RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 S100A8P05109 93 aa12.66□□□□□ -0.38
UBXN1-212ENST00000531625 Q6ZSA8 131 aa12.66□□□□□ -0.38
UBXN1-212ENST00000531625 Q9HAA7 133 aa12.66□□□□□ -0.38
UBXN1-212ENST00000531625 TMEM242Q9NWH2 141 aa12.66□□□□□ -0.38
UBXN1-212ENST00000531625 LRP1Q07954 4544 aaKnown RBP12.65□□□□□ -0.38
UBXN1-212ENST00000531625 A0A1B0GXF2 115 aa12.65□□□□□ -0.38
UBXN1-212ENST00000531625 S100PP25815 95 aa12.65□□□□□ -0.38
UBXN1-212ENST00000531625 AMN1Q8IY45 258 aa12.65□□□□□ -0.38
UBXN1-212ENST00000531625 NEXN-AS1Q8NBZ9 246 aa12.65□□□□□ -0.38
UBXN1-212ENST00000531625 ATP6V0E2Q8NHE4 81 aa12.65□□□□□ -0.38
UBXN1-212ENST00000531625 BTF3L4Q96K17 158 aa12.65□□□□□ -0.38
UBXN1-212ENST00000531625 HMCN2Q8NDA2 5059 aa12.65□□□□□ -0.38
UBXN1-212ENST00000531625 TRBV7-3A0A075B6L6 115 aa12.64□□□□□ -0.39
UBXN1-212ENST00000531625 LINC00694P0DN24 101 aa12.64□□□□□ -0.39
UBXN1-212ENST00000531625 LAGE3Q14657 143 aa12.64□□□□□ -0.39
UBXN1-212ENST00000531625 OR10J3Q5JRS4 329 aa12.64□□□□□ -0.39
UBXN1-212ENST00000531625 RASL11AQ6T310 242 aa12.64□□□□□ -0.39
UBXN1-212ENST00000531625 GATD1Q8NB37 220 aa12.64□□□□□ -0.39
UBXN1-212ENST00000531625 DEFB104AQ8WTQ1 72 aa12.64□□□□□ -0.39
UBXN1-212ENST00000531625 URGCP-MRPS24S4R325 110 aa12.64□□□□□ -0.39
UBXN1-212ENST00000531625 LINC00528Q8N1L1 170 aa12.63□□□□□ -0.39
UBXN1-212ENST00000531625 RNF185Q96GF1 192 aa12.63□□□□□ -0.39
UBXN1-212ENST00000531625 TM2D2Q9BX73 214 aa12.63□□□□□ -0.39
UBXN1-212ENST00000531625 RAB4AP20338 218 aa12.62□□□□□ -0.39
UBXN1-212ENST00000531625 UBE2D3P61077 147 aa12.62□□□□□ -0.39
UBXN1-212ENST00000531625 UBE2D2P62837 147 aa12.62□□□□□ -0.39
UBXN1-212ENST00000531625 LELP1Q5T871 98 aa12.62□□□□□ -0.39
UBXN1-212ENST00000531625 TRAV9-1A0A075B6T8 112 aa12.61□□□□□ -0.39
UBXN1-212ENST00000531625 FAM104BQ5XKR9 115 aa12.61□□□□□ -0.39
UBXN1-212ENST00000531625 MRAP2Q96G30 205 aa12.61□□□□□ -0.39
UBXN1-212ENST00000531625 DNAJC30Q96LL9 226 aa12.61□□□□□ -0.39
UBXN1-212ENST00000531625 GTSF1LQ9H1H1 148 aa12.61□□□□□ -0.39
UBXN1-212ENST00000531625 NIT2Q9NQR4 276 aa12.61□□□□□ -0.39
UBXN1-212ENST00000531625 IGHV3-30P01768 117 aa12.6□□□□□ -0.39
UBXN1-212ENST00000531625 IGHV3-33P01772 117 aa12.6□□□□□ -0.39
UBXN1-212ENST00000531625 IGHV3-30-3P0DP02 117 aa12.6□□□□□ -0.39
UBXN1-212ENST00000531625 IGHV3-30-5P0DP03 117 aa12.6□□□□□ -0.39
UBXN1-212ENST00000531625 ATRAIDQ6UW56 229 aa12.6□□□□□ -0.39
UBXN1-212ENST00000531625 RPL39LQ96EH5 51 aaKnown RBP12.6□□□□□ -0.39
UBXN1-212ENST00000531625 FAT3Q8TDW7 4589 aa12.6□□□□□ -0.39
UBXN1-212ENST00000531625 SMKR1H3BMG3 65 aa12.59□□□□□ -0.39
UBXN1-212ENST00000531625 NCR2O95944 276 aa12.59□□□□□ -0.39
UBXN1-212ENST00000531625 WFDC2Q14508 124 aa12.59□□□□□ -0.39
UBXN1-212ENST00000531625 MRPL51Q4U2R6 128 aaKnown RBP12.59□□□□□ -0.39
UBXN1-212ENST00000531625 SERTAD4-AS1Q5TG53 156 aa12.59□□□□□ -0.39
UBXN1-212ENST00000531625 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.59□□□□□ -0.39
UBXN1-212ENST00000531625 GAS8-AS1O95177 125 aa12.58□□□□□ -0.4
UBXN1-212ENST00000531625 DAZ4Q86SG3 579 aaKnown RBP12.57□□□□□ -0.4
UBXN1-212ENST00000531625 DAZ3Q9NR90 486 aaKnown RBP12.57□□□□□ -0.4
UBXN1-212ENST00000531625 UBR4Q5T4S7 5183 aa12.56□□□□□ -0.4
UBXN1-212ENST00000531625 TRAV8-3A0A0A6YYJ7 113 aa12.56□□□□□ -0.4
UBXN1-212ENST00000531625 CKS2P33552 79 aa12.56□□□□□ -0.4
UBXN1-212ENST00000531625 RPS10P46783 165 aaKnown RBP12.55□□□□□ -0.4
UBXN1-212ENST00000531625 TMEM136Q6ZRR5 245 aa12.54□□□□□ -0.4
UBXN1-212ENST00000531625 ST20Q9HBF5 79 aa12.54□□□□□ -0.4
UBXN1-212ENST00000531625 TGIF2-C20orf24A0A0A6YYL0 155 aa12.53□□□□□ -0.4
UBXN1-212ENST00000531625 D6R8Y8 96 aa12.53□□□□□ -0.4
UBXN1-212ENST00000531625 PPP1R17O96001 155 aa12.53□□□□□ -0.4
UBXN1-212ENST00000531625 SCXQ7RTU7 201 aa12.53□□□□□ -0.4
UBXN1-212ENST00000531625 TRBV6-5A0A0K0K1A5 114 aa12.52□□□□□ -0.41
UBXN1-212ENST00000531625 SDHAF1A6NFY7 115 aa12.52□□□□□ -0.41
UBXN1-212ENST00000531625 LECT2O14960 151 aa12.52□□□□□ -0.41
UBXN1-212ENST00000531625 KRTAP10-4P60372 401 aaPredicted RBP12.52□□□□□ -0.41
UBXN1-212ENST00000531625 ELOBQ15370 118 aa12.52□□□□□ -0.41
UBXN1-212ENST00000531625 TMEM97Q5BJF2 176 aa12.52□□□□□ -0.41
UBXN1-212ENST00000531625 CBLN2Q8IUK8 224 aa12.52□□□□□ -0.41
UBXN1-212ENST00000531625 Q8N3U1 123 aa12.52□□□□□ -0.41
UBXN1-212ENST00000531625 NRACQ8N912 160 aa12.52□□□□□ -0.41
UBXN1-212ENST00000531625 SMCO4Q9NRQ5 59 aa12.52□□□□□ -0.41
UBXN1-212ENST00000531625 COX11Q9Y6N1 276 aa12.52□□□□□ -0.41
UBXN1-212ENST00000531625 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.51□□□□□ -0.41
UBXN1-212ENST00000531625 TRBV6-8A0A0A6YYG3 113 aa12.51□□□□□ -0.41
UBXN1-212ENST00000531625 OXTP01178 125 aa12.51□□□□□ -0.41
UBXN1-212ENST00000531625 PPBPP02775 128 aa12.51□□□□□ -0.41
UBXN1-212ENST00000531625 ORMDL3Q8N138 153 aa12.51□□□□□ -0.41
UBXN1-212ENST00000531625 HLA-DQA1P01909 254 aa12.5□□□□□ -0.41
UBXN1-212ENST00000531625 APCSP02743 223 aa12.5□□□□□ -0.41
UBXN1-212ENST00000531625 COTL1Q14019 142 aa12.5□□□□□ -0.41
UBXN1-212ENST00000531625 COX19Q49B96 90 aa12.5□□□□□ -0.41
UBXN1-212ENST00000531625 CHAC1Q9BUX1 264 aa12.5□□□□□ -0.41
UBXN1-212ENST00000531625 GNB1LQ9BYB4 327 aa12.5□□□□□ -0.41
UBXN1-212ENST00000531625 PKHD1L1Q86WI1 4243 aa12.5□□□□□ -0.41
UBXN1-212ENST00000531625 TRBV24-1A0A075B6N3 115 aa12.49□□□□□ -0.41
UBXN1-212ENST00000531625 TNFRSF6BO95407 300 aa12.49□□□□□ -0.41
UBXN1-212ENST00000531625 PMCHP20382 165 aa12.49□□□□□ -0.41
UBXN1-212ENST00000531625 SUMO2P61956 95 aaKnown RBP12.49□□□□□ -0.41
UBXN1-212ENST00000531625 NTM-AS1Q6ZSK4 140 aa12.49□□□□□ -0.41
UBXN1-212ENST00000531625 BAALCQ8WXS3 180 aa12.49□□□□□ -0.41
UBXN1-212ENST00000531625 PRELID3AQ96N28 172 aa12.49□□□□□ -0.41
UBXN1-212ENST00000531625 TRBV25-1A0A075B6N4 114 aa12.48□□□□□ -0.41
UBXN1-212ENST00000531625 IGHV1-24A0A0C4DH33 117 aa12.48□□□□□ -0.41
UBXN1-212ENST00000531625 I3L3M4 83 aa12.48□□□□□ -0.41
UBXN1-212ENST00000531625 NPYP01303 97 aa12.48□□□□□ -0.41
UBXN1-212ENST00000531625 LINC01620Q4KN68 170 aa12.48□□□□□ -0.41
UBXN1-212ENST00000531625 Q8N976 141 aa12.48□□□□□ -0.41
UBXN1-212ENST00000531625 CHCHD5Q9BSY4 110 aa12.48□□□□□ -0.41
UBXN1-212ENST00000531625 MT-ND6P03923 174 aa12.47□□□□□ -0.41
UBXN1-212ENST00000531625 POLR2KP53803 58 aaKnown RBP12.47□□□□□ -0.41
UBXN1-212ENST00000531625 KIAA1644Q3SXP7 199 aa12.47□□□□□ -0.41
UBXN1-212ENST00000531625 RMI2Q96E14 147 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms