RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 Q6ZSV7 163 aa10.34□□□□□ -0.75
RAPGEF3-218ENST00000548919 FBN2P35556 2912 aa10.34□□□□□ -0.75
RAPGEF3-218ENST00000548919 DOPEY1Q5JWR5 2465 aa10.34□□□□□ -0.75
RAPGEF3-218ENST00000548919 TRGV11A0A075B6L2 103 aa10.34□□□□□ -0.75
RAPGEF3-218ENST00000548919 TRAV26-1A0A087WT03 109 aa10.34□□□□□ -0.75
RAPGEF3-218ENST00000548919 DEFB136Q30KP8 78 aa10.34□□□□□ -0.75
RAPGEF3-218ENST00000548919 LITAFQ99732 161 aa10.34□□□□□ -0.75
RAPGEF3-218ENST00000548919 Q5PR19 223 aa10.33□□□□□ -0.76
RAPGEF3-218ENST00000548919 CLUHP3Q96NS8 147 aa10.33□□□□□ -0.76
RAPGEF3-218ENST00000548919 TRIAP1O43715 76 aa10.32□□□□□ -0.76
RAPGEF3-218ENST00000548919 C18orf65Q6ZTR6 163 aa10.32□□□□□ -0.76
RAPGEF3-218ENST00000548919 NTN5Q8WTR8 489 aaPredicted RBP10.32□□□□□ -0.76
RAPGEF3-218ENST00000548919 TNFRSF18Q9Y5U5 241 aa10.32□□□□□ -0.76
RAPGEF3-218ENST00000548919 IGSF10Q6WRI0 2623 aa10.32□□□□□ -0.76
RAPGEF3-218ENST00000548919 MYO9AB2RTY4 2548 aa10.32□□□□□ -0.76
RAPGEF3-218ENST00000548919 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.32□□□□□ -0.76
RAPGEF3-218ENST00000548919 IGKV2-29A2NJV5 120 aaPredicted RBP10.32□□□□□ -0.76
RAPGEF3-218ENST00000548919 DEFB131AP59861 70 aa10.32□□□□□ -0.76
RAPGEF3-218ENST00000548919 MRPS36P82909 103 aaKnown RBP10.32□□□□□ -0.76
RAPGEF3-218ENST00000548919 PRORYQ9H606 182 aa10.32□□□□□ -0.76
RAPGEF3-218ENST00000548919 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.31□□□□□ -0.76
RAPGEF3-218ENST00000548919 IGHV3-38A0A0C4DH36 116 aa10.31□□□□□ -0.76
RAPGEF3-218ENST00000548919 RBMY1BA6NDE4 496 aaKnown RBP10.31□□□□□ -0.76
RAPGEF3-218ENST00000548919 RBMY1EA6NEQ0 496 aaKnown RBP10.31□□□□□ -0.76
RAPGEF3-218ENST00000548919 RBMY1DP0C7P1 496 aaKnown RBP10.31□□□□□ -0.76
RAPGEF3-218ENST00000548919 SLURP1P55000 103 aa10.31□□□□□ -0.76
RAPGEF3-218ENST00000548919 HIST2H2BDQ6DRA6 164 aa10.31□□□□□ -0.76
RAPGEF3-218ENST00000548919 DUX3Q96PT4 197 aa10.31□□□□□ -0.76
RAPGEF3-218ENST00000548919 TEX15Q9BXT5 2789 aa10.31□□□□□ -0.76
RAPGEF3-218ENST00000548919 NDUFA12Q9UI09 145 aa10.31□□□□□ -0.76
RAPGEF3-218ENST00000548919 PYGO1Q9Y3Y4 419 aa10.31□□□□□ -0.76
RAPGEF3-218ENST00000548919 LINC01620Q4KN68 170 aa10.31□□□□□ -0.76
RAPGEF3-218ENST00000548919 TEX49A0A1B0GTD5 131 aa10.3□□□□□ -0.76
RAPGEF3-218ENST00000548919 ATXN8Q156A1 80 aa10.3□□□□□ -0.76
RAPGEF3-218ENST00000548919 CHD6Q8TD26 2715 aa10.3□□□□□ -0.76
RAPGEF3-218ENST00000548919 IGHV1-58A0A0C4DH39 117 aa10.3□□□□□ -0.76
RAPGEF3-218ENST00000548919 AKAP9Q99996 3911 aa10.3□□□□□ -0.76
RAPGEF3-218ENST00000548919 DAND5Q8N907 189 aa10.29□□□□□ -0.76
RAPGEF3-218ENST00000548919 CHCHD7Q9BUK0 85 aa10.29□□□□□ -0.76
RAPGEF3-218ENST00000548919 LINC00467Q9BRT7 94 aa10.29□□□□□ -0.76
RAPGEF3-218ENST00000548919 NIPBLQ6KC79 2804 aaeCLIP10.28□□□□□ -0.76
RAPGEF3-218ENST00000548919 RNF183Q96D59 192 aa10.28□□□□□ -0.76
RAPGEF3-218ENST00000548919 VSIG2Q96IQ7 327 aa10.28□□□□□ -0.76
RAPGEF3-218ENST00000548919 UBE2D4Q9Y2X8 147 aa10.28□□□□□ -0.76
RAPGEF3-218ENST00000548919 H3BMM0 161 aa10.27□□□□□ -0.76
RAPGEF3-218ENST00000548919 TRBV30A0A0K0K1B3 111 aa10.27□□□□□ -0.77
RAPGEF3-218ENST00000548919 TMEM89A2RUT3 159 aa10.27□□□□□ -0.77
RAPGEF3-218ENST00000548919 ICOSQ9Y6W8 199 aa10.27□□□□□ -0.77
RAPGEF3-218ENST00000548919 TMEM262E9PQX1 116 aa10.26□□□□□ -0.77
RAPGEF3-218ENST00000548919 CRLF1O75462 422 aa10.26□□□□□ -0.77
RAPGEF3-218ENST00000548919 GATA3P23771 443 aa10.26□□□□□ -0.77
RAPGEF3-218ENST00000548919 CLEC2BQ92478 149 aa10.26□□□□□ -0.77
RAPGEF3-218ENST00000548919 ZNF702PQ9H963 129 aa10.26□□□□□ -0.77
RAPGEF3-218ENST00000548919 RNF152Q8N8N0 203 aa10.26□□□□□ -0.77
RAPGEF3-218ENST00000548919 UBE2E2Q96LR5 201 aa10.26□□□□□ -0.77
RAPGEF3-218ENST00000548919 ACACBO00763 2458 aa10.26□□□□□ -0.77
RAPGEF3-218ENST00000548919 TINCRA0A1B0GVN0 87 aa10.26□□□□□ -0.77
RAPGEF3-218ENST00000548919 MIAQ16674 131 aa10.26□□□□□ -0.77
RAPGEF3-218ENST00000548919 LINC01356Q8N9X3 169 aa10.26□□□□□ -0.77
RAPGEF3-218ENST00000548919 EDA2RQ9HAV5 297 aa10.26□□□□□ -0.77
RAPGEF3-218ENST00000548919 VPREB3Q9UKI3 123 aa10.26□□□□□ -0.77
RAPGEF3-218ENST00000548919 CACNA1AO00555 2505 aa10.25□□□□□ -0.77
RAPGEF3-218ENST00000548919 FAM208BQ5VWN6 2430 aa10.25□□□□□ -0.77
RAPGEF3-218ENST00000548919 NF1P21359 2839 aa10.25□□□□□ -0.77
RAPGEF3-218ENST00000548919 M0QXV9 152 aa10.25□□□□□ -0.77
RAPGEF3-218ENST00000548919 ZFAND6Q6FIF0 208 aa10.25□□□□□ -0.77
RAPGEF3-218ENST00000548919 TMEM61Q8N0U2 210 aa10.25□□□□□ -0.77
RAPGEF3-218ENST00000548919 CDKN2A-AS1Q9UH64 79 aa10.25□□□□□ -0.77
RAPGEF3-218ENST00000548919 PIEZO1Q92508 2521 aa10.25□□□□□ -0.77
RAPGEF3-218ENST00000548919 NOTCH3Q9UM47 2321 aa10.25□□□□□ -0.77
RAPGEF3-218ENST00000548919 TRAV4A0A0B4J268 109 aa10.25□□□□□ -0.77
RAPGEF3-218ENST00000548919 TRBV10-2A0A0K0K1G8 114 aa10.25□□□□□ -0.77
RAPGEF3-218ENST00000548919 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.25□□□□□ -0.77
RAPGEF3-218ENST00000548919 CITED1Q99966 193 aa10.25□□□□□ -0.77
RAPGEF3-218ENST00000548919 SPANXDQ9BXN6 97 aa10.25□□□□□ -0.77
RAPGEF3-218ENST00000548919 SPANXCQ9NY87 97 aa10.25□□□□□ -0.77
RAPGEF3-218ENST00000548919 TEX29Q8N6K0 151 aa10.24□□□□□ -0.77
RAPGEF3-218ENST00000548919 LINC01587Q99440 93 aa10.24□□□□□ -0.77
RAPGEF3-218ENST00000548919 ANAPC13Q9BS18 74 aa10.24□□□□□ -0.77
RAPGEF3-218ENST00000548919 H7C423 109 aa10.24□□□□□ -0.77
RAPGEF3-218ENST00000548919 SPANXA1Q9NS26 97 aa10.24□□□□□ -0.77
RAPGEF3-218ENST00000548919 ABCA12Q86UK0 2595 aa10.23□□□□□ -0.77
RAPGEF3-218ENST00000548919 ZNF415Q09FC8 603 aa10.23□□□□□ -0.77
RAPGEF3-218ENST00000548919 C2orf82Q6UX34 121 aa10.23□□□□□ -0.77
RAPGEF3-218ENST00000548919 TLN2Q9Y4G6 2542 aa10.23□□□□□ -0.77
RAPGEF3-218ENST00000548919 WNK1Q9H4A3 2382 aa10.23□□□□□ -0.77
RAPGEF3-218ENST00000548919 EPG5Q9HCE0 2579 aa10.23□□□□□ -0.77
RAPGEF3-218ENST00000548919 A0A0U1RRA0 63 aa10.22□□□□□ -0.77
RAPGEF3-218ENST00000548919 COX6A2Q02221 97 aa10.22□□□□□ -0.77
RAPGEF3-218ENST00000548919 C11orf72Q8NBR9 251 aa10.22□□□□□ -0.77
RAPGEF3-218ENST00000548919 ZNF625Q96I27 306 aaPredicted RBP10.22□□□□□ -0.77
RAPGEF3-218ENST00000548919 ZNF469Q96JG9 3925 aaPredicted RBP10.22□□□□□ -0.77
RAPGEF3-218ENST00000548919 C2CD3Q4AC94 2353 aa10.22□□□□□ -0.77
RAPGEF3-218ENST00000548919 RPL13AP40429 203 aaKnown RBP10.22□□□□□ -0.77
RAPGEF3-218ENST00000548919 KHDC1LQ5JSQ8 128 aa10.22□□□□□ -0.77
RAPGEF3-218ENST00000548919 LRRK2Q5S007 2527 aa10.22□□□□□ -0.77
RAPGEF3-218ENST00000548919 UBE2WQ96B02 151 aa10.21□□□□□ -0.77
RAPGEF3-218ENST00000548919 TRAV8-4A0A0B4J246 113 aa10.21□□□□□ -0.78
RAPGEF3-218ENST00000548919 SNCGO76070 127 aa10.21□□□□□ -0.78
RAPGEF3-218ENST00000548919 NDUFA7O95182 113 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms