RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 ADIRFQ15847 76 aa5.61□□□□□ -1.51
DDB1-212ENST00000538470 NTM-AS1Q6ZSK4 140 aa5.61□□□□□ -1.51
DDB1-212ENST00000538470 LINC01551Q86U37 167 aa5.61□□□□□ -1.51
DDB1-212ENST00000538470 F2Z2F3 143 aa5.6□□□□□ -1.51
DDB1-212ENST00000538470 GATCO43716 136 aaKnown RBP5.6□□□□□ -1.51
DDB1-212ENST00000538470 NDUFS6O75380 124 aaKnown RBP5.6□□□□□ -1.51
DDB1-212ENST00000538470 OXTP01178 125 aa5.6□□□□□ -1.51
DDB1-212ENST00000538470 MGPP08493 103 aa5.6□□□□□ -1.51
DDB1-212ENST00000538470 TRGC1P0CF51 173 aa5.6□□□□□ -1.51
DDB1-212ENST00000538470 GAGE6Q13070 117 aa5.6□□□□□ -1.51
DDB1-212ENST00000538470 KRTAP26-1Q6PEX3 210 aa5.6□□□□□ -1.51
DDB1-212ENST00000538470 LYZL1Q6UWQ5 148 aa5.6□□□□□ -1.51
DDB1-212ENST00000538470 C9orf163Q8N9P6 203 aa5.6□□□□□ -1.51
DDB1-212ENST00000538470 PKHD1L1Q86WI1 4243 aa5.6□□□□□ -1.51
DDB1-212ENST00000538470 TRAV8-4A0A0B4J246 113 aa5.59□□□□□ -1.51
DDB1-212ENST00000538470 M0QY20 66 aa5.59□□□□□ -1.51
DDB1-212ENST00000538470 PRSS1P07477 247 aa5.59□□□□□ -1.51
DDB1-212ENST00000538470 IFITM2Q01629 132 aa5.59□□□□□ -1.51
DDB1-212ENST00000538470 REG3AQ06141 175 aa5.59□□□□□ -1.51
DDB1-212ENST00000538470 TMEM241Q24JQ0 296 aa5.59□□□□□ -1.51
DDB1-212ENST00000538470 FAM74A3Q4VXF1 159 aa5.59□□□□□ -1.51
DDB1-212ENST00000538470 CLLU1Q5K131 121 aa5.59□□□□□ -1.51
DDB1-212ENST00000538470 SUMO4Q6EEV6 95 aa5.59□□□□□ -1.51
DDB1-212ENST00000538470 RASL11AQ6T310 242 aa5.59□□□□□ -1.51
DDB1-212ENST00000538470 CLPSL2Q6UWE3 100 aa5.59□□□□□ -1.51
DDB1-212ENST00000538470 LINC00269Q8N2A0 174 aa5.59□□□□□ -1.51
DDB1-212ENST00000538470 CLRN3Q8NCR9 226 aa5.59□□□□□ -1.51
DDB1-212ENST00000538470 PGLYRP4Q96LB8 373 aa5.59□□□□□ -1.51
DDB1-212ENST00000538470 A0A1B0GUV1 79 aa5.58□□□□□ -1.52
DDB1-212ENST00000538470 CTRLP40313 264 aa5.58□□□□□ -1.52
DDB1-212ENST00000538470 RPL37AP61513 92 aaKnown RBP5.58□□□□□ -1.52
DDB1-212ENST00000538470 CNBPP62633 177 aaKnown RBP5.58□□□□□ -1.52
DDB1-212ENST00000538470 RPL23P62829 140 aaKnown RBP5.58□□□□□ -1.52
DDB1-212ENST00000538470 TWIST1Q15672 202 aa5.58□□□□□ -1.52
DDB1-212ENST00000538470 SERTAD4-AS1Q5TG53 156 aa5.58□□□□□ -1.52
DDB1-212ENST00000538470 FAM231DQ6ZW35 169 aa5.58□□□□□ -1.52
DDB1-212ENST00000538470 GTSF1Q8WW33 167 aa5.58□□□□□ -1.52
DDB1-212ENST00000538470 TMEM243Q9BU79 118 aa5.58□□□□□ -1.52
DDB1-212ENST00000538470 DPH3P1Q9H4G8 78 aa5.58□□□□□ -1.52
DDB1-212ENST00000538470 SMDT1Q9H4I9 107 aa5.58□□□□□ -1.52
DDB1-212ENST00000538470 NAT8Q9UHE5 227 aa5.58□□□□□ -1.52
DDB1-212ENST00000538470 HMCN2Q8NDA2 5059 aa5.58□□□□□ -1.52
DDB1-212ENST00000538470 A8MWL6 223 aa5.57□□□□□ -1.52
DDB1-212ENST00000538470 NTF3P20783 257 aa5.57□□□□□ -1.52
DDB1-212ENST00000538470 CIRBPQ14011 172 aaKnown RBP5.57□□□□□ -1.52
DDB1-212ENST00000538470 COTL1Q14019 142 aa5.57□□□□□ -1.52
DDB1-212ENST00000538470 CT83Q5H943 113 aa5.57□□□□□ -1.52
DDB1-212ENST00000538470 WDR73Q6P4I2 378 aa5.57□□□□□ -1.52
DDB1-212ENST00000538470 C20orf203Q8NBC4 194 aa5.57□□□□□ -1.52
DDB1-212ENST00000538470 ISOC2Q96AB3 205 aa5.57□□□□□ -1.52
DDB1-212ENST00000538470 CNFNQ9BYD5 112 aa5.57□□□□□ -1.52
DDB1-212ENST00000538470 NIT2Q9NQR4 276 aa5.57□□□□□ -1.52
DDB1-212ENST00000538470 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.56□□□□□ -1.52
DDB1-212ENST00000538470 HIGD1CA8MV81 97 aa5.56□□□□□ -1.52
DDB1-212ENST00000538470 UBE2L6O14933 153 aa5.56□□□□□ -1.52
DDB1-212ENST00000538470 AMTP48728 403 aa5.56□□□□□ -1.52
DDB1-212ENST00000538470 TSKUQ8WUA8 353 aa5.56□□□□□ -1.52
DDB1-212ENST00000538470 BORCS7Q96B45 105 aa5.56□□□□□ -1.52
DDB1-212ENST00000538470 OSTCQ9NRP0 149 aa5.56□□□□□ -1.52
DDB1-212ENST00000538470 V9GYV3 84 aa5.56□□□□□ -1.52
DDB1-212ENST00000538470 IGLV4-60A0A075B6I1 120 aa5.55□□□□□ -1.52
DDB1-212ENST00000538470 IGLV10-54A0A075B6I4 117 aa5.55□□□□□ -1.52
DDB1-212ENST00000538470 IGHV3-64A0A075B6Q5 118 aa5.55□□□□□ -1.52
DDB1-212ENST00000538470 hDV102S1A0JD36 115 aa5.55□□□□□ -1.52
DDB1-212ENST00000538470 SDIM1Q6ZPB5 146 aa5.55□□□□□ -1.52
DDB1-212ENST00000538470 SMIM15Q7Z3B0 74 aa5.55□□□□□ -1.52
DDB1-212ENST00000538470 RNF185Q96GF1 192 aa5.55□□□□□ -1.52
DDB1-212ENST00000538470 AP5S1Q9NUS5 200 aa5.55□□□□□ -1.52
DDB1-212ENST00000538470 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.55□□□□□ -1.52
DDB1-212ENST00000538470 TRAV26-2A0A0B4J265 109 aa5.54□□□□□ -1.52
DDB1-212ENST00000538470 NCR2O95944 276 aa5.54□□□□□ -1.52
DDB1-212ENST00000538470 FOXA3P55318 350 aaPredicted RBP5.54□□□□□ -1.52
DDB1-212ENST00000538470 COMMD7Q86VX2 200 aa5.54□□□□□ -1.52
DDB1-212ENST00000538470 GFRA4Q9GZZ7 299 aa5.54□□□□□ -1.52
DDB1-212ENST00000538470 A0A1B0GUT8 65 aa5.53□□□□□ -1.52
DDB1-212ENST00000538470 H7C423 109 aa5.53□□□□□ -1.52
DDB1-212ENST00000538470 PANO1I0J062 215 aa5.53□□□□□ -1.52
DDB1-212ENST00000538470 CFAP161Q6P656 301 aa5.53□□□□□ -1.52
DDB1-212ENST00000538470 NUP35Q8NFH5 326 aa5.53□□□□□ -1.52
DDB1-212ENST00000538470 FAM231BA6NCW3 169 aa5.52□□□□□ -1.53
DDB1-212ENST00000538470 F8W036 122 aa5.52□□□□□ -1.53
DDB1-212ENST00000538470 APCSP02743 223 aa5.52□□□□□ -1.53
DDB1-212ENST00000538470 HNRNPA3P51991 378 aaKnown RBP5.52□□□□□ -1.53
DDB1-212ENST00000538470 AMMECR1LQ6DCA0 310 aa5.52□□□□□ -1.53
DDB1-212ENST00000538470 Q6ZRU5 148 aa5.52□□□□□ -1.53
DDB1-212ENST00000538470 GATD1Q8NB37 220 aa5.52□□□□□ -1.53
DDB1-212ENST00000538470 SPACA4Q8TDM5 124 aa5.52□□□□□ -1.53
DDB1-212ENST00000538470 NAT8BQ9UHF3 227 aa5.52□□□□□ -1.53
DDB1-212ENST00000538470 SMIM27A0A1W2PRY6 76 aa5.51□□□□□ -1.53
DDB1-212ENST00000538470 TMEM218A2RU14 115 aa5.51□□□□□ -1.53
DDB1-212ENST00000538470 ZNF25P17030 456 aaPredicted RBP5.51□□□□□ -1.53
DDB1-212ENST00000538470 ADCYAP1P18509 176 aa5.51□□□□□ -1.53
DDB1-212ENST00000538470 CAMPP49913 170 aa5.51□□□□□ -1.53
DDB1-212ENST00000538470 PNRC1Q12796 327 aaPredicted RBP5.51□□□□□ -1.53
DDB1-212ENST00000538470 RIGQ13278 110 aa5.51□□□□□ -1.53
DDB1-212ENST00000538470 MRPL54Q6P161 138 aaKnown RBP5.51□□□□□ -1.53
DDB1-212ENST00000538470 UQCC3Q6UW78 93 aa5.51□□□□□ -1.53
DDB1-212ENST00000538470 C15orf56Q8N910 161 aa5.51□□□□□ -1.53
DDB1-212ENST00000538470 RPL39LQ96EH5 51 aaKnown RBP5.51□□□□□ -1.53
DDB1-212ENST00000538470 PLAC8Q9NZF1 115 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms