RNA–Protein interactions for RNA: ENST00000525725.5

PACSIN3-203, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-203ENST00000525725 PEA15Q15121 130 aa13.67□□□□□ -0.22
PACSIN3-203ENST00000525725 SUMO4Q6EEV6 95 aa13.67□□□□□ -0.22
PACSIN3-203ENST00000525725 F2Z2F3 143 aa13.66□□□□□ -0.22
PACSIN3-203ENST00000525725 FAM231DQ6ZW35 169 aa13.66□□□□□ -0.22
PACSIN3-203ENST00000525725 GTSF1Q8WW33 167 aa13.66□□□□□ -0.22
PACSIN3-203ENST00000525725 IGHV1-24A0A0C4DH33 117 aa13.65□□□□□ -0.22
PACSIN3-203ENST00000525725 CTRLP40313 264 aa13.65□□□□□ -0.22
PACSIN3-203ENST00000525725 GAGE6Q13070 117 aa13.65□□□□□ -0.22
PACSIN3-203ENST00000525725 CLPSL2Q6UWE3 100 aa13.65□□□□□ -0.22
PACSIN3-203ENST00000525725 LINC00269Q8N2A0 174 aa13.65□□□□□ -0.22
PACSIN3-203ENST00000525725 H7C1H1 209 aa13.64□□□□□ -0.23
PACSIN3-203ENST00000525725 NTF3P20783 257 aa13.64□□□□□ -0.23
PACSIN3-203ENST00000525725 TMEM241Q24JQ0 296 aa13.64□□□□□ -0.23
PACSIN3-203ENST00000525725 DGAT2L7PQ6IED9 249 aa13.64□□□□□ -0.23
PACSIN3-203ENST00000525725 C9orf163Q8N9P6 203 aa13.64□□□□□ -0.23
PACSIN3-203ENST00000525725 MGPP08493 103 aa13.63□□□□□ -0.23
PACSIN3-203ENST00000525725 C20orf203Q8NBC4 194 aa13.63□□□□□ -0.23
PACSIN3-203ENST00000525725 PGLYRP4Q96LB8 373 aa13.63□□□□□ -0.23
PACSIN3-203ENST00000525725 CNFNQ9BYD5 112 aa13.63□□□□□ -0.23
PACSIN3-203ENST00000525725 RAB14P61106 215 aa13.62□□□□□ -0.23
PACSIN3-203ENST00000525725 TWIST1Q15672 202 aa13.62□□□□□ -0.23
PACSIN3-203ENST00000525725 FAM74A3Q4VXF1 159 aa13.62□□□□□ -0.23
PACSIN3-203ENST00000525725 A0A1B0GUV1 79 aa13.61□□□□□ -0.23
PACSIN3-203ENST00000525725 RPL23P62829 140 aaKnown RBP13.61□□□□□ -0.23
PACSIN3-203ENST00000525725 REG3AQ06141 175 aa13.61□□□□□ -0.23
PACSIN3-203ENST00000525725 WDR73Q6P4I2 378 aa13.61□□□□□ -0.23
PACSIN3-203ENST00000525725 RASL11AQ6T310 242 aa13.61□□□□□ -0.23
PACSIN3-203ENST00000525725 SMDT1Q9H4I9 107 aa13.61□□□□□ -0.23
PACSIN3-203ENST00000525725 A8MWL6 223 aa13.6□□□□□ -0.23
PACSIN3-203ENST00000525725 TRGC1P0CF51 173 aa13.6□□□□□ -0.23
PACSIN3-203ENST00000525725 CNBPP62633 177 aaKnown RBP13.6□□□□□ -0.23
PACSIN3-203ENST00000525725 IFITM2Q01629 132 aa13.6□□□□□ -0.23
PACSIN3-203ENST00000525725 CIRBPQ14011 172 aaKnown RBP13.6□□□□□ -0.23
PACSIN3-203ENST00000525725 GFRA4Q9GZZ7 299 aa13.6□□□□□ -0.23
PACSIN3-203ENST00000525725 OSTCQ9NRP0 149 aa13.6□□□□□ -0.23
PACSIN3-203ENST00000525725 NAT8Q9UHE5 227 aa13.6□□□□□ -0.23
PACSIN3-203ENST00000525725 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.6□□□□□ -0.23
PACSIN3-203ENST00000525725 UBR4Q5T4S7 5183 aa13.6□□□□□ -0.23
PACSIN3-203ENST00000525725 PANO1I0J062 215 aa13.59□□□□□ -0.23
PACSIN3-203ENST00000525725 OXTP01178 125 aa13.59□□□□□ -0.23
PACSIN3-203ENST00000525725 ADIRFQ15847 76 aa13.59□□□□□ -0.23
PACSIN3-203ENST00000525725 CT83Q5H943 113 aa13.59□□□□□ -0.23
PACSIN3-203ENST00000525725 ISOC2Q96AB3 205 aa13.59□□□□□ -0.23
PACSIN3-203ENST00000525725 TMEM243Q9BU79 118 aa13.59□□□□□ -0.23
PACSIN3-203ENST00000525725 DPH3P1Q9H4G8 78 aa13.59□□□□□ -0.23
PACSIN3-203ENST00000525725 IGLV4-60A0A075B6I1 120 aa13.58□□□□□ -0.24
PACSIN3-203ENST00000525725 FOXA3P55318 350 aaPredicted RBP13.58□□□□□ -0.24
PACSIN3-203ENST00000525725 CLRN3Q8NCR9 226 aa13.58□□□□□ -0.24
PACSIN3-203ENST00000525725 TRAV8-4A0A0B4J246 113 aa13.57□□□□□ -0.24
PACSIN3-203ENST00000525725 SDIM1Q6ZPB5 146 aa13.57□□□□□ -0.24
PACSIN3-203ENST00000525725 TSKUQ8WUA8 353 aa13.57□□□□□ -0.24
PACSIN3-203ENST00000525725 NIT2Q9NQR4 276 aa13.57□□□□□ -0.24
PACSIN3-203ENST00000525725 V9GYV3 84 aa13.57□□□□□ -0.24
PACSIN3-203ENST00000525725 HNRNPA3P51991 378 aaKnown RBP13.56□□□□□ -0.24
PACSIN3-203ENST00000525725 RPL37AP61513 92 aaKnown RBP13.56□□□□□ -0.24
PACSIN3-203ENST00000525725 CLLU1Q5K131 121 aa13.56□□□□□ -0.24
PACSIN3-203ENST00000525725 IGLV10-54A0A075B6I4 117 aa13.55□□□□□ -0.24
PACSIN3-203ENST00000525725 HIGD1CA8MV81 97 aa13.55□□□□□ -0.24
PACSIN3-203ENST00000525725 TRAV26-2A0A0B4J265 109 aa13.52□□□□□ -0.25
PACSIN3-203ENST00000525725 TNXBP22105 4242 aa13.52□□□□□ -0.25
PACSIN3-203ENST00000525725 SLPIP03973 132 aa13.51□□□□□ -0.25
PACSIN3-203ENST00000525725 COTL1Q14019 142 aa13.51□□□□□ -0.25
PACSIN3-203ENST00000525725 SMIM15Q7Z3B0 74 aa13.51□□□□□ -0.25
PACSIN3-203ENST00000525725 GATD1Q8NB37 220 aa13.51□□□□□ -0.25
PACSIN3-203ENST00000525725 NUP35Q8NFH5 326 aa13.51□□□□□ -0.25
PACSIN3-203ENST00000525725 BORCS7Q96B45 105 aa13.51□□□□□ -0.25
PACSIN3-203ENST00000525725 A0A1B0GUT8 65 aa13.5□□□□□ -0.25
PACSIN3-203ENST00000525725 hDV102S1A0JD36 115 aa13.5□□□□□ -0.25
PACSIN3-203ENST00000525725 FAM231BA6NCW3 169 aa13.5□□□□□ -0.25
PACSIN3-203ENST00000525725 AMTP48728 403 aa13.5□□□□□ -0.25
PACSIN3-203ENST00000525725 C15orf56Q8N910 161 aa13.5□□□□□ -0.25
PACSIN3-203ENST00000525725 SERTAD4-AS1Q5TG53 156 aa13.49□□□□□ -0.25
PACSIN3-203ENST00000525725 UBE2L6O14933 153 aa13.47□□□□□ -0.25
PACSIN3-203ENST00000525725 SPACA4Q8TDM5 124 aa13.47□□□□□ -0.25
PACSIN3-203ENST00000525725 RPL39LQ96EH5 51 aaKnown RBP13.47□□□□□ -0.25
PACSIN3-203ENST00000525725 NAT8BQ9UHF3 227 aa13.47□□□□□ -0.25
PACSIN3-203ENST00000525725 IGHV3-64A0A075B6Q5 118 aa13.46□□□□□ -0.25
PACSIN3-203ENST00000525725 SMIM27A0A1W2PRY6 76 aa13.46□□□□□ -0.25
PACSIN3-203ENST00000525725 NCR2O95944 276 aa13.46□□□□□ -0.25
PACSIN3-203ENST00000525725 RNF185Q96GF1 192 aa13.46□□□□□ -0.25
PACSIN3-203ENST00000525725 GAS8-AS1O95177 125 aa13.45□□□□□ -0.26
PACSIN3-203ENST00000525725 RIGQ13278 110 aa13.45□□□□□ -0.26
PACSIN3-203ENST00000525725 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.44□□□□□ -0.26
PACSIN3-203ENST00000525725 TMEM191AQ9H0A3 160 aa13.44□□□□□ -0.26
PACSIN3-203ENST00000525725 AP5S1Q9NUS5 200 aa13.44□□□□□ -0.26
PACSIN3-203ENST00000525725 H7C423 109 aa13.43□□□□□ -0.26
PACSIN3-203ENST00000525725 CHTF8P0CG12 524 aa13.43□□□□□ -0.26
PACSIN3-203ENST00000525725 MT1HL1P0DM35 61 aa13.43□□□□□ -0.26
PACSIN3-203ENST00000525725 AMN1Q8IY45 258 aa13.43□□□□□ -0.26
PACSIN3-203ENST00000525725 A0A087WYN8 130 aa13.41□□□□□ -0.26
PACSIN3-203ENST00000525725 TRBV6-5A0A0K0K1A5 114 aa13.41□□□□□ -0.26
PACSIN3-203ENST00000525725 GAGE12HA6NDE8 117 aa13.41□□□□□ -0.26
PACSIN3-203ENST00000525725 SDHAF1A6NFY7 115 aa13.41□□□□□ -0.26
PACSIN3-203ENST00000525725 RAB4AP20338 218 aa13.41□□□□□ -0.26
PACSIN3-203ENST00000525725 PLAC8Q9NZF1 115 aa13.41□□□□□ -0.26
PACSIN3-203ENST00000525725 GVQW2A0A096LPI5 108 aaPredicted RBP13.4□□□□□ -0.26
PACSIN3-203ENST00000525725 APCSP02743 223 aa13.4□□□□□ -0.26
PACSIN3-203ENST00000525725 CAMPP49913 170 aa13.4□□□□□ -0.26
PACSIN3-203ENST00000525725 CHCHD10Q8WYQ3 142 aaPredicted RBP13.4□□□□□ -0.26
PACSIN3-203ENST00000525725 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms