -1.95
KTN1-217ENST00000554831 UBE2D3P61077 147 aa2.89□□□□□ -1.95
KTN1-217ENST00000554831 UBE2D2P62837 147 aa2.89□□□□□ -1.95
KTN1-217ENST00000554831 KIF25-AS1Q9Y6Z4 181 aa2.89□□□□□ -1.95
KTN1-217ENST00000554831 TRBV30A0A0K0K1B3 111 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms