RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 TSSC4Q9Y5U2 329 aaPredicted RBP12.83□□□□□ -0.35
SCARB1-208ENST00000544327 TEX15Q9BXT5 2789 aa12.83□□□□□ -0.36
SCARB1-208ENST00000544327 SAP30O75446 220 aa12.83□□□□□ -0.36
SCARB1-208ENST00000544327 RNASE1P07998 156 aaKnown RBP12.83□□□□□ -0.36
SCARB1-208ENST00000544327 F8W1H4 67 aa12.82□□□□□ -0.36
SCARB1-208ENST00000544327 C1orf158Q8N1D5 194 aa12.82□□□□□ -0.36
SCARB1-208ENST00000544327 G3V4G9 280 aa12.81□□□□□ -0.36
SCARB1-208ENST00000544327 CMC4P56277 68 aaPredicted RBP12.81□□□□□ -0.36
SCARB1-208ENST00000544327 A0A1W2PRX2 142 aa12.81□□□□□ -0.36
SCARB1-208ENST00000544327 CITED2Q99967 270 aaPredicted RBP12.81□□□□□ -0.36
SCARB1-208ENST00000544327 PGPEP1Q9NXJ5 209 aa12.81□□□□□ -0.36
SCARB1-208ENST00000544327 XCL2Q9UBD3 114 aa12.81□□□□□ -0.36
SCARB1-208ENST00000544327 Q9UF83 564 aa12.81□□□□□ -0.36
SCARB1-208ENST00000544327 UBE2D4Q9Y2X8 147 aa12.81□□□□□ -0.36
SCARB1-208ENST00000544327 ABCA12Q86UK0 2595 aa12.8□□□□□ -0.36
SCARB1-208ENST00000544327 APCP25054 2843 aa12.8□□□□□ -0.36
SCARB1-208ENST00000544327 AZU1P20160 251 aa12.79□□□□□ -0.36
SCARB1-208ENST00000544327 LINC01006Q8NI28 216 aa12.79□□□□□ -0.36
SCARB1-208ENST00000544327 VPS25Q9BRG1 176 aa12.79□□□□□ -0.36
SCARB1-208ENST00000544327 CENPEQ02224 2701 aa12.79□□□□□ -0.36
SCARB1-208ENST00000544327 NDUFA11Q86Y39 141 aa12.78□□□□□ -0.36
SCARB1-208ENST00000544327 C11orf44Q8N8P7 122 aa12.78□□□□□ -0.36
SCARB1-208ENST00000544327 AKAP9Q99996 3911 aa12.78□□□□□ -0.36
SCARB1-208ENST00000544327 TINCRA0A1B0GVN0 87 aa12.78□□□□□ -0.36
SCARB1-208ENST00000544327 FAM110AQ9BQ89 295 aa12.78□□□□□ -0.36
SCARB1-208ENST00000544327 YAE1D1Q9NRH1 226 aa12.78□□□□□ -0.36
SCARB1-208ENST00000544327 TSPAN13O95857 204 aa12.77□□□□□ -0.37
SCARB1-208ENST00000544327 HIST2H2BCQ6DN03 193 aa12.77□□□□□ -0.37
SCARB1-208ENST00000544327 TIMM21Q9BVV7 248 aa12.77□□□□□ -0.37
SCARB1-208ENST00000544327 PRO0461Q9UI25 63 aa12.76□□□□□ -0.37
SCARB1-208ENST00000544327 H3BMG7 143 aa12.76□□□□□ -0.37
SCARB1-208ENST00000544327 CFC1BP0CG36 223 aa12.76□□□□□ -0.37
SCARB1-208ENST00000544327 CFC1P0CG37 223 aa12.76□□□□□ -0.37
SCARB1-208ENST00000544327 UBE2D3P61077 147 aa12.76□□□□□ -0.37
SCARB1-208ENST00000544327 UBE2D2P62837 147 aa12.76□□□□□ -0.37
SCARB1-208ENST00000544327 CEMP1Q6PRD7 247 aaPredicted RBP12.76□□□□□ -0.37
SCARB1-208ENST00000544327 ITPR3Q14573 2671 aa12.75□□□□□ -0.37
SCARB1-208ENST00000544327 IGHV3-30-3P0DP02 117 aa12.75□□□□□ -0.37
SCARB1-208ENST00000544327 TMEM263Q8WUH6 116 aaKnown RBP12.75□□□□□ -0.37
SCARB1-208ENST00000544327 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.74□□□□□ -0.37
SCARB1-208ENST00000544327 IGHV1-58A0A0C4DH39 117 aa12.74□□□□□ -0.37
SCARB1-208ENST00000544327 TRBV10-1A0A0K0K1A3 114 aa12.74□□□□□ -0.37
SCARB1-208ENST00000544327 IGKV2-29A2NJV5 120 aaPredicted RBP12.74□□□□□ -0.37
SCARB1-208ENST00000544327 GAGE13Q4V321 117 aa12.74□□□□□ -0.37
SCARB1-208ENST00000544327 C10orf126Q8N4M7 172 aa12.74□□□□□ -0.37
SCARB1-208ENST00000544327 TMEM238C9JI98 176 aa12.74□□□□□ -0.37
SCARB1-208ENST00000544327 APOMO95445 188 aa12.74□□□□□ -0.37
SCARB1-208ENST00000544327 PLA2G2AP14555 144 aa12.74□□□□□ -0.37
SCARB1-208ENST00000544327 LYRM7Q5U5X0 104 aa12.74□□□□□ -0.37
SCARB1-208ENST00000544327 ZNF469Q96JG9 3925 aaPredicted RBP12.73□□□□□ -0.37
SCARB1-208ENST00000544327 TRGV1A0A0A0MS02 117 aa12.73□□□□□ -0.37
SCARB1-208ENST00000544327 A0A0J9YXY3 114 aa12.73□□□□□ -0.37
SCARB1-208ENST00000544327 WFDC2Q14508 124 aa12.73□□□□□ -0.37
SCARB1-208ENST00000544327 Q6ZUT4 128 aa12.73□□□□□ -0.37
SCARB1-208ENST00000544327 EPG5Q9HCE0 2579 aa12.73□□□□□ -0.37
SCARB1-208ENST00000544327 IGHV3-64A0A075B6Q5 118 aa12.72□□□□□ -0.37
SCARB1-208ENST00000544327 TRAV4A0A0B4J268 109 aa12.72□□□□□ -0.37
SCARB1-208ENST00000544327 IGHV3-38A0A0C4DH36 116 aa12.72□□□□□ -0.37
SCARB1-208ENST00000544327 NDUFA7O95182 113 aa12.72□□□□□ -0.37
SCARB1-208ENST00000544327 IGLV1-51P01701 117 aa12.72□□□□□ -0.37
SCARB1-208ENST00000544327 GIG44P09565 113 aaPredicted RBP12.72□□□□□ -0.37
SCARB1-208ENST00000544327 IGHV3OR16-12A0A075B7B8 117 aa12.72□□□□□ -0.37
SCARB1-208ENST00000544327 TEX48A0A1B0GUV7 120 aa12.72□□□□□ -0.37
SCARB1-208ENST00000544327 TIRAPP58753 221 aa12.72□□□□□ -0.37
SCARB1-208ENST00000544327 RPL24P83731 157 aaKnown RBP12.72□□□□□ -0.37
SCARB1-208ENST00000544327 DAZ2Q13117 558 aaKnown RBP12.72□□□□□ -0.37
SCARB1-208ENST00000544327 VSIG2Q96IQ7 327 aa12.72□□□□□ -0.37
SCARB1-208ENST00000544327 IGLV5-45A0A087WSX0 123 aa12.71□□□□□ -0.38
SCARB1-208ENST00000544327 A0A0B4J2C4 111 aa12.71□□□□□ -0.38
SCARB1-208ENST00000544327 J3QKU1 62 aa12.71□□□□□ -0.38
SCARB1-208ENST00000544327 HILS1P60008 231 aa12.71□□□□□ -0.38
SCARB1-208ENST00000544327 C19orf73Q9NVV2 129 aa12.71□□□□□ -0.38
SCARB1-208ENST00000544327 PRO1854Q9UHT4 67 aa12.71□□□□□ -0.38
SCARB1-208ENST00000544327 ADARB2-AS1A8MUL3 147 aa12.7□□□□□ -0.38
SCARB1-208ENST00000544327 K7EQD1 137 aa12.7□□□□□ -0.38
SCARB1-208ENST00000544327 RNASE13Q5GAN3 156 aaKnown RBP12.7□□□□□ -0.38
SCARB1-208ENST00000544327 FAM19A3Q7Z5A8 133 aa12.69□□□□□ -0.38
SCARB1-208ENST00000544327 ZNF418Q8TF45 676 aaPredicted RBP12.69□□□□□ -0.38
SCARB1-208ENST00000544327 LITAFQ99732 161 aa12.69□□□□□ -0.38
SCARB1-208ENST00000544327 TRAV8-3A0A0A6YYJ7 113 aa12.69□□□□□ -0.38
SCARB1-208ENST00000544327 A4D1N5 150 aa12.69□□□□□ -0.38
SCARB1-208ENST00000544327 RPL36AP83881 106 aaKnown RBP12.69□□□□□ -0.38
SCARB1-208ENST00000544327 Q6ZTI0 123 aa12.69□□□□□ -0.38
SCARB1-208ENST00000544327 DAZ4Q86SG3 579 aaKnown RBP12.69□□□□□ -0.38
SCARB1-208ENST00000544327 RPL36ALQ969Q0 106 aaKnown RBP12.69□□□□□ -0.38
SCARB1-208ENST00000544327 C16orf74Q96GX8 76 aa12.69□□□□□ -0.38
SCARB1-208ENST00000544327 DAZ3Q9NR90 486 aaKnown RBP12.69□□□□□ -0.38
SCARB1-208ENST00000544327 CSDC2Q9Y534 153 aaKnown RBP12.69□□□□□ -0.38
SCARB1-208ENST00000544327 MYO9AB2RTY4 2548 aa12.69□□□□□ -0.38
SCARB1-208ENST00000544327 ANK3Q12955 4377 aaKnown RBP12.68□□□□□ -0.38
SCARB1-208ENST00000544327 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.68□□□□□ -0.38
SCARB1-208ENST00000544327 MUSTN1Q8IVN3 82 aa12.68□□□□□ -0.38
SCARB1-208ENST00000544327 SPANXDQ9BXN6 97 aa12.68□□□□□ -0.38
SCARB1-208ENST00000544327 SPANXCQ9NY87 97 aa12.68□□□□□ -0.38
SCARB1-208ENST00000544327 TRBV20-1A0A075B6N2 111 aa12.67□□□□□ -0.38
SCARB1-208ENST00000544327 PLAC8L1A1L4L8 177 aa12.67□□□□□ -0.38
SCARB1-208ENST00000544327 CIDEAO60543 219 aa12.67□□□□□ -0.38
SCARB1-208ENST00000544327 ZFAND6Q6FIF0 208 aa12.67□□□□□ -0.38
SCARB1-208ENST00000544327 GEMIN7Q9H840 131 aaKnown RBP12.67□□□□□ -0.38
SCARB1-208ENST00000544327 NDUFA12Q9UI09 145 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms