RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 LOC730098B7Z3J9 87 aa-0.78□□□□□ -2.53
PCNX1-208ENST00000554707 M0R135 149 aa-0.78□□□□□ -2.53
PCNX1-208ENST00000554707 SCGB1A1P11684 91 aa-0.78□□□□□ -2.53
PCNX1-208ENST00000554707 CCL18P55774 89 aa-0.78□□□□□ -2.53
PCNX1-208ENST00000554707 SPAG11AQ6PDA7 123 aa-0.78□□□□□ -2.53
PCNX1-208ENST00000554707 LZICQ8WZA0 190 aa-0.78□□□□□ -2.53
PCNX1-208ENST00000554707 FAT1Q14517 4588 aa-0.78□□□□□ -2.53
PCNX1-208ENST00000554707 HECTD4Q9Y4D8 3996 aa-0.79□□□□□ -2.54
PCNX1-208ENST00000554707 DAPK1P53355 1430 aa-0.79□□□□□ -2.54
PCNX1-208ENST00000554707 TMEM2Q9UHN6 1383 aa-0.79□□□□□ -2.54
PCNX1-208ENST00000554707 CCL8P80075 99 aa-0.79□□□□□ -2.54
PCNX1-208ENST00000554707 KRTAP19-8Q3LI54 63 aa-0.79□□□□□ -2.54
PCNX1-208ENST00000554707 TSTD1Q8NFU3 115 aa-0.79□□□□□ -2.54
PCNX1-208ENST00000554707 SMIM4Q8WVI0 70 aa-0.79□□□□□ -2.54
PCNX1-208ENST00000554707 AGPAT4-IT1Q9H0P7 198 aa-0.79□□□□□ -2.54
PCNX1-208ENST00000554707 IFT172Q9UG01 1749 aa-0.79□□□□□ -2.54
PCNX1-208ENST00000554707 ERCC6L2Q5T890 1561 aa-0.79□□□□□ -2.54
PCNX1-208ENST00000554707 VWFP04275 2813 aa-0.79□□□□□ -2.54
PCNX1-208ENST00000554707 C2CD3Q4AC94 2353 aa-0.79□□□□□ -2.54
PCNX1-208ENST00000554707 CASKIN1Q8WXD9 1431 aa-0.8□□□□□ -2.54
PCNX1-208ENST00000554707 KIAA0100Q14667 2235 aaKnown RBP-0.8□□□□□ -2.54
PCNX1-208ENST00000554707 DOPEY1Q5JWR5 2465 aa-0.8□□□□□ -2.54
PCNX1-208ENST00000554707 TSPAN19P0C672 248 aa-0.8□□□□□ -2.54
PCNX1-208ENST00000554707 C10orf128Q5T292 105 aa-0.8□□□□□ -2.54
PCNX1-208ENST00000554707 KCNRGQ8N5I3 272 aa-0.8□□□□□ -2.54
PCNX1-208ENST00000554707 CHD6Q8TD26 2715 aa-0.8□□□□□ -2.54
PCNX1-208ENST00000554707 LAMA5O15230 3695 aa-0.81□□□□□ -2.54
PCNX1-208ENST00000554707 TRBV6-1A0A0K0K1D8 114 aa-0.81□□□□□ -2.54
PCNX1-208ENST00000554707 HCG22E2RYF7 251 aa-0.81□□□□□ -2.54
PCNX1-208ENST00000554707 SCIMPQ6UWF3 145 aa-0.81□□□□□ -2.54
PCNX1-208ENST00000554707 TPT1P8Q9HAU6 139 aa-0.81□□□□□ -2.54
PCNX1-208ENST00000554707 PARP14Q460N5 1801 aa-0.82□□□□□ -2.54
PCNX1-208ENST00000554707 ARPC5O15511 151 aa-0.82□□□□□ -2.54
PCNX1-208ENST00000554707 NCR2O95944 276 aa-0.82□□□□□ -2.54
PCNX1-208ENST00000554707 B2MP61769 119 aa-0.82□□□□□ -2.54
PCNX1-208ENST00000554707 PYDC1Q8WXC3 89 aa-0.82□□□□□ -2.54
PCNX1-208ENST00000554707 AQP10Q96PS8 301 aa-0.82□□□□□ -2.54
PCNX1-208ENST00000554707 CREBBPQ92793 2442 aa-0.82□□□□□ -2.54
PCNX1-208ENST00000554707 PDZD2O15018 2839 aa-0.83□□□□□ -2.54
PCNX1-208ENST00000554707 USH2AO75445 5202 aa-0.83□□□□□ -2.54
PCNX1-208ENST00000554707 BCL9LQ86UU0 1499 aa-0.83□□□□□ -2.54
PCNX1-208ENST00000554707 SIX6O95475 246 aa-0.83□□□□□ -2.54
PCNX1-208ENST00000554707 GUCA1AP43080 201 aaPredicted RBP-0.83□□□□□ -2.54
PCNX1-208ENST00000554707 RBM3P98179 157 aaKnown RBP-0.83□□□□□ -2.54
PCNX1-208ENST00000554707 PIGYQ3MUY2 71 aa-0.83□□□□□ -2.54
PCNX1-208ENST00000554707 TMEM170BQ5T4T1 132 aa-0.83□□□□□ -2.54
PCNX1-208ENST00000554707 V9GYH0 126 aa-0.83□□□□□ -2.54
PCNX1-208ENST00000554707 ALMS1Q8TCU4 4167 aa-0.83□□□□□ -2.54
PCNX1-208ENST00000554707 LRP6O75581 1613 aa-0.83□□□□□ -2.54
PCNX1-208ENST00000554707 SIPA1L3O60292 1781 aaPredicted RBP-0.83□□□□□ -2.54
PCNX1-208ENST00000554707 I3L2K1 104 aa-0.84□□□□□ -2.54
PCNX1-208ENST00000554707 COPZ1P61923 177 aa-0.84□□□□□ -2.54
PCNX1-208ENST00000554707 Q6JHZ5 121 aa-0.84□□□□□ -2.54
PCNX1-208ENST00000554707 TTC9CQ8N5M4 171 aa-0.84□□□□□ -2.54
PCNX1-208ENST00000554707 FXYD6Q9H0Q3 95 aa-0.84□□□□□ -2.54
PCNX1-208ENST00000554707 HYDINQ4G0P3 5121 aa-0.84□□□□□ -2.54
PCNX1-208ENST00000554707 APC2O95996 2303 aa-0.84□□□□□ -2.54
PCNX1-208ENST00000554707 FAT2Q9NYQ8 4349 aa-0.85□□□□□ -2.54
PCNX1-208ENST00000554707 LRRC37A3O60309 1634 aa-0.85□□□□□ -2.55
PCNX1-208ENST00000554707 TRAV13-2A0A0B4J235 113 aa-0.85□□□□□ -2.55
PCNX1-208ENST00000554707 PRG4Q92954 1404 aaPredicted RBP-0.85□□□□□ -2.55
PCNX1-208ENST00000554707 TENM2Q9NT68 2774 aa-0.85□□□□□ -2.55
PCNX1-208ENST00000554707 MRC1P22897 1456 aa-0.86□□□□□ -2.55
PCNX1-208ENST00000554707 RYR1P21817 5038 aa-0.86□□□□□ -2.55
PCNX1-208ENST00000554707 ADGRB1O14514 1584 aa-0.86□□□□□ -2.55
PCNX1-208ENST00000554707 COL6A3P12111 3177 aa-0.86□□□□□ -2.55
PCNX1-208ENST00000554707 TNFP01375 233 aa-0.86□□□□□ -2.55
PCNX1-208ENST00000554707 HIST1H1DP16402 221 aaKnown RBP-0.86□□□□□ -2.55
PCNX1-208ENST00000554707 SPRR1BP22528 89 aa-0.86□□□□□ -2.55
PCNX1-208ENST00000554707 SPRR2BP35325 72 aa-0.86□□□□□ -2.55
PCNX1-208ENST00000554707 AKAP14Q86UN6 197 aa-0.86□□□□□ -2.55
PCNX1-208ENST00000554707 COPZ2Q9P299 210 aa-0.86□□□□□ -2.55
PCNX1-208ENST00000554707 NF1P21359 2839 aa-0.86□□□□□ -2.55
PCNX1-208ENST00000554707 ANKRD30AQ9BXX3 1397 aa-0.86□□□□□ -2.55
PCNX1-208ENST00000554707 CDK5RAP2Q96SN8 1893 aa-0.86□□□□□ -2.55
PCNX1-208ENST00000554707 BSNQ9UPA5 3926 aa-0.86□□□□□ -2.55
PCNX1-208ENST00000554707 IFT140Q96RY7 1462 aa-0.86□□□□□ -2.55
PCNX1-208ENST00000554707 MAP1BP46821 2468 aaKnown RBP-0.87□□□□□ -2.55
PCNX1-208ENST00000554707 UBR4Q5T4S7 5183 aa-0.87□□□□□ -2.55
PCNX1-208ENST00000554707 MYH13Q9UKX3 1938 aa-0.87□□□□□ -2.55
PCNX1-208ENST00000554707 KIAA1109Q2LD37 5005 aa-0.87□□□□□ -2.55
PCNX1-208ENST00000554707 RPS25P62851 125 aaKnown RBP-0.87□□□□□ -2.55
PCNX1-208ENST00000554707 PLCE1Q9P212 2302 aa-0.87□□□□□ -2.55
PCNX1-208ENST00000554707 ZNF518AQ6AHZ1 1483 aa-0.87□□□□□ -2.55
PCNX1-208ENST00000554707 HIVEP1P15822 2718 aa-0.87□□□□□ -2.55
PCNX1-208ENST00000554707 USF3Q68DE3 2245 aa-0.88□□□□□ -2.55
PCNX1-208ENST00000554707 LAMC1P11047 1609 aa-0.88□□□□□ -2.55
PCNX1-208ENST00000554707 SMCO1Q147U7 214 aa-0.88□□□□□ -2.55
PCNX1-208ENST00000554707 ALX1Q15699 326 aa-0.88□□□□□ -2.55
PCNX1-208ENST00000554707 SDF2Q99470 211 aa-0.88□□□□□ -2.55
PCNX1-208ENST00000554707 PIEZO2Q9H5I5 2752 aa-0.88□□□□□ -2.55
PCNX1-208ENST00000554707 FHAD1B1AJZ9 1412 aa-0.89□□□□□ -2.55
PCNX1-208ENST00000554707 PIGBOS1A0A0B4J2F0 54 aa-0.89□□□□□ -2.55
PCNX1-208ENST00000554707 COX6B1P14854 86 aa-0.89□□□□□ -2.55
PCNX1-208ENST00000554707 DR1Q01658 176 aa-0.89□□□□□ -2.55
PCNX1-208ENST00000554707 COX17Q14061 63 aa-0.89□□□□□ -2.55
PCNX1-208ENST00000554707 TCEAL4Q96EI5 215 aa-0.89□□□□□ -2.55
PCNX1-208ENST00000554707 PDCD10Q9BUL8 212 aa-0.89□□□□□ -2.55
PCNX1-208ENST00000554707 LENEPQ9Y5L5 61 aa-0.89□□□□□ -2.55
PCNX1-208ENST00000554707 LRP1BQ9NZR2 4599 aa-0.89□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms