RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 LINC01545Q5VT33 79 aa6.6□□□□□ -1.35
CLIP1-218ENST00000545889 CEND1Q8N111 149 aa6.6□□□□□ -1.35
CLIP1-218ENST00000545889 OVOL2Q9BRP0 275 aa6.6□□□□□ -1.35
CLIP1-218ENST00000545889 DKK2Q9UBU2 259 aa6.6□□□□□ -1.35
CLIP1-218ENST00000545889 UBE2AP49459 152 aa6.6□□□□□ -1.35
CLIP1-218ENST00000545889 GTSF1Q8WW33 167 aa6.6□□□□□ -1.35
CLIP1-218ENST00000545889 DSCAML1Q8TD84 2053 aa6.6□□□□□ -1.35
CLIP1-218ENST00000545889 DCHS1Q96JQ0 3298 aa6.6□□□□□ -1.35
CLIP1-218ENST00000545889 C9JAW5 83 aa6.6□□□□□ -1.35
CLIP1-218ENST00000545889 CTSGP08311 255 aa6.6□□□□□ -1.35
CLIP1-218ENST00000545889 KALRNO60229 2985 aa6.6□□□□□ -1.35
CLIP1-218ENST00000545889 ASPMQ8IZT6 3477 aa6.6□□□□□ -1.35
CLIP1-218ENST00000545889 IGLV11-55A0A075B6I3 123 aa6.59□□□□□ -1.35
CLIP1-218ENST00000545889 PRSS46E5RG02 174 aa6.59□□□□□ -1.35
CLIP1-218ENST00000545889 HERVK_113P63121 156 aa6.59□□□□□ -1.35
CLIP1-218ENST00000545889 C14orf177Q52M58 125 aa6.59□□□□□ -1.35
CLIP1-218ENST00000545889 TMEM141Q96I45 108 aa6.59□□□□□ -1.35
CLIP1-218ENST00000545889 PRO0255Q9UI72 69 aa6.59□□□□□ -1.35
CLIP1-218ENST00000545889 HCFC1P51610 2035 aa6.59□□□□□ -1.35
CLIP1-218ENST00000545889 RAI1Q7Z5J4 1906 aaPredicted RBP6.59□□□□□ -1.35
CLIP1-218ENST00000545889 LRCOL1A6NCL2 159 aa6.59□□□□□ -1.35
CLIP1-218ENST00000545889 DYNAPQ8N1N2 210 aa6.59□□□□□ -1.35
CLIP1-218ENST00000545889 PRB2P02812 416 aaPredicted RBP6.59□□□□□ -1.35
CLIP1-218ENST00000545889 RNASE13Q5GAN3 156 aaKnown RBP6.59□□□□□ -1.35
CLIP1-218ENST00000545889 FAM104BQ5XKR9 115 aa6.59□□□□□ -1.35
CLIP1-218ENST00000545889 TRAV26-2A0A0B4J265 109 aa6.59□□□□□ -1.36
CLIP1-218ENST00000545889 GDF5OSQ5U4N7 250 aa6.59□□□□□ -1.36
CLIP1-218ENST00000545889 ZNF492Q9P255 531 aa6.59□□□□□ -1.36
CLIP1-218ENST00000545889 GFRA4Q9GZZ7 299 aa6.58□□□□□ -1.36
CLIP1-218ENST00000545889 NDUFA12Q9UI09 145 aa6.58□□□□□ -1.36
CLIP1-218ENST00000545889 COL12A1Q99715 3063 aa6.58□□□□□ -1.36
CLIP1-218ENST00000545889 K7EIM0 57 aa6.58□□□□□ -1.36
CLIP1-218ENST00000545889 COX7A2LO14548 114 aa6.58□□□□□ -1.36
CLIP1-218ENST00000545889 BRWD1-AS2P59051 145 aa6.57□□□□□ -1.36
CLIP1-218ENST00000545889 C17orf77Q96MU5 243 aa6.57□□□□□ -1.36
CLIP1-218ENST00000545889 IGKV2-24A0A0C4DH68 120 aa6.57□□□□□ -1.36
CLIP1-218ENST00000545889 IGKV1-17P01599 117 aa6.57□□□□□ -1.36
CLIP1-218ENST00000545889 SMR3AQ99954 134 aa6.57□□□□□ -1.36
CLIP1-218ENST00000545889 LAMA5O15230 3695 aa6.57□□□□□ -1.36
CLIP1-218ENST00000545889 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.57□□□□□ -1.36
CLIP1-218ENST00000545889 TRAV8-3A0A0A6YYJ7 113 aa6.57□□□□□ -1.36
CLIP1-218ENST00000545889 IGKV2-29A2NJV5 120 aaPredicted RBP6.57□□□□□ -1.36
CLIP1-218ENST00000545889 K7EQD1 137 aa6.57□□□□□ -1.36
CLIP1-218ENST00000545889 IGHG4P01861 327 aa6.57□□□□□ -1.36
CLIP1-218ENST00000545889 HIST1H4AP62805 103 aaKnown RBP6.57□□□□□ -1.36
CLIP1-218ENST00000545889 C11orf52Q96A22 123 aa6.57□□□□□ -1.36
CLIP1-218ENST00000545889 VSIG2Q96IQ7 327 aa6.57□□□□□ -1.36
CLIP1-218ENST00000545889 E7EUB6 86 aa6.56□□□□□ -1.36
CLIP1-218ENST00000545889 RBMY1FQ15415 496 aaKnown RBP6.56□□□□□ -1.36
CLIP1-218ENST00000545889 LINC01006Q8NI28 216 aa6.56□□□□□ -1.36
CLIP1-218ENST00000545889 CFAP47Q6ZTR5 3102 aa6.56□□□□□ -1.36
CLIP1-218ENST00000545889 LINC00482Q8N8I6 264 aa6.56□□□□□ -1.36
CLIP1-218ENST00000545889 LGALS9BQ3B8N2 356 aa6.56□□□□□ -1.36
CLIP1-218ENST00000545889 LGALS9CQ6DKI2 356 aa6.56□□□□□ -1.36
CLIP1-218ENST00000545889 TEN1Q86WV5 123 aa6.56□□□□□ -1.36
CLIP1-218ENST00000545889 Q8N8P6 123 aa6.56□□□□□ -1.36
CLIP1-218ENST00000545889 DEFB105AQ8NG35 78 aa6.56□□□□□ -1.36
CLIP1-218ENST00000545889 NDUFA1O15239 70 aa6.56□□□□□ -1.36
CLIP1-218ENST00000545889 CT83Q5H943 113 aa6.56□□□□□ -1.36
CLIP1-218ENST00000545889 MRPL36Q9P0J6 103 aaKnown RBP6.56□□□□□ -1.36
CLIP1-218ENST00000545889 SPANXA1Q9NS26 97 aa6.55□□□□□ -1.36
CLIP1-218ENST00000545889 IGLV2-18A0A075B6J9 118 aa6.55□□□□□ -1.36
CLIP1-218ENST00000545889 LOC107984640A0A0U1RRK4 108 aa6.55□□□□□ -1.36
CLIP1-218ENST00000545889 DAZ2Q13117 558 aaKnown RBP6.55□□□□□ -1.36
CLIP1-218ENST00000545889 OXLD1Q5BKU9 147 aa6.55□□□□□ -1.36
CLIP1-218ENST00000545889 FAM222AQ5U5X8 452 aa6.55□□□□□ -1.36
CLIP1-218ENST00000545889 DAZ4Q86SG3 579 aaKnown RBP6.55□□□□□ -1.36
CLIP1-218ENST00000545889 DAZ3Q9NR90 486 aaKnown RBP6.55□□□□□ -1.36
CLIP1-218ENST00000545889 TRAV4A0A0B4J268 109 aa6.55□□□□□ -1.36
CLIP1-218ENST00000545889 E9PLD3 99 aa6.55□□□□□ -1.36
CLIP1-218ENST00000545889 I3L2K1 104 aa6.55□□□□□ -1.36
CLIP1-218ENST00000545889 NDUFS5O43920 106 aa6.55□□□□□ -1.36
CLIP1-218ENST00000545889 NTN5Q8WTR8 489 aaPredicted RBP6.55□□□□□ -1.36
CLIP1-218ENST00000545889 M0R2N4 97 aa6.54□□□□□ -1.36
CLIP1-218ENST00000545889 GAGE2AQ6NT46 116 aa6.54□□□□□ -1.36
CLIP1-218ENST00000545889 LINC00574Q9H8X3 128 aa6.54□□□□□ -1.36
CLIP1-218ENST00000545889 ITPR3Q14573 2671 aa6.54□□□□□ -1.36
CLIP1-218ENST00000545889 FLNAP21333 2647 aaKnown RBP6.54□□□□□ -1.36
CLIP1-218ENST00000545889 WDFY3Q8IZQ1 3526 aa6.54□□□□□ -1.36
CLIP1-218ENST00000545889 MRPL51Q4U2R6 128 aaKnown RBP6.54□□□□□ -1.36
CLIP1-218ENST00000545889 C2orf82Q6UX34 121 aa6.54□□□□□ -1.36
CLIP1-218ENST00000545889 ANKRD29Q8N6D5 301 aa6.54□□□□□ -1.36
CLIP1-218ENST00000545889 SMIM9A6NGZ8 99 aa6.54□□□□□ -1.36
CLIP1-218ENST00000545889 J3KT08 172 aa6.54□□□□□ -1.36
CLIP1-218ENST00000545889 LINC00694P0DN24 101 aa6.54□□□□□ -1.36
CLIP1-218ENST00000545889 TMEM263Q8WUH6 116 aaKnown RBP6.54□□□□□ -1.36
CLIP1-218ENST00000545889 FXYD5Q96DB9 178 aa6.54□□□□□ -1.36
CLIP1-218ENST00000545889 CSDC2Q9Y534 153 aaKnown RBP6.54□□□□□ -1.36
CLIP1-218ENST00000545889 RBAKDNA6NC62 111 aa6.54□□□□□ -1.36
CLIP1-218ENST00000545889 IGF1P05019 195 aa6.54□□□□□ -1.36
CLIP1-218ENST00000545889 MAP6D1Q9H9H5 199 aa6.54□□□□□ -1.36
CLIP1-218ENST00000545889 TRAV10A0A0B4J240 114 aa6.53□□□□□ -1.36
CLIP1-218ENST00000545889 AVPP01185 164 aa6.53□□□□□ -1.36
CLIP1-218ENST00000545889 TRBV12-3P01733 135 aa6.53□□□□□ -1.36
CLIP1-218ENST00000545889 Q8N1Y9 231 aa6.53□□□□□ -1.36
CLIP1-218ENST00000545889 IGHV4-4A0A075B6R2 117 aa6.53□□□□□ -1.36
CLIP1-218ENST00000545889 UNQ9165/PRO28630Q6UXU0 137 aa6.53□□□□□ -1.36
CLIP1-218ENST00000545889 CDIP1Q9H305 208 aa6.53□□□□□ -1.36
CLIP1-218ENST00000545889 BRI3O95415 125 aa6.53□□□□□ -1.36
CLIP1-218ENST00000545889 SETXQ7Z333 2677 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 704.3 ms