RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 KIAA1644Q3SXP7 199 aa7.59□□□□□ -1.19
RAB5B-208ENST00000550283 OR10J3Q5JRS4 329 aa7.59□□□□□ -1.19
RAB5B-208ENST00000550283 Q6ZRN7 208 aaPredicted RBP7.59□□□□□ -1.19
RAB5B-208ENST00000550283 C6orf223Q8N319 242 aa7.59□□□□□ -1.19
RAB5B-208ENST00000550283 ATP6V0E2Q8NHE4 81 aa7.59□□□□□ -1.19
RAB5B-208ENST00000550283 RHODO00212 210 aa7.58□□□□□ -1.2
RAB5B-208ENST00000550283 NTF3P20783 257 aa7.58□□□□□ -1.2
RAB5B-208ENST00000550283 TIRAPP58753 221 aa7.58□□□□□ -1.2
RAB5B-208ENST00000550283 ZNF56Q15929 161 aa7.58□□□□□ -1.2
RAB5B-208ENST00000550283 PYY3Q5JQD4 70 aa7.58□□□□□ -1.2
RAB5B-208ENST00000550283 NEXN-AS1Q8NBZ9 246 aa7.58□□□□□ -1.2
RAB5B-208ENST00000550283 IGHV3-38A0A0C4DH36 116 aa7.57□□□□□ -1.2
RAB5B-208ENST00000550283 A0A1B0GUT8 65 aa7.57□□□□□ -1.2
RAB5B-208ENST00000550283 A0A1B0GW15 77 aa7.57□□□□□ -1.2
RAB5B-208ENST00000550283 SERF1AO75920 110 aa7.57□□□□□ -1.2
RAB5B-208ENST00000550283 DNAH10OSP0CZ25 163 aa7.57□□□□□ -1.2
RAB5B-208ENST00000550283 ESDP10768 282 aa7.57□□□□□ -1.2
RAB5B-208ENST00000550283 LORP23490 312 aaPredicted RBP7.57□□□□□ -1.2
RAB5B-208ENST00000550283 UBE2D3P61077 147 aa7.57□□□□□ -1.2
RAB5B-208ENST00000550283 UBE2D2P62837 147 aa7.57□□□□□ -1.2
RAB5B-208ENST00000550283 S100A12P80511 92 aa7.57□□□□□ -1.2
RAB5B-208ENST00000550283 DNAJC30Q96LL9 226 aa7.57□□□□□ -1.2
RAB5B-208ENST00000550283 GTSF1LQ9H1H1 148 aa7.57□□□□□ -1.2
RAB5B-208ENST00000550283 F2Z2F3 143 aa7.56□□□□□ -1.2
RAB5B-208ENST00000550283 GAS8-AS1O95177 125 aa7.56□□□□□ -1.2
RAB5B-208ENST00000550283 IGHV3-30P01768 117 aa7.56□□□□□ -1.2
RAB5B-208ENST00000550283 IGHV3-33P01772 117 aa7.56□□□□□ -1.2
RAB5B-208ENST00000550283 IGHV3-30-3P0DP02 117 aa7.56□□□□□ -1.2
RAB5B-208ENST00000550283 IGHV3-30-5P0DP03 117 aa7.56□□□□□ -1.2
RAB5B-208ENST00000550283 FUSP35637 526 aaKnown RBP eCLIP7.56□□□□□ -1.2
RAB5B-208ENST00000550283 LELP1Q5T871 98 aa7.56□□□□□ -1.2
RAB5B-208ENST00000550283 SUMO4Q6EEV6 95 aa7.56□□□□□ -1.2
RAB5B-208ENST00000550283 DEFB104AQ8WTQ1 72 aa7.56□□□□□ -1.2
RAB5B-208ENST00000550283 CNFNQ9BYD5 112 aa7.56□□□□□ -1.2
RAB5B-208ENST00000550283 KIAA1109Q2LD37 5005 aa7.56□□□□□ -1.2
RAB5B-208ENST00000550283 DNAH5Q8TE73 4624 aa7.55□□□□□ -1.2
RAB5B-208ENST00000550283 TRAV26-2A0A0B4J265 109 aa7.55□□□□□ -1.2
RAB5B-208ENST00000550283 M0QY20 66 aa7.55□□□□□ -1.2
RAB5B-208ENST00000550283 NUPR1O60356 82 aa7.55□□□□□ -1.2
RAB5B-208ENST00000550283 MGPP08493 103 aa7.55□□□□□ -1.2
RAB5B-208ENST00000550283 JOSD1Q15040 202 aaPredicted RBP7.55□□□□□ -1.2
RAB5B-208ENST00000550283 NTM-AS1Q6ZSK4 140 aa7.55□□□□□ -1.2
RAB5B-208ENST00000550283 LINC00336Q6ZUF6 198 aa7.55□□□□□ -1.2
RAB5B-208ENST00000550283 AP1S3Q96PC3 154 aa7.55□□□□□ -1.2
RAB5B-208ENST00000550283 ALKBH7Q9BT30 221 aaPredicted RBP7.55□□□□□ -1.2
RAB5B-208ENST00000550283 F5H697 171 aa7.54□□□□□ -1.2
RAB5B-208ENST00000550283 LINC00310P59036 64 aa7.54□□□□□ -1.2
RAB5B-208ENST00000550283 CACNG7P62955 275 aa7.54□□□□□ -1.2
RAB5B-208ENST00000550283 IQCJQ1A5X6 159 aa7.54□□□□□ -1.2
RAB5B-208ENST00000550283 TTC32Q5I0X7 151 aa7.54□□□□□ -1.2
RAB5B-208ENST00000550283 SH2D6Q7Z4S9 175 aa7.54□□□□□ -1.2
RAB5B-208ENST00000550283 GATD1Q8NB37 220 aa7.54□□□□□ -1.2
RAB5B-208ENST00000550283 C18orf32Q8TCD1 76 aa7.54□□□□□ -1.2
RAB5B-208ENST00000550283 LRP1BQ9NZR2 4599 aa7.53□□□□□ -1.2
RAB5B-208ENST00000550283 TRBV7-3A0A075B6L6 115 aa7.53□□□□□ -1.2
RAB5B-208ENST00000550283 TRBV10-1A0A0K0K1A3 114 aa7.53□□□□□ -1.2
RAB5B-208ENST00000550283 PMCHP20382 165 aa7.53□□□□□ -1.2
RAB5B-208ENST00000550283 KRTAP10-2P60368 255 aa7.53□□□□□ -1.2
RAB5B-208ENST00000550283 TWIST1Q15672 202 aa7.53□□□□□ -1.2
RAB5B-208ENST00000550283 LINC01556Q5JQF7 62 aa7.53□□□□□ -1.2
RAB5B-208ENST00000550283 DAZ4Q86SG3 579 aaKnown RBP7.53□□□□□ -1.2
RAB5B-208ENST00000550283 DAZ3Q9NR90 486 aaKnown RBP7.53□□□□□ -1.2
RAB5B-208ENST00000550283 SCGB1D1O95968 90 aa7.52□□□□□ -1.21
RAB5B-208ENST00000550283 AMTP48728 403 aa7.52□□□□□ -1.21
RAB5B-208ENST00000550283 CDPF1Q6NVV7 123 aa7.52□□□□□ -1.21
RAB5B-208ENST00000550283 RNASEKQ6P5S7 137 aaKnown RBP7.52□□□□□ -1.21
RAB5B-208ENST00000550283 RPL39LQ96EH5 51 aaKnown RBP7.52□□□□□ -1.21
RAB5B-208ENST00000550283 HSBP1O75506 76 aa7.51□□□□□ -1.21
RAB5B-208ENST00000550283 RPL36AP83881 106 aaKnown RBP7.51□□□□□ -1.21
RAB5B-208ENST00000550283 NIT1Q86X76 327 aa7.51□□□□□ -1.21
RAB5B-208ENST00000550283 RPL36ALQ969Q0 106 aaKnown RBP7.51□□□□□ -1.21
RAB5B-208ENST00000550283 RNF185Q96GF1 192 aa7.51□□□□□ -1.21
RAB5B-208ENST00000550283 DPH3P1Q9H4G8 78 aa7.51□□□□□ -1.21
RAB5B-208ENST00000550283 TRAV8-6A0A0B4J262 113 aa7.5□□□□□ -1.21
RAB5B-208ENST00000550283 IBA57-AS1B1ANH7 110 aa7.5□□□□□ -1.21
RAB5B-208ENST00000550283 SMIM17P0DL12 118 aa7.5□□□□□ -1.21
RAB5B-208ENST00000550283 Q9HAA7 133 aa7.5□□□□□ -1.21
RAB5B-208ENST00000550283 TRBV6-8A0A0A6YYG3 113 aa7.49□□□□□ -1.21
RAB5B-208ENST00000550283 TSTD3H0UI37 97 aa7.49□□□□□ -1.21
RAB5B-208ENST00000550283 KRTDAPP60985 99 aa7.49□□□□□ -1.21
RAB5B-208ENST00000550283 PKIAP61925 76 aa7.49□□□□□ -1.21
RAB5B-208ENST00000550283 WFDC2Q14508 124 aa7.49□□□□□ -1.21
RAB5B-208ENST00000550283 MAPKAPK5-AS1Q8N8E1 139 aa7.49□□□□□ -1.21
RAB5B-208ENST00000550283 CHCHD1Q96BP2 118 aaKnown RBP7.49□□□□□ -1.21
RAB5B-208ENST00000550283 SMKR1H3BMG3 65 aa7.48□□□□□ -1.21
RAB5B-208ENST00000550283 APOBP04114 4563 aaKnown RBP7.48□□□□□ -1.21
RAB5B-208ENST00000550283 MPV17L2Q567V2 206 aa7.48□□□□□ -1.21
RAB5B-208ENST00000550283 FAM104BQ5XKR9 115 aa7.48□□□□□ -1.21
RAB5B-208ENST00000550283 FAM19A2Q8N3H0 131 aa7.48□□□□□ -1.21
RAB5B-208ENST00000550283 LRCOL1A6NCL2 159 aa7.47□□□□□ -1.21
RAB5B-208ENST00000550283 MRPL51Q4U2R6 128 aaKnown RBP7.47□□□□□ -1.21
RAB5B-208ENST00000550283 SMIM15Q7Z3B0 74 aa7.47□□□□□ -1.21
RAB5B-208ENST00000550283 SPATA12Q7Z6I5 190 aa7.47□□□□□ -1.21
RAB5B-208ENST00000550283 AMN1Q8IY45 258 aa7.47□□□□□ -1.21
RAB5B-208ENST00000550283 Q8N976 141 aa7.47□□□□□ -1.21
RAB5B-208ENST00000550283 A0A087WTM6 91 aa7.46□□□□□ -1.22
RAB5B-208ENST00000550283 NCR2O95944 276 aa7.46□□□□□ -1.22
RAB5B-208ENST00000550283 BTF3P20290 206 aaKnown RBP7.46□□□□□ -1.22
RAB5B-208ENST00000550283 RAB4AP20338 218 aa7.46□□□□□ -1.22
RAB5B-208ENST00000550283 GAGE6Q13070 117 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms