RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	TMEM263	Q8WUH6	116 aa	Known RBP	5.78	□□□□□ -1.48
CTNND1-223	ENST00000529986	COX7B	P24311	80 aa		5.78	□□□□□ -1.48
CTNND1-223	ENST00000529986	CXCL5	P42830	114 aa		5.78	□□□□□ -1.48
CTNND1-223	ENST00000529986	ZNF22	P17026	224 aa	Predicted RBP	5.77	□□□□□ -1.48
CTNND1-223	ENST00000529986	WT1	P19544	449 aa	Predicted RBP	5.77	□□□□□ -1.48
CTNND1-223	ENST00000529986	PRR4	Q16378	134 aa		5.77	□□□□□ -1.48
CTNND1-223	ENST00000529986	C1orf229	Q6ZS94	237 aa	Predicted RBP	5.77	□□□□□ -1.48
CTNND1-223	ENST00000529986		Q8N7P7	452 aa		5.77	□□□□□ -1.48
CTNND1-223	ENST00000529986	PLXNB1	O43157	2135 aa		5.77	□□□□□ -1.49
CTNND1-223	ENST00000529986	IGKV4-1	P06312	121 aa		5.77	□□□□□ -1.49
CTNND1-223	ENST00000529986	CRIP1	P50238	77 aa		5.77	□□□□□ -1.49
CTNND1-223	ENST00000529986	TMEM223	A0PJW6	202 aa		5.77	□□□□□ -1.49
CTNND1-223	ENST00000529986	MSMP	Q1L6U9	139 aa		5.77	□□□□□ -1.49
CTNND1-223	ENST00000529986	LINC00467	Q9BRT7	94 aa		5.77	□□□□□ -1.49
CTNND1-223	ENST00000529986	MUC22	E2RYF6	1773 aa	Predicted RBP	5.77	□□□□□ -1.49
CTNND1-223	ENST00000529986	IGLV1-47	P01700	117 aa		5.77	□□□□□ -1.49
CTNND1-223	ENST00000529986	CFAP126	Q5VTH2	177 aa		5.77	□□□□□ -1.49
CTNND1-223	ENST00000529986		A0A096LNI7	61 aa		5.76	□□□□□ -1.49
CTNND1-223	ENST00000529986	UBE2A	P49459	152 aa		5.76	□□□□□ -1.49
CTNND1-223	ENST00000529986	HRCT1	Q6UXD1	115 aa		5.76	□□□□□ -1.49
CTNND1-223	ENST00000529986	LINC00308	Q8TCZ7	52 aa		5.76	□□□□□ -1.49
CTNND1-223	ENST00000529986	ZFP36	P26651	326 aa	Known RBP	5.76	□□□□□ -1.49
CTNND1-223	ENST00000529986		A0A0J9YWU9	116 aa		5.76	□□□□□ -1.49
CTNND1-223	ENST00000529986	USP17L23	D6RBM5	183 aa		5.76	□□□□□ -1.49
CTNND1-223	ENST00000529986	IGHV4-30-2	A0A087WSY4	118 aa		5.75	□□□□□ -1.49
CTNND1-223	ENST00000529986	LINC01548	A6NM66	108 aa		5.75	□□□□□ -1.49
CTNND1-223	ENST00000529986	WISP2	O76076	250 aa		5.75	□□□□□ -1.49
CTNND1-223	ENST00000529986	IMUP	Q9GZP8	106 aa		5.75	□□□□□ -1.49
CTNND1-223	ENST00000529986	IGLV4-3	A0A075B6K6	122 aa		5.75	□□□□□ -1.49
CTNND1-223	ENST00000529986		A0A0J9YX75	114 aa		5.75	□□□□□ -1.49
CTNND1-223	ENST00000529986	TRBV30	A0A0K0K1B3	111 aa		5.75	□□□□□ -1.49
CTNND1-223	ENST00000529986	RNF185	Q96GF1	192 aa		5.75	□□□□□ -1.49
CTNND1-223	ENST00000529986	SERP2	Q8N6R1	65 aa		5.75	□□□□□ -1.49
CTNND1-223	ENST00000529986	TIMM17B	O60830	172 aa		5.75	□□□□□ -1.49
CTNND1-223	ENST00000529986	SPART-AS1	P0CW21	52 aa		5.75	□□□□□ -1.49
CTNND1-223	ENST00000529986	PDE6G	P18545	87 aa		5.75	□□□□□ -1.49
CTNND1-223	ENST00000529986	DEFB113	Q30KQ7	82 aa		5.75	□□□□□ -1.49
CTNND1-223	ENST00000529986	CRIP3	Q6Q6R5	217 aa		5.75	□□□□□ -1.49
CTNND1-223	ENST00000529986	DCANP1	Q8TF63	244 aa		5.75	□□□□□ -1.49
CTNND1-223	ENST00000529986	DEFB135	Q30KP9	77 aa		5.74	□□□□□ -1.49
CTNND1-223	ENST00000529986		Q6ZS46	218 aa		5.74	□□□□□ -1.49
CTNND1-223	ENST00000529986	CCDC140	Q96MF4	163 aa		5.74	□□□□□ -1.49
CTNND1-223	ENST00000529986	LYRM9	A8MSI8	78 aa		5.74	□□□□□ -1.49
CTNND1-223	ENST00000529986	WFDC10B	Q8IUB3	73 aa		5.74	□□□□□ -1.49
CTNND1-223	ENST00000529986	GAS8-AS1	O95177	125 aa		5.74	□□□□□ -1.49
CTNND1-223	ENST00000529986	PROK1	P58294	105 aa		5.74	□□□□□ -1.49
CTNND1-223	ENST00000529986		Q6ZTI0	123 aa		5.74	□□□□□ -1.49
CTNND1-223	ENST00000529986	NRGN	Q92686	78 aa		5.74	□□□□□ -1.49
CTNND1-223	ENST00000529986	LINC00269	Q8N2A0	174 aa		5.74	□□□□□ -1.49
CTNND1-223	ENST00000529986	ZFAND2A	Q8N6M9	145 aa		5.74	□□□□□ -1.49
CTNND1-223	ENST00000529986	COX7C	P15954	63 aa		5.73	□□□□□ -1.49
CTNND1-223	ENST00000529986	C1orf195	Q5TG92	126 aa		5.73	□□□□□ -1.49
CTNND1-223	ENST00000529986	SPRY4	Q9C004	299 aa		5.73	□□□□□ -1.49
CTNND1-223	ENST00000529986	C3orf84	H3BNL1	204 aa		5.73	□□□□□ -1.49
CTNND1-223	ENST00000529986	TANC2	Q9HCD6	1990 aa		5.73	□□□□□ -1.49
CTNND1-223	ENST00000529986	NUP210L	Q5VU65	1888 aa		5.73	□□□□□ -1.49
CTNND1-223	ENST00000529986		K7EMT4	169 aa		5.73	□□□□□ -1.49
CTNND1-223	ENST00000529986	HIGD2A	Q9BW72	106 aa		5.73	□□□□□ -1.49
CTNND1-223	ENST00000529986	LRCOL1	A6NCL2	159 aa		5.73	□□□□□ -1.49
CTNND1-223	ENST00000529986		Q6Q795	121 aa		5.73	□□□□□ -1.49
CTNND1-223	ENST00000529986	IL17D	Q8TAD2	202 aa		5.73	□□□□□ -1.49
CTNND1-223	ENST00000529986		F8W735	103 aa	Predicted RBP	5.72	□□□□□ -1.49
CTNND1-223	ENST00000529986	LINC00310	P59036	64 aa		5.72	□□□□□ -1.49
CTNND1-223	ENST00000529986	SEC61G	P60059	68 aa		5.72	□□□□□ -1.49
CTNND1-223	ENST00000529986	GPHB5	Q86YW7	130 aa		5.72	□□□□□ -1.49
CTNND1-223	ENST00000529986	IGKV2-24	A0A0C4DH68	120 aa		5.72	□□□□□ -1.49
CTNND1-223	ENST00000529986	NDUFC1	O43677	76 aa		5.72	□□□□□ -1.49
CTNND1-223	ENST00000529986	ZFAND3	Q9H8U3	227 aa		5.72	□□□□□ -1.49
CTNND1-223	ENST00000529986		U3KQK5	164 aa		5.72	□□□□□ -1.49
CTNND1-223	ENST00000529986	XAGE1A	Q9HD64	81 aa		5.72	□□□□□ -1.49
CTNND1-223	ENST00000529986	NCOA6	Q14686	2063 aa	Predicted RBP	5.72	□□□□□ -1.49
CTNND1-223	ENST00000529986	C6orf99	Q4VX62	202 aa		5.72	□□□□□ -1.49
CTNND1-223	ENST00000529986	C1orf158	Q8N1D5	194 aa		5.72	□□□□□ -1.49
CTNND1-223	ENST00000529986	ALPK3	Q96L96	1907 aa		5.72	□□□□□ -1.49
CTNND1-223	ENST00000529986		H7C423	109 aa		5.71	□□□□□ -1.49
CTNND1-223	ENST00000529986	ATP5EP2	Q5VTU8	51 aa		5.71	□□□□□ -1.49
CTNND1-223	ENST00000529986	POM121L12	Q8N7R1	296 aa		5.71	□□□□□ -1.49
CTNND1-223	ENST00000529986	CCL18	P55774	89 aa		5.71	□□□□□ -1.5
CTNND1-223	ENST00000529986		Q8N976	141 aa		5.71	□□□□□ -1.5
CTNND1-223	ENST00000529986		A6NED7	52 aa		5.71	□□□□□ -1.5
CTNND1-223	ENST00000529986	MAP6D1	Q9H9H5	199 aa		5.71	□□□□□ -1.5
CTNND1-223	ENST00000529986	ADAMTS9	Q9P2N4	1935 aa		5.71	□□□□□ -1.5
CTNND1-223	ENST00000529986	PRR14L	Q5THK1	2151 aa		5.71	□□□□□ -1.5
CTNND1-223	ENST00000529986	SMIM9	A6NGZ8	99 aa		5.71	□□□□□ -1.5
CTNND1-223	ENST00000529986	CCK	P06307	115 aa		5.71	□□□□□ -1.5
CTNND1-223	ENST00000529986	SMAD5-AS1	Q9Y6J3	95 aa		5.71	□□□□□ -1.5
CTNND1-223	ENST00000529986	LST1	O00453	97 aa		5.7	□□□□□ -1.5
CTNND1-223	ENST00000529986	IGLV2-11	P01706	119 aa		5.7	□□□□□ -1.5
CTNND1-223	ENST00000529986	SOSTDC1	Q6X4U4	206 aa		5.7	□□□□□ -1.5
CTNND1-223	ENST00000529986	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	5.7	□□□□□ -1.5
CTNND1-223	ENST00000529986	KIAA1549	Q9HCM3	1950 aa		5.7	□□□□□ -1.5
CTNND1-223	ENST00000529986	TTC28	Q96AY4	2481 aa		5.7	□□□□□ -1.5
CTNND1-223	ENST00000529986	TRBV10-1	A0A0K0K1A3	114 aa		5.7	□□□□□ -1.5
CTNND1-223	ENST00000529986	MRPS36	P82909	103 aa	Known RBP	5.7	□□□□□ -1.5
CTNND1-223	ENST00000529986	REG3A	Q06141	175 aa		5.7	□□□□□ -1.5
CTNND1-223	ENST00000529986	MUC6	Q6W4X9	2439 aa		5.7	□□□□□ -1.5
CTNND1-223	ENST00000529986	PTPRQ	Q9UMZ3	2332 aa		5.7	□□□□□ -1.5
CTNND1-223	ENST00000529986		M0QY20	66 aa		5.7	□□□□□ -1.5
CTNND1-223	ENST00000529986	MED12L	Q86YW9	2145 aa		5.7	□□□□□ -1.5
CTNND1-223	ENST00000529986	TRBV27	A0A0K0K1C4	114 aa		5.7	□□□□□ -1.5

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