RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 RAB37Q96AX2 223 aa4.28□□□□□ -1.72
CLNS1A-212ENST00000533957 PRADC1Q9BSG0 188 aa4.28□□□□□ -1.72
CLNS1A-212ENST00000533957 TIMM21Q9BVV7 248 aa4.28□□□□□ -1.72
CLNS1A-212ENST00000533957 YAE1D1Q9NRH1 226 aa4.28□□□□□ -1.72
CLNS1A-212ENST00000533957 BEX4Q9NWD9 120 aaPredicted RBP4.28□□□□□ -1.72
CLNS1A-212ENST00000533957 VPREB3Q9UKI3 123 aa4.28□□□□□ -1.72
CLNS1A-212ENST00000533957 VPS13CQ709C8 3753 aa4.28□□□□□ -1.72
CLNS1A-212ENST00000533957 AKAP6Q13023 2319 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 ABCA1O95477 2261 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 J3QQQ9 107 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 GNRH2O43555 120 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 TIMM17BO60830 172 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 MGPP08493 103 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 P0DMU3 169 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 FAM231AP0DMU4 169 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 FAM231CP0DMU5 169 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 GATA1P15976 413 aaPredicted RBP4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 UBE2D3P61077 147 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 UBE2D2P62837 147 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 CIRBPQ14011 172 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 C18orf65Q6ZTR6 163 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 TMEM219Q86XT9 240 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 C10orf126Q8N4M7 172 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 MRPL16Q9NX20 251 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 PRO1854Q9UHT4 67 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 TP53TG1Q9Y2A0 90 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 CSDC2Q9Y534 153 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 MED13LQ71F56 2210 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 CENPEQ02224 2701 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 NAV2Q8IVL1 2488 aa4.27□□□□□ -1.73
CLNS1A-212ENST00000533957 MYO9AB2RTY4 2548 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 IGHV3OR16-13A0A075B7E8 117 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 IGHV3-74A0A0B4J1X5 117 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 TRAV26-2A0A0B4J265 109 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 A0A0J9YY99 117 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 TRBV10-1A0A0K0K1A3 114 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 TINCRA0A1B0GVN0 87 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 H7C423 109 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 M0R2P5 195 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 CRYGDP07320 174 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 SCGB1C2P0DMR2 95 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 FXYD7P58549 80 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 BLCAPP62952 87 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 MRPS36P82909 103 aaKnown RBP4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 ZNF415Q09FC8 603 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 PRR9Q5T870 116 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 SFTA2Q6UW10 78 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 Q6ZTC4 211 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 Q71RC1 249 aaPredicted RBP4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 NDUFA11Q86Y39 141 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 SBSPONQ8IVN8 264 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 MAPKAPK5-AS1Q8N8E1 139 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 AMELXQ99217 191 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 FAM110AQ9BQ89 295 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 POLQO75417 2590 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 ROS1P08922 2347 aa4.26□□□□□ -1.73
CLNS1A-212ENST00000533957 MAST4O15021 2626 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 ABCA2Q9BZC7 2435 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 IGHV3OR16-8A0A075B7F1 116 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 IGHV3-49A0A0A0MS15 119 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 TRAV12-3A0A0B4J271 114 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 TRBV30A0A0K0K1B3 111 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 A0A1B0GV72 72 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 TMEM223A0PJW6 202 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 GAS8-AS1O95177 125 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 IGHV3-30P01768 117 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 IGHV3-30-5P0DP03 117 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 IGHV4-38-2P0DP08 117 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 DEFB113Q30KQ7 82 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 TMEM170BQ5T4T1 132 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 BRD3OSQ6XYD6 125 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 FAM19A3Q7Z5A8 133 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 TEN1Q86WV5 123 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 PPDPFLQ8WWR9 84 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 ERG28Q9UKR5 140 aa4.25□□□□□ -1.73
CLNS1A-212ENST00000533957 IGLV4-69A0A075B6H9 119 aa4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 IGHV4-30-2A0A087WSY4 118 aa4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 TRAV26-1A0A087WT03 109 aa4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 APOMO95445 188 aa4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 IGHV3-11P01762 117 aa4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 ATXN8Q156A1 80 aa4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 ZNF56Q15929 161 aa4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 MRPL23Q16540 153 aaKnown RBP4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 LY6EQ16553 131 aa4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 CFAP126Q5VTH2 177 aa4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 C4orf3Q8WVX3 66 aa4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 RPL39LQ96EH5 51 aaKnown RBP4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 C1QTNF4Q9BXJ3 329 aa4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 SPANXCQ9NY87 97 aa4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 SPG11Q96JI7 2443 aa4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 LRBAP50851 2863 aa4.24□□□□□ -1.73
CLNS1A-212ENST00000533957 TRAV4A0A0B4J268 109 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 IGHV1-58A0A0C4DH39 117 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 TEX48A0A1B0GUV7 120 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 H3BMM0 161 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 TSHBP01222 138 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 TRBV12-3P01733 135 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 IGHV3-53P01767 116 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 CFC1BP0CG36 223 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 CFC1P0CG37 223 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms