RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 MBD6Q96DN6 1003 aa12.26□□□□□ -0.45
USP42-207ENST00000521713 F8W735 103 aaPredicted RBP12.26□□□□□ -0.45
USP42-207ENST00000521713 COX7B2Q8TF08 81 aa12.25□□□□□ -0.45
USP42-207ENST00000521713 DEFB114Q30KQ6 69 aa12.25□□□□□ -0.45
USP42-207ENST00000521713 VSIG2Q96IQ7 327 aa12.25□□□□□ -0.45
USP42-207ENST00000521713 ODF3Q96PU9 254 aa12.25□□□□□ -0.45
USP42-207ENST00000521713 EIF4EBP1Q13541 118 aaPredicted RBP12.25□□□□□ -0.45
USP42-207ENST00000521713 PRO0255Q9UI72 69 aa12.25□□□□□ -0.45
USP42-207ENST00000521713 ATP5EP2Q5VTU8 51 aa12.25□□□□□ -0.45
USP42-207ENST00000521713 SORL1Q92673 2214 aa12.24□□□□□ -0.45
USP42-207ENST00000521713 PSMG3-AS1Q96PY0 264 aa12.24□□□□□ -0.45
USP42-207ENST00000521713 K7EQG2 157 aa12.24□□□□□ -0.45
USP42-207ENST00000521713 TMEM256-PLSCR3K7ERE1 68 aa12.24□□□□□ -0.45
USP42-207ENST00000521713 MIAQ16674 131 aa12.24□□□□□ -0.45
USP42-207ENST00000521713 C1orf229Q6ZS94 237 aaPredicted RBP12.23□□□□□ -0.45
USP42-207ENST00000521713 ESM1Q9NQ30 184 aa12.23□□□□□ -0.45
USP42-207ENST00000521713 DEFB1P60022 68 aa12.23□□□□□ -0.45
USP42-207ENST00000521713 C5orf38Q86SI9 138 aa12.23□□□□□ -0.45
USP42-207ENST00000521713 CLEC2BQ92478 149 aa12.23□□□□□ -0.45
USP42-207ENST00000521713 C3orf22Q8N5N4 141 aa12.23□□□□□ -0.45
USP42-207ENST00000521713 MLST8Q9BVC4 326 aa12.23□□□□□ -0.45
USP42-207ENST00000521713 IMUPQ9GZP8 106 aa12.23□□□□□ -0.45
USP42-207ENST00000521713 TRBV10-1A0A0K0K1A3 114 aa12.23□□□□□ -0.45
USP42-207ENST00000521713 CDSNQ15517 529 aa12.23□□□□□ -0.45
USP42-207ENST00000521713 CHD8Q9HCK8 2581 aa12.23□□□□□ -0.45
USP42-207ENST00000521713 SMIM9A6NGZ8 99 aa12.22□□□□□ -0.45
USP42-207ENST00000521713 COX7A2LO14548 114 aa12.22□□□□□ -0.45
USP42-207ENST00000521713 RPL39P62891 51 aaKnown RBP12.22□□□□□ -0.45
USP42-207ENST00000521713 UBE2BP63146 152 aa12.22□□□□□ -0.45
USP42-207ENST00000521713 NREPQ16612 68 aa12.22□□□□□ -0.45
USP42-207ENST00000521713 CXCL5P42830 114 aa12.22□□□□□ -0.45
USP42-207ENST00000521713 HILS1P60008 231 aa12.22□□□□□ -0.45
USP42-207ENST00000521713 IGHV3-30P01768 117 aa12.22□□□□□ -0.45
USP42-207ENST00000521713 IGHV3-33P01772 117 aa12.22□□□□□ -0.45
USP42-207ENST00000521713 P0DMU3 169 aa12.22□□□□□ -0.45
USP42-207ENST00000521713 FAM231AP0DMU4 169 aa12.22□□□□□ -0.45
USP42-207ENST00000521713 FAM231CP0DMU5 169 aa12.22□□□□□ -0.45
USP42-207ENST00000521713 IGHV3-30-3P0DP02 117 aa12.22□□□□□ -0.45
USP42-207ENST00000521713 IGHV3-30-5P0DP03 117 aa12.22□□□□□ -0.45
USP42-207ENST00000521713 MDFICQ9P1T7 246 aa12.22□□□□□ -0.45
USP42-207ENST00000521713 LECT2O14960 151 aa12.21□□□□□ -0.45
USP42-207ENST00000521713 C20orf203Q8NBC4 194 aa12.21□□□□□ -0.45
USP42-207ENST00000521713 CAMK2N2Q96S95 79 aa12.21□□□□□ -0.45
USP42-207ENST00000521713 TP53TG3Q9ULZ0 132 aa12.21□□□□□ -0.45
USP42-207ENST00000521713 PRRC2AP48634 2157 aaKnown RBP12.21□□□□□ -0.45
USP42-207ENST00000521713 DEFB4AO15263 64 aa12.21□□□□□ -0.45
USP42-207ENST00000521713 GDF5OSQ5U4N7 250 aa12.21□□□□□ -0.45
USP42-207ENST00000521713 LRP4O75096 1905 aa12.21□□□□□ -0.45
USP42-207ENST00000521713 ANKRD11Q6UB99 2663 aaPredicted RBP12.21□□□□□ -0.46
USP42-207ENST00000521713 COL5A1P20908 1838 aaPredicted RBP12.2□□□□□ -0.46
USP42-207ENST00000521713 Q8N6K4 173 aa12.19□□□□□ -0.46
USP42-207ENST00000521713 WFDC9Q8NEX5 89 aa12.19□□□□□ -0.46
USP42-207ENST00000521713 C11orf45Q8TAV5 145 aa12.19□□□□□ -0.46
USP42-207ENST00000521713 LINC01006Q8NI28 216 aa12.19□□□□□ -0.46
USP42-207ENST00000521713 IGLC6P0CF74 106 aa12.18□□□□□ -0.46
USP42-207ENST00000521713 ZNF702PQ9H963 129 aa12.18□□□□□ -0.46
USP42-207ENST00000521713 IGLV10-54A0A075B6I4 117 aa12.18□□□□□ -0.46
USP42-207ENST00000521713 ZNF295-AS1Q8N0V1 137 aa12.18□□□□□ -0.46
USP42-207ENST00000521713 BRK1Q8WUW1 75 aa12.18□□□□□ -0.46
USP42-207ENST00000521713 ARHGAP21Q5T5U3 1957 aa12.17□□□□□ -0.46
USP42-207ENST00000521713 FAM236DA0A1B0GTK5 79 aa12.17□□□□□ -0.46
USP42-207ENST00000521713 FAM236CP0DP71 79 aa12.17□□□□□ -0.46
USP42-207ENST00000521713 LYRM9A8MSI8 78 aa12.17□□□□□ -0.46
USP42-207ENST00000521713 HIST2H2BDQ6DRA6 164 aa12.17□□□□□ -0.46
USP42-207ENST00000521713 TRBV30A0A0K0K1B3 111 aa12.16□□□□□ -0.46
USP42-207ENST00000521713 NEXN-AS1Q8NBZ9 246 aa12.16□□□□□ -0.46
USP42-207ENST00000521713 A0A0J9YXY3 114 aa12.16□□□□□ -0.46
USP42-207ENST00000521713 ZFAND3Q9H8U3 227 aa12.16□□□□□ -0.46
USP42-207ENST00000521713 NACAE9PAV3 2078 aa12.16□□□□□ -0.46
USP42-207ENST00000521713 U3KQK5 164 aa12.15□□□□□ -0.46
USP42-207ENST00000521713 JMJD1CQ15652 2540 aa12.15□□□□□ -0.46
USP42-207ENST00000521713 ATP5EP56381 51 aaPredicted RBP12.15□□□□□ -0.46
USP42-207ENST00000521713 TEX49A0A1B0GTD5 131 aa12.14□□□□□ -0.47
USP42-207ENST00000521713 DAND5Q8N907 189 aa12.14□□□□□ -0.47
USP42-207ENST00000521713 TP73-AS1Q9UF72 201 aa12.14□□□□□ -0.47
USP42-207ENST00000521713 LINC00322Q6ZN03 302 aaPredicted RBP12.14□□□□□ -0.47
USP42-207ENST00000521713 ETDCA0A1B0GVM5 59 aa12.13□□□□□ -0.47
USP42-207ENST00000521713 NDUFA1O15239 70 aa12.13□□□□□ -0.47
USP42-207ENST00000521713 ZFYVE26Q68DK2 2539 aa12.13□□□□□ -0.47
USP42-207ENST00000521713 NDUFA7O95182 113 aa12.13□□□□□ -0.47
USP42-207ENST00000521713 RPL18AQ02543 176 aaKnown RBP12.13□□□□□ -0.47
USP42-207ENST00000521713 HIGD2BQ4VC39 106 aa12.13□□□□□ -0.47
USP42-207ENST00000521713 NFE4Q86UQ8 179 aa12.13□□□□□ -0.47
USP42-207ENST00000521713 KLK12Q9UKR0 248 aa12.13□□□□□ -0.47
USP42-207ENST00000521713 C2orf91Q6ZV80 131 aa12.12□□□□□ -0.47
USP42-207ENST00000521713 MIR7-3HGQ8N6C7 128 aa12.12□□□□□ -0.47
USP42-207ENST00000521713 Q6Q795 121 aa12.12□□□□□ -0.47
USP42-207ENST00000521713 C10orf99Q6UWK7 81 aa12.12□□□□□ -0.47
USP42-207ENST00000521713 UPK3BQ9BT76 320 aa12.12□□□□□ -0.47
USP42-207ENST00000521713 FAM222AQ5U5X8 452 aa12.12□□□□□ -0.47
USP42-207ENST00000521713 NDUFB1O75438 58 aa12.11□□□□□ -0.47
USP42-207ENST00000521713 MIFP14174 115 aa12.11□□□□□ -0.47
USP42-207ENST00000521713 C14orf132Q9NPU4 83 aa12.11□□□□□ -0.47
USP42-207ENST00000521713 SPTBN4Q9H254 2564 aa12.11□□□□□ -0.47
USP42-207ENST00000521713 NDUFC2-KCTD14E9PQ53 114 aa12.11□□□□□ -0.47
USP42-207ENST00000521713 CFAP126Q5VTH2 177 aa12.11□□□□□ -0.47
USP42-207ENST00000521713 FAM240AA0A1B0GVK7 77 aa12.11□□□□□ -0.47
USP42-207ENST00000521713 NDUFC1O43677 76 aa12.11□□□□□ -0.47
USP42-207ENST00000521713 KRTAP10-9P60411 292 aa12.11□□□□□ -0.47
USP42-207ENST00000521713 DIRC1Q969H9 104 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms