RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SSBP1Q04837 148 aaKnown RBP1.54□□□□□ -2.16
C11orf88-204ENST00000529661 Q0VG73 95 aa1.54□□□□□ -2.16
C11orf88-204ENST00000529661 C20orf197Q8N268 126 aa1.54□□□□□ -2.16
C11orf88-204ENST00000529661 VAMP8Q9BV40 100 aa1.54□□□□□ -2.16
C11orf88-204ENST00000529661 MED14O60244 1454 aa1.54□□□□□ -2.16
C11orf88-204ENST00000529661 PRDM15P57071 1507 aaPredicted RBP1.54□□□□□ -2.16
C11orf88-204ENST00000529661 MARF1Q9Y4F3 1742 aaKnown RBP1.54□□□□□ -2.16
C11orf88-204ENST00000529661 PPLO60437 1756 aa1.54□□□□□ -2.16
C11orf88-204ENST00000529661 RGPD3A6NKT7 1758 aaPredicted RBP1.53□□□□□ -2.16
C11orf88-204ENST00000529661 NCOA6Q14686 2063 aaPredicted RBP1.53□□□□□ -2.16
C11orf88-204ENST00000529661 ZNF56Q15929 161 aa1.53□□□□□ -2.16
C11orf88-204ENST00000529661 C9orf62Q8N4C0 152 aa1.53□□□□□ -2.16
C11orf88-204ENST00000529661 BET1LQ9NYM9 111 aa1.53□□□□□ -2.16
C11orf88-204ENST00000529661 ABCC3O15438 1527 aa1.52□□□□□ -2.17
C11orf88-204ENST00000529661 TRBV7-3A0A075B6L6 115 aa1.52□□□□□ -2.17
C11orf88-204ENST00000529661 IGLC1P0CG04 106 aa1.52□□□□□ -2.17
C11orf88-204ENST00000529661 GNG11P61952 73 aa1.52□□□□□ -2.17
C11orf88-204ENST00000529661 KLKP1Q107X0 134 aa1.52□□□□□ -2.17
C11orf88-204ENST00000529661 C10orf128Q5T292 105 aa1.52□□□□□ -2.17
C11orf88-204ENST00000529661 FAM74A4Q5TZK3 123 aa1.52□□□□□ -2.17
C11orf88-204ENST00000529661 Q6ZQY7 126 aa1.52□□□□□ -2.17
C11orf88-204ENST00000529661 COX7B2Q8TF08 81 aa1.52□□□□□ -2.17
C11orf88-204ENST00000529661 TECTAO75443 2155 aa1.52□□□□□ -2.17
C11orf88-204ENST00000529661 MYOM1P52179 1685 aa1.51□□□□□ -2.17
C11orf88-204ENST00000529661 SHANK2Q9UPX8 1470 aa1.51□□□□□ -2.17
C11orf88-204ENST00000529661 hADV29S1A0JD25 119 aa1.51□□□□□ -2.17
C11orf88-204ENST00000529661 GNGT2O14610 69 aa1.51□□□□□ -2.17
C11orf88-204ENST00000529661 CAV3P56539 151 aa1.51□□□□□ -2.17
C11orf88-204ENST00000529661 ELOF1P60002 83 aaKnown RBP1.51□□□□□ -2.17
C11orf88-204ENST00000529661 FAM167A-AS1Q96KT0 104 aa1.51□□□□□ -2.17
C11orf88-204ENST00000529661 LINC00208Q96KT6 92 aa1.51□□□□□ -2.17
C11orf88-204ENST00000529661 SCP2D1Q9UJQ7 156 aa1.51□□□□□ -2.17
C11orf88-204ENST00000529661 FLG2Q5D862 2391 aaPredicted RBP1.51□□□□□ -2.17
C11orf88-204ENST00000529661 DIP2CQ9Y2E4 1556 aa1.51□□□□□ -2.17
C11orf88-204ENST00000529661 GOLGA3Q08378 1498 aa1.5□□□□□ -2.17
C11orf88-204ENST00000529661 PDCD11Q14690 1871 aaKnown RBP1.5□□□□□ -2.17
C11orf88-204ENST00000529661 ANKRD36BQ8N2N9 1353 aa1.5□□□□□ -2.17
C11orf88-204ENST00000529661 MON2Q7Z3U7 1717 aa1.5□□□□□ -2.17
C11orf88-204ENST00000529661 C10orf99Q6UWK7 81 aa1.5□□□□□ -2.17
C11orf88-204ENST00000529661 MGST2Q99735 147 aa1.5□□□□□ -2.17
C11orf88-204ENST00000529661 PMCHL2Q9BQD1 86 aa1.5□□□□□ -2.17
C11orf88-204ENST00000529661 LENEPQ9Y5L5 61 aa1.5□□□□□ -2.17
C11orf88-204ENST00000529661 ARHGEF12Q9NZN5 1544 aa1.5□□□□□ -2.17
C11orf88-204ENST00000529661 WNK3Q9BYP7 1800 aa1.5□□□□□ -2.17
C11orf88-204ENST00000529661 CLTCQ00610 1675 aaKnown RBP1.49□□□□□ -2.17
C11orf88-204ENST00000529661 COL4A6Q14031 1691 aa1.49□□□□□ -2.17
C11orf88-204ENST00000529661 TOP2BQ02880 1626 aa1.49□□□□□ -2.17
C11orf88-204ENST00000529661 ATOX1O00244 68 aa1.49□□□□□ -2.17
C11orf88-204ENST00000529661 ASIPP42127 132 aa1.49□□□□□ -2.17
C11orf88-204ENST00000529661 EDDM3BP56851 147 aa1.49□□□□□ -2.17
C11orf88-204ENST00000529661 LINC00575Q6W349 94 aa1.49□□□□□ -2.17
C11orf88-204ENST00000529661 FAM213BQ8TBF2 198 aa1.49□□□□□ -2.17
C11orf88-204ENST00000529661 TSLPQ969D9 159 aa1.49□□□□□ -2.17
C11orf88-204ENST00000529661 CCL19Q99731 98 aa1.49□□□□□ -2.17
C11orf88-204ENST00000529661 FBN3Q75N90 2809 aa1.49□□□□□ -2.17
C11orf88-204ENST00000529661 CCDC18Q5T9S5 1454 aa1.49□□□□□ -2.17
C11orf88-204ENST00000529661 ABCA1O95477 2261 aa1.49□□□□□ -2.17
C11orf88-204ENST00000529661 A0A087WTM6 91 aa1.48□□□□□ -2.17
C11orf88-204ENST00000529661 FXYD1O00168 92 aa1.48□□□□□ -2.17
C11orf88-204ENST00000529661 NDUFC1O43677 76 aa1.48□□□□□ -2.17
C11orf88-204ENST00000529661 UBE2D3P61077 147 aa1.48□□□□□ -2.17
C11orf88-204ENST00000529661 UBE2D2P62837 147 aa1.48□□□□□ -2.17
C11orf88-204ENST00000529661 C6orf52Q5T4I8 152 aa1.48□□□□□ -2.17
C11orf88-204ENST00000529661 Q6ZSA8 131 aa1.48□□□□□ -2.17
C11orf88-204ENST00000529661 Q86TA4 180 aa1.48□□□□□ -2.17
C11orf88-204ENST00000529661 V9GYV3 84 aa1.48□□□□□ -2.17
C11orf88-204ENST00000529661 PLEKHH2Q8IVE3 1493 aa1.48□□□□□ -2.17
C11orf88-204ENST00000529661 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.47□□□□□ -2.17
C11orf88-204ENST00000529661 TRBV7-7A0A0K0K1E9 115 aa1.47□□□□□ -2.17
C11orf88-204ENST00000529661 CRYM-AS1A6NIL9 109 aa1.47□□□□□ -2.17
C11orf88-204ENST00000529661 NCR3O14931 201 aa1.47□□□□□ -2.17
C11orf88-204ENST00000529661 SFT2D2O95562 160 aa1.47□□□□□ -2.17
C11orf88-204ENST00000529661 GYPAP02724 150 aa1.47□□□□□ -2.17
C11orf88-204ENST00000529661 SEC11AP67812 179 aa1.47□□□□□ -2.17
C11orf88-204ENST00000529661 Q5VV11 94 aa1.47□□□□□ -2.17
C11orf88-204ENST00000529661 DYNLRB1Q9NP97 96 aa1.47□□□□□ -2.17
C11orf88-204ENST00000529661 NDUFA4L2Q9NRX3 87 aa1.47□□□□□ -2.17
C11orf88-204ENST00000529661 TMEM14BQ9NUH8 114 aa1.47□□□□□ -2.17
C11orf88-204ENST00000529661 ARHGEF5Q12774 1597 aa1.47□□□□□ -2.17
C11orf88-204ENST00000529661 MYH4Q9Y623 1939 aa1.46□□□□□ -2.18
C11orf88-204ENST00000529661 ARHGAP35Q9NRY4 1499 aa1.46□□□□□ -2.18
C11orf88-204ENST00000529661 LOC285095A0A1B0GVY8 99 aa1.46□□□□□ -2.18
C11orf88-204ENST00000529661 EFNA4P52798 201 aa1.46□□□□□ -2.18
C11orf88-204ENST00000529661 NPVFQ9HCQ7 196 aa1.46□□□□□ -2.18
C11orf88-204ENST00000529661 FAIMQ9NVQ4 179 aa1.46□□□□□ -2.18
C11orf88-204ENST00000529661 UQCR10Q9UDW1 63 aa1.46□□□□□ -2.18
C11orf88-204ENST00000529661 PRO1854Q9UHT4 67 aa1.46□□□□□ -2.18
C11orf88-204ENST00000529661 MYO7BQ6PIF6 2116 aa1.46□□□□□ -2.18
C11orf88-204ENST00000529661 IFT172Q9UG01 1749 aa1.46□□□□□ -2.18
C11orf88-204ENST00000529661 MRC1P22897 1456 aa1.45□□□□□ -2.18
C11orf88-204ENST00000529661 MLH3Q9UHC1 1453 aa1.45□□□□□ -2.18
C11orf88-204ENST00000529661 TRAV22A0A0B4J277 110 aa1.45□□□□□ -2.18
C11orf88-204ENST00000529661 TRBV30A0A0K0K1B3 111 aa1.45□□□□□ -2.18
C11orf88-204ENST00000529661 PPP1R17O96001 155 aa1.45□□□□□ -2.18
C11orf88-204ENST00000529661 CCL18P55774 89 aa1.45□□□□□ -2.18
C11orf88-204ENST00000529661 PYY3Q5JQD4 70 aa1.45□□□□□ -2.18
C11orf88-204ENST00000529661 SERP2Q8N6R1 65 aa1.45□□□□□ -2.18
C11orf88-204ENST00000529661 LCN9Q8WX39 176 aa1.45□□□□□ -2.18
C11orf88-204ENST00000529661 TRGV9Q99603 122 aa1.45□□□□□ -2.18
C11orf88-204ENST00000529661 WFDC6Q9BQY6 131 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms