RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 GAGE12JA6NER3 117 aa7.33□□□□□ -1.24
PVT1-216ENST00000523068 SMIM17P0DL12 118 aa7.33□□□□□ -1.24
PVT1-216ENST00000523068 NDUFA6P56556 154 aa7.33□□□□□ -1.24
PVT1-216ENST00000523068 GAGE1Q13065 139 aa7.33□□□□□ -1.24
PVT1-216ENST00000523068 GAGE4Q13068 117 aa7.33□□□□□ -1.24
PVT1-216ENST00000523068 GAGE5Q13069 117 aa7.33□□□□□ -1.24
PVT1-216ENST00000523068 LAGE3Q14657 143 aa7.33□□□□□ -1.24
PVT1-216ENST00000523068 GAGE13Q4V321 117 aa7.33□□□□□ -1.24
PVT1-216ENST00000523068 FAM74A4Q5TZK3 123 aa7.33□□□□□ -1.24
PVT1-216ENST00000523068 UFSP1Q6NVU6 142 aa7.33□□□□□ -1.24
PVT1-216ENST00000523068 Q6ZSN1 163 aa7.33□□□□□ -1.24
PVT1-216ENST00000523068 JPT2Q9H910 190 aa7.33□□□□□ -1.24
PVT1-216ENST00000523068 SCRT2Q9NQ03 307 aa7.33□□□□□ -1.24
PVT1-216ENST00000523068 PHOX2AO14813 284 aa7.32□□□□□ -1.24
PVT1-216ENST00000523068 IGHV3-30P01768 117 aa7.32□□□□□ -1.24
PVT1-216ENST00000523068 IGHV3-33P01772 117 aa7.32□□□□□ -1.24
PVT1-216ENST00000523068 LINC00694P0DN24 101 aa7.32□□□□□ -1.24
PVT1-216ENST00000523068 IGHV3-30-3P0DP02 117 aa7.32□□□□□ -1.24
PVT1-216ENST00000523068 IGHV3-30-5P0DP03 117 aa7.32□□□□□ -1.24
PVT1-216ENST00000523068 KIAA1644Q3SXP7 199 aa7.32□□□□□ -1.24
PVT1-216ENST00000523068 FAM104BQ5XKR9 115 aa7.32□□□□□ -1.24
PVT1-216ENST00000523068 SAMD10Q9BYL1 202 aa7.32□□□□□ -1.24
PVT1-216ENST00000523068 KRTAP4-5Q9BYR2 181 aa7.32□□□□□ -1.24
PVT1-216ENST00000523068 Q9HAA7 133 aa7.32□□□□□ -1.24
PVT1-216ENST00000523068 DNAH5Q8TE73 4624 aa7.32□□□□□ -1.24
PVT1-216ENST00000523068 PPBPP02775 128 aa7.31□□□□□ -1.24
PVT1-216ENST00000523068 BAGE3Q86Y29 109 aa7.31□□□□□ -1.24
PVT1-216ENST00000523068 AMN1Q8IY45 258 aa7.31□□□□□ -1.24
PVT1-216ENST00000523068 C14orf178Q8N769 122 aaPredicted RBP7.31□□□□□ -1.24
PVT1-216ENST00000523068 NTN5Q8WTR8 489 aaPredicted RBP7.31□□□□□ -1.24
PVT1-216ENST00000523068 TM2D2Q9BX73 214 aa7.31□□□□□ -1.24
PVT1-216ENST00000523068 DPH3P1Q9H4G8 78 aa7.31□□□□□ -1.24
PVT1-216ENST00000523068 APOBP04114 4563 aaKnown RBP7.3□□□□□ -1.24
PVT1-216ENST00000523068 A0A087WWL8 130 aa7.3□□□□□ -1.24
PVT1-216ENST00000523068 TRAV8-3A0A0A6YYJ7 113 aa7.3□□□□□ -1.24
PVT1-216ENST00000523068 TRBV10-1A0A0K0K1A3 114 aa7.3□□□□□ -1.24
PVT1-216ENST00000523068 GCSHP23434 173 aa7.3□□□□□ -1.24
PVT1-216ENST00000523068 CKS2P33552 79 aa7.3□□□□□ -1.24
PVT1-216ENST00000523068 FUSP35637 526 aaKnown RBP eCLIP7.3□□□□□ -1.24
PVT1-216ENST00000523068 ORMDL3Q8N138 153 aa7.3□□□□□ -1.24
PVT1-216ENST00000523068 LRCOL1A6NCL2 159 aa7.29□□□□□ -1.24
PVT1-216ENST00000523068 MGPP08493 103 aa7.29□□□□□ -1.24
PVT1-216ENST00000523068 S100A2P29034 98 aa7.29□□□□□ -1.24
PVT1-216ENST00000523068 SNRPEP62304 92 aaKnown RBP7.29□□□□□ -1.24
PVT1-216ENST00000523068 RPL36AP83881 106 aaKnown RBP7.29□□□□□ -1.24
PVT1-216ENST00000523068 Q0VG73 95 aa7.29□□□□□ -1.24
PVT1-216ENST00000523068 RPL36ALQ969Q0 106 aaKnown RBP7.29□□□□□ -1.24
PVT1-216ENST00000523068 MRAP2Q96G30 205 aa7.29□□□□□ -1.24
PVT1-216ENST00000523068 PRELID3AQ96N28 172 aa7.29□□□□□ -1.24
PVT1-216ENST00000523068 ALKBH7Q9BT30 221 aaPredicted RBP7.29□□□□□ -1.24
PVT1-216ENST00000523068 Q9UF83 564 aa7.29□□□□□ -1.24
PVT1-216ENST00000523068 LAMTOR2Q9Y2Q5 125 aa7.29□□□□□ -1.24
PVT1-216ENST00000523068 ABCA13Q86UQ4 5058 aa7.28□□□□□ -1.24
PVT1-216ENST00000523068 TRBV7-3A0A075B6L6 115 aa7.28□□□□□ -1.24
PVT1-216ENST00000523068 IGLV5-52A0A0A0MRZ9 124 aa7.28□□□□□ -1.24
PVT1-216ENST00000523068 D6R8Y8 96 aa7.28□□□□□ -1.24
PVT1-216ENST00000523068 MRPL51Q4U2R6 128 aaKnown RBP7.28□□□□□ -1.24
PVT1-216ENST00000523068 COA6Q5JTJ3 125 aaKnown RBP7.28□□□□□ -1.24
PVT1-216ENST00000523068 Q8N814 137 aa7.28□□□□□ -1.24
PVT1-216ENST00000523068 COX11Q9Y6N1 276 aa7.28□□□□□ -1.24
PVT1-216ENST00000523068 C5orf52A6NGY3 159 aa7.27□□□□□ -1.25
PVT1-216ENST00000523068 EPM2AB3EWF7 344 aa7.27□□□□□ -1.25
PVT1-216ENST00000523068 PPP1R17O96001 155 aa7.27□□□□□ -1.25
PVT1-216ENST00000523068 RAB4AP20338 218 aa7.27□□□□□ -1.25
PVT1-216ENST00000523068 KRTAP10-1P60331 282 aa7.27□□□□□ -1.25
PVT1-216ENST00000523068 ZNF56Q15929 161 aa7.27□□□□□ -1.25
PVT1-216ENST00000523068 DAZ4Q86SG3 579 aaKnown RBP7.27□□□□□ -1.25
PVT1-216ENST00000523068 C18orf32Q8TCD1 76 aa7.27□□□□□ -1.25
PVT1-216ENST00000523068 RMI2Q96E14 147 aa7.27□□□□□ -1.25
PVT1-216ENST00000523068 RNF185Q96GF1 192 aa7.27□□□□□ -1.25
PVT1-216ENST00000523068 CHCHD7Q9BUK0 85 aa7.27□□□□□ -1.25
PVT1-216ENST00000523068 DAZ3Q9NR90 486 aaKnown RBP7.27□□□□□ -1.25
PVT1-216ENST00000523068 A0A087WX48 190 aa7.26□□□□□ -1.25
PVT1-216ENST00000523068 F5H697 171 aa7.26□□□□□ -1.25
PVT1-216ENST00000523068 XGP55808 180 aa7.26□□□□□ -1.25
PVT1-216ENST00000523068 UBE2D3P61077 147 aa7.26□□□□□ -1.25
PVT1-216ENST00000523068 UBE2D2P62837 147 aa7.26□□□□□ -1.25
PVT1-216ENST00000523068 FA2HQ7L5A8 372 aa7.26□□□□□ -1.25
PVT1-216ENST00000523068 NIT1Q86X76 327 aa7.26□□□□□ -1.25
PVT1-216ENST00000523068 Q8N3U1 123 aa7.26□□□□□ -1.25
PVT1-216ENST00000523068 MAP1LC3AQ9H492 121 aa7.26□□□□□ -1.25
PVT1-216ENST00000523068 H7C1H1 209 aa7.25□□□□□ -1.25
PVT1-216ENST00000523068 SERF1AO75920 110 aa7.25□□□□□ -1.25
PVT1-216ENST00000523068 NCR2O95944 276 aa7.25□□□□□ -1.25
PVT1-216ENST00000523068 IQCJQ1A5X6 159 aa7.25□□□□□ -1.25
PVT1-216ENST00000523068 RNASEKQ6P5S7 137 aaKnown RBP7.25□□□□□ -1.25
PVT1-216ENST00000523068 LINC00528Q8N1L1 170 aa7.25□□□□□ -1.25
PVT1-216ENST00000523068 PRSS3P2Q8NHM4 247 aa7.25□□□□□ -1.25
PVT1-216ENST00000523068 TMEM18Q96B42 140 aa7.25□□□□□ -1.25
PVT1-216ENST00000523068 SMKR1H3BMG3 65 aa7.24□□□□□ -1.25
PVT1-216ENST00000523068 HSBP1O75506 76 aa7.24□□□□□ -1.25
PVT1-216ENST00000523068 TNFRSF6BO95407 300 aa7.24□□□□□ -1.25
PVT1-216ENST00000523068 PMCHP20382 165 aa7.24□□□□□ -1.25
PVT1-216ENST00000523068 PDZD11Q5EBL8 140 aa7.24□□□□□ -1.25
PVT1-216ENST00000523068 HIST3H2BBQ8N257 126 aa7.24□□□□□ -1.25
PVT1-216ENST00000523068 CHCHD1Q96BP2 118 aaKnown RBP7.24□□□□□ -1.25
PVT1-216ENST00000523068 TMEM70Q9BUB7 260 aa7.24□□□□□ -1.25
PVT1-216ENST00000523068 TRBV6-8A0A0A6YYG3 113 aa7.23□□□□□ -1.25
PVT1-216ENST00000523068 LOC105371267A0A1B0GV96 52 aa7.23□□□□□ -1.25
PVT1-216ENST00000523068 NPYP01303 97 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms