RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 CCL19Q99731 98 aa0.89□□□□□ -2.27
CCDC38-208ENST00000549876 SNHG12Q9BXW3 62 aa0.89□□□□□ -2.27
CCDC38-208ENST00000549876 SCP2D1Q9UJQ7 156 aa0.89□□□□□ -2.27
CCDC38-208ENST00000549876 LENEPQ9Y5L5 61 aa0.89□□□□□ -2.27
CCDC38-208ENST00000549876 V9GYS6 101 aa0.89□□□□□ -2.27
CCDC38-208ENST00000549876 V9GYV3 84 aa0.89□□□□□ -2.27
CCDC38-208ENST00000549876 ASCC3Q8N3C0 2202 aaKnown RBP0.89□□□□□ -2.27
CCDC38-208ENST00000549876 ABCA4P78363 2273 aa0.89□□□□□ -2.27
CCDC38-208ENST00000549876 NCOA6Q14686 2063 aaPredicted RBP0.88□□□□□ -2.27
CCDC38-208ENST00000549876 ADGRL2O95490 1459 aa0.88□□□□□ -2.27
CCDC38-208ENST00000549876 MAGI1Q96QZ7 1491 aaPredicted RBP0.88□□□□□ -2.27
CCDC38-208ENST00000549876 ARFGEF1Q9Y6D6 1849 aa0.88□□□□□ -2.27
CCDC38-208ENST00000549876 LOC285095A0A1B0GVY8 99 aa0.88□□□□□ -2.27
CCDC38-208ENST00000549876 KRTAP10-4P60372 401 aaPredicted RBP0.88□□□□□ -2.27
CCDC38-208ENST00000549876 SPINK13Q1W4C9 94 aa0.88□□□□□ -2.27
CCDC38-208ENST00000549876 C10orf128Q5T292 105 aa0.88□□□□□ -2.27
CCDC38-208ENST00000549876 Q86TA4 180 aa0.88□□□□□ -2.27
CCDC38-208ENST00000549876 MGST2Q99735 147 aa0.88□□□□□ -2.27
CCDC38-208ENST00000549876 Q9H521 79 aa0.88□□□□□ -2.27
CCDC38-208ENST00000549876 TMEM14BQ9NUH8 114 aa0.88□□□□□ -2.27
CCDC38-208ENST00000549876 CC2D2AQ9P2K1 1620 aa0.88□□□□□ -2.27
CCDC38-208ENST00000549876 PI4KAP42356 2102 aa0.88□□□□□ -2.27
CCDC38-208ENST00000549876 TET3O43151 1660 aa0.88□□□□□ -2.27
CCDC38-208ENST00000549876 MAP2P11137 1827 aaKnown RBP0.87□□□□□ -2.27
CCDC38-208ENST00000549876 PSME4Q14997 1843 aa0.87□□□□□ -2.27
CCDC38-208ENST00000549876 CHD1O14646 1710 aa0.87□□□□□ -2.27
CCDC38-208ENST00000549876 TRBV7-3A0A075B6L6 115 aa0.87□□□□□ -2.27
CCDC38-208ENST00000549876 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.87□□□□□ -2.27
CCDC38-208ENST00000549876 CLPSL1A2RUU4 121 aa0.87□□□□□ -2.27
CCDC38-208ENST00000549876 NDUFC1O43677 76 aa0.87□□□□□ -2.27
CCDC38-208ENST00000549876 SNCAP37840 140 aa0.87□□□□□ -2.27
CCDC38-208ENST00000549876 GNG11P61952 73 aa0.87□□□□□ -2.27
CCDC38-208ENST00000549876 UBA52P62987 128 aaKnown RBP0.87□□□□□ -2.27
CCDC38-208ENST00000549876 C6orf52Q5T4I8 152 aa0.87□□□□□ -2.27
CCDC38-208ENST00000549876 FAM167A-AS1Q96KT0 104 aa0.87□□□□□ -2.27
CCDC38-208ENST00000549876 UQCR10Q9UDW1 63 aa0.87□□□□□ -2.27
CCDC38-208ENST00000549876 LOC285556D6RIA3 1793 aa0.87□□□□□ -2.27
CCDC38-208ENST00000549876 SIPA1L3O60292 1781 aaPredicted RBP0.87□□□□□ -2.27
CCDC38-208ENST00000549876 ABCC5O15440 1437 aa0.87□□□□□ -2.27
CCDC38-208ENST00000549876 KIAA1551Q9HCM1 1747 aa0.86□□□□□ -2.27
CCDC38-208ENST00000549876 COL6A6A6NMZ7 2263 aa0.86□□□□□ -2.27
CCDC38-208ENST00000549876 EDDM3BP56851 147 aa0.86□□□□□ -2.27
CCDC38-208ENST00000549876 Q0VG73 95 aa0.86□□□□□ -2.27
CCDC38-208ENST00000549876 AMELXQ99217 191 aa0.86□□□□□ -2.27
CCDC38-208ENST00000549876 VAMP8Q9BV40 100 aa0.86□□□□□ -2.27
CCDC38-208ENST00000549876 DYNLRB1Q9NP97 96 aa0.86□□□□□ -2.27
CCDC38-208ENST00000549876 LINC00474Q9P2X8 69 aa0.86□□□□□ -2.27
CCDC38-208ENST00000549876 R4GMQ9 66 aa0.86□□□□□ -2.27
CCDC38-208ENST00000549876 BAZ1AQ9NRL2 1556 aaPredicted RBP0.86□□□□□ -2.27
CCDC38-208ENST00000549876 PRDM2Q13029 1718 aa0.86□□□□□ -2.27
CCDC38-208ENST00000549876 RAPGEF2Q9Y4G8 1499 aa0.86□□□□□ -2.27
CCDC38-208ENST00000549876 PRDM15P57071 1507 aaPredicted RBP0.85□□□□□ -2.27
CCDC38-208ENST00000549876 A0A1W2PPM0 123 aa0.85□□□□□ -2.27
CCDC38-208ENST00000549876 ATOX1O00244 68 aa0.85□□□□□ -2.27
CCDC38-208ENST00000549876 GNGT2O14610 69 aa0.85□□□□□ -2.27
CCDC38-208ENST00000549876 COX6CP09669 75 aa0.85□□□□□ -2.27
CCDC38-208ENST00000549876 ASIPP42127 132 aa0.85□□□□□ -2.27
CCDC38-208ENST00000549876 FXYD6P3P58550 94 aa0.85□□□□□ -2.27
CCDC38-208ENST00000549876 SPAG11BQ08648 103 aa0.85□□□□□ -2.27
CCDC38-208ENST00000549876 SPAG11AQ6PDA7 123 aa0.85□□□□□ -2.27
CCDC38-208ENST00000549876 BAGE3Q86Y29 109 aa0.85□□□□□ -2.27
CCDC38-208ENST00000549876 WFDC6Q9BQY6 131 aa0.85□□□□□ -2.27
CCDC38-208ENST00000549876 DIP2CQ9Y2E4 1556 aa0.85□□□□□ -2.27
CCDC38-208ENST00000549876 LAMC3Q9Y6N6 1575 aa0.85□□□□□ -2.27
CCDC38-208ENST00000549876 DOCK11Q5JSL3 2073 aa0.85□□□□□ -2.27
CCDC38-208ENST00000549876 A0A087WTM6 91 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 A0A096LNT2 108 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 hADV29S1A0JD25 119 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 CRYM-AS1A6NIL9 109 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 SFT2D2O95562 160 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 PPP1R17O96001 155 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 GYPAP02724 150 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 MT-ATP8P03928 68 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 CCL18P55774 89 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 UBE2D3P61077 147 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 UBE2D2P62837 147 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 Q5VV11 94 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 Q8N6K4 173 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 PMCHL2Q9BQD1 86 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 NDUFA4L2Q9NRX3 87 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 PRO1854Q9UHT4 67 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 V9GYH0 126 aa0.84□□□□□ -2.27
CCDC38-208ENST00000549876 MYOM1P52179 1685 aa0.84□□□□□ -2.28
CCDC38-208ENST00000549876 MARF1Q9Y4F3 1742 aaKnown RBP0.84□□□□□ -2.28
CCDC38-208ENST00000549876 IGLC1P0CG04 106 aa0.83□□□□□ -2.28
CCDC38-208ENST00000549876 SEC11AP67812 179 aa0.83□□□□□ -2.28
CCDC38-208ENST00000549876 TSLPQ969D9 159 aa0.83□□□□□ -2.28
CCDC38-208ENST00000549876 TRGV9Q99603 122 aa0.83□□□□□ -2.28
CCDC38-208ENST00000549876 MANBALQ9NQG1 85 aa0.83□□□□□ -2.28
CCDC38-208ENST00000549876 GOLGA3Q08378 1498 aa0.83□□□□□ -2.28
CCDC38-208ENST00000549876 CNTRLQ7Z7A1 2325 aa0.83□□□□□ -2.28
CCDC38-208ENST00000549876 ABCC3O15438 1527 aa0.83□□□□□ -2.28
CCDC38-208ENST00000549876 ARHGEF12Q9NZN5 1544 aa0.83□□□□□ -2.28
CCDC38-208ENST00000549876 ANKRD36BQ8N2N9 1353 aa0.83□□□□□ -2.28
CCDC38-208ENST00000549876 MED13LQ71F56 2210 aa0.83□□□□□ -2.28
CCDC38-208ENST00000549876 SBF2Q86WG5 1849 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 MRC1P22897 1456 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 SHANK2Q9UPX8 1470 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 TRAV22A0A0B4J277 110 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 TRBV7-7A0A0K0K1E9 115 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms