RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 TRAV12-3A0A0B4J271 114 aa-1.46□□□□□ -2.64
COPB1-212ENST00000534771 GABARAPH6UMI1 98 aa-1.46□□□□□ -2.64
COPB1-212ENST00000534771 CRYGSP22914 178 aa-1.46□□□□□ -2.64
COPB1-212ENST00000534771 PCBD1P61457 104 aa-1.46□□□□□ -2.64
COPB1-212ENST00000534771 LSM6P62312 80 aaKnown RBP-1.46□□□□□ -2.64
COPB1-212ENST00000534771 AKR1C8PQ5T2L2 129 aa-1.46□□□□□ -2.64
COPB1-212ENST00000534771 LINC00305Q7Z4B0 112 aa-1.46□□□□□ -2.64
COPB1-212ENST00000534771 BAGE3Q86Y29 109 aa-1.46□□□□□ -2.64
COPB1-212ENST00000534771 CNPY4Q8N129 248 aa-1.46□□□□□ -2.64
COPB1-212ENST00000534771 MAFIPQ8WZ33 124 aa-1.46□□□□□ -2.64
COPB1-212ENST00000534771 CARD19Q96LW7 228 aa-1.46□□□□□ -2.64
COPB1-212ENST00000534771 SH3BGRL3Q9H299 93 aa-1.46□□□□□ -2.64
COPB1-212ENST00000534771 IBTKQ9P2D0 1353 aaPredicted RBP-1.47□□□□□ -2.64
COPB1-212ENST00000534771 CAMSAP1Q5T5Y3 1602 aa-1.47□□□□□ -2.64
COPB1-212ENST00000534771 ZFYVE9O95405 1425 aa-1.47□□□□□ -2.64
COPB1-212ENST00000534771 NUP210Q8TEM1 1887 aaPredicted RBP-1.47□□□□□ -2.64
COPB1-212ENST00000534771 GAPVD1Q14C86 1478 aa-1.47□□□□□ -2.64
COPB1-212ENST00000534771 TRAV13-1A0A0B4J241 112 aa-1.47□□□□□ -2.64
COPB1-212ENST00000534771 FAM92AA1XBS5 289 aa-1.47□□□□□ -2.64
COPB1-212ENST00000534771 PPP5D1E7EU14 171 aa-1.47□□□□□ -2.64
COPB1-212ENST00000534771 HBDP02042 147 aa-1.47□□□□□ -2.64
COPB1-212ENST00000534771 TPM3P06753 285 aa-1.47□□□□□ -2.64
COPB1-212ENST00000534771 CST2P09228 141 aa-1.47□□□□□ -2.64
COPB1-212ENST00000534771 CEBPGP53567 150 aa-1.47□□□□□ -2.64
COPB1-212ENST00000534771 PLGLB1Q02325 96 aa-1.47□□□□□ -2.64
COPB1-212ENST00000534771 DEFB123Q8N688 67 aa-1.47□□□□□ -2.64
COPB1-212ENST00000534771 DYNLRB2Q8TF09 96 aa-1.47□□□□□ -2.64
COPB1-212ENST00000534771 ARMC1Q9NVT9 282 aa-1.47□□□□□ -2.64
COPB1-212ENST00000534771 KDM5CP41229 1560 aa-1.47□□□□□ -2.65
COPB1-212ENST00000534771 COL4A6Q14031 1691 aa-1.48□□□□□ -2.65
COPB1-212ENST00000534771 ATG12O94817 140 aa-1.48□□□□□ -2.65
COPB1-212ENST00000534771 NCR2O95944 276 aa-1.48□□□□□ -2.65
COPB1-212ENST00000534771 TMED2Q15363 201 aa-1.48□□□□□ -2.65
COPB1-212ENST00000534771 LTC4SQ16873 150 aa-1.48□□□□□ -2.65
COPB1-212ENST00000534771 AGPAT4-IT1Q9H0P7 198 aa-1.48□□□□□ -2.65
COPB1-212ENST00000534771 SLC35B3Q9H1N7 401 aa-1.48□□□□□ -2.65
COPB1-212ENST00000534771 METTL1Q9UBP6 276 aaKnown RBP-1.48□□□□□ -2.65
COPB1-212ENST00000534771 LRRC37A3O60309 1634 aa-1.48□□□□□ -2.65
COPB1-212ENST00000534771 FRYLO94915 3013 aa-1.48□□□□□ -2.65
COPB1-212ENST00000534771 NSD3Q9BZ95 1437 aa-1.49□□□□□ -2.65
COPB1-212ENST00000534771 XIRP1Q702N8 1843 aaKnown RBP-1.49□□□□□ -2.65
COPB1-212ENST00000534771 TRBV7-6A0A0J9YX20 115 aa-1.49□□□□□ -2.65
COPB1-212ENST00000534771 H3BMG7 143 aa-1.49□□□□□ -2.65
COPB1-212ENST00000534771 CCDC179H3BU77 68 aa-1.49□□□□□ -2.65
COPB1-212ENST00000534771 K7EP34 96 aa-1.49□□□□□ -2.65
COPB1-212ENST00000534771 TPM4P67936 248 aa-1.49□□□□□ -2.65
COPB1-212ENST00000534771 BASP1P80723 227 aaKnown RBP-1.49□□□□□ -2.65
COPB1-212ENST00000534771 TMEM91Q6ZNR0 172 aa-1.49□□□□□ -2.65
COPB1-212ENST00000534771 KRTAP8-1Q8IUC2 63 aa-1.49□□□□□ -2.65
COPB1-212ENST00000534771 UFC1Q9Y3C8 167 aa-1.49□□□□□ -2.65
COPB1-212ENST00000534771 ADGRB1O14514 1584 aa-1.5□□□□□ -2.65
COPB1-212ENST00000534771 CRYBA4P53673 196 aa-1.5□□□□□ -2.65
COPB1-212ENST00000534771 HSD17B12Q53GQ0 312 aa-1.5□□□□□ -2.65
COPB1-212ENST00000534771 SNX29P2Q8IUI4 249 aa-1.5□□□□□ -2.65
COPB1-212ENST00000534771 LLPHQ9BRT6 129 aaKnown RBP-1.5□□□□□ -2.65
COPB1-212ENST00000534771 SS18L2Q9UHA2 77 aa-1.5□□□□□ -2.65
COPB1-212ENST00000534771 LOC400499M0QZD8 3231 aa-1.5□□□□□ -2.65
COPB1-212ENST00000534771 MKI67P46013 3256 aaKnown RBP-1.5□□□□□ -2.65
COPB1-212ENST00000534771 TROQ12816 1431 aaPredicted RBP-1.5□□□□□ -2.65
COPB1-212ENST00000534771 UHRF1BP1LA0JNW5 1464 aa-1.5□□□□□ -2.65
COPB1-212ENST00000534771 CLPSL1A2RUU4 121 aa-1.51□□□□□ -2.65
COPB1-212ENST00000534771 UQCRQO14949 82 aa-1.51□□□□□ -2.65
COPB1-212ENST00000534771 MT1FP04733 61 aa-1.51□□□□□ -2.65
COPB1-212ENST00000534771 HIST1H1BP16401 226 aaKnown RBP-1.51□□□□□ -2.65
COPB1-212ENST00000534771 S100A11P31949 105 aa-1.51□□□□□ -2.65
COPB1-212ENST00000534771 CCL7P80098 99 aa-1.51□□□□□ -2.65
COPB1-212ENST00000534771 STX19Q8N4C7 294 aa-1.51□□□□□ -2.65
COPB1-212ENST00000534771 SMIM4Q8WVI0 70 aa-1.51□□□□□ -2.65
COPB1-212ENST00000534771 ARL2BPQ9Y2Y0 163 aa-1.51□□□□□ -2.65
COPB1-212ENST00000534771 MED23Q9ULK4 1368 aa-1.51□□□□□ -2.65
COPB1-212ENST00000534771 SMG6Q86US8 1419 aaKnown RBP-1.51□□□□□ -2.65
COPB1-212ENST00000534771 MRC1P22897 1456 aa-1.51□□□□□ -2.65
COPB1-212ENST00000534771 CDC42BPGQ6DT37 1551 aa-1.51□□□□□ -2.65
COPB1-212ENST00000534771 KIAA0556O60303 1618 aa-1.51□□□□□ -2.65
COPB1-212ENST00000534771 MUC22E2RYF6 1773 aaPredicted RBP-1.52□□□□□ -2.65
COPB1-212ENST00000534771 FER1L6Q2WGJ9 1857 aa-1.52□□□□□ -2.65
COPB1-212ENST00000534771 H3BNG1 76 aa-1.52□□□□□ -2.65
COPB1-212ENST00000534771 M0QZK8 103 aa-1.52□□□□□ -2.65
COPB1-212ENST00000534771 UBE2D1P51668 147 aa-1.52□□□□□ -2.65
COPB1-212ENST00000534771 PRAP1Q96NZ9 151 aa-1.52□□□□□ -2.65
COPB1-212ENST00000534771 PHB2Q99623 299 aa-1.52□□□□□ -2.65
COPB1-212ENST00000534771 GINS3Q9BRX5 216 aa-1.52□□□□□ -2.65
COPB1-212ENST00000534771 CBLN4Q9NTU7 201 aa-1.52□□□□□ -2.65
COPB1-212ENST00000534771 LAMTOR2Q9Y2Q5 125 aa-1.52□□□□□ -2.65
COPB1-212ENST00000534771 NOP16Q9Y3C1 178 aaKnown RBP-1.52□□□□□ -2.65
COPB1-212ENST00000534771 A2MP01023 1474 aa-1.52□□□□□ -2.65
COPB1-212ENST00000534771 ADAMTS12P58397 1594 aa-1.52□□□□□ -2.65
COPB1-212ENST00000534771 ZCCHC11Q5TAX3 1644 aaKnown RBP-1.52□□□□□ -2.65
COPB1-212ENST00000534771 KNDC1Q76NI1 1749 aa-1.52□□□□□ -2.65
COPB1-212ENST00000534771 MUC3AQ02505 3323 aa-1.53□□□□□ -2.65
COPB1-212ENST00000534771 SYS1-DBNDD2H3BUS1 97 aa-1.53□□□□□ -2.65
COPB1-212ENST00000534771 IFNGP01579 166 aa-1.53□□□□□ -2.65
COPB1-212ENST00000534771 CCL18P55774 89 aa-1.53□□□□□ -2.65
COPB1-212ENST00000534771 COTL1Q14019 142 aa-1.53□□□□□ -2.65
COPB1-212ENST00000534771 DOCK1Q14185 1865 aa-1.53□□□□□ -2.65
COPB1-212ENST00000534771 Q6JHZ5 121 aa-1.53□□□□□ -2.65
COPB1-212ENST00000534771 C9orf62Q8N4C0 152 aa-1.53□□□□□ -2.65
COPB1-212ENST00000534771 OR13C6PQ8NH95 151 aa-1.53□□□□□ -2.65
COPB1-212ENST00000534771 PRDM2Q13029 1718 aa-1.54□□□□□ -2.66
COPB1-212ENST00000534771 PTPN23Q9H3S7 1636 aa-1.54□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms